SSDB Best Search Result

Entry:amr:AM1_2292 (688 a.a.)
Name:DNA polymerase III gamma and tau subunits
KO:K02343 DNA polymerase III subunit gamma/tau

Search Result : 213 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ana:alr4932 DNA polymerase III gamma and tau subunits   K02343     655     2015     0.501      713     
npu:Npun_F4123 DNA polymerase III, subunits gamma and t K02343     707     1996     0.485      715     
syf:Synpcc7942_0912 DNA polymerase III, tau subunit     K02343     652     1930     0.493      728     
syc:syc0630_c DNA polymerase III gamma and tau subunits K02343     652     1930     0.493      728     
tel:tlr1132 DNA polymerase III gamma and tau subunits   K02343     603     1898     0.496      687     
gvi:glr1609 ORF_ID:glr1609                              K02343     632     1809     0.468      692     
pma:Pro_1818 DNA polymerase III gamma/tau subunit       K02343     559     1406     0.584      358     
syn:sll1360 DNA polymerase III subunit                  K02343    1116     1201     0.414      618     
ksk:KSE_36680 putative DNA polymerase III subunit gamma K02343     738     1163     0.321      717     
mab:MAB_0309 DNA polymerase III, subunit gamma/tau      K02343     679     1097     0.338      672     
rha:RHA1_ro04199 DNA polymerase III subunit             K02343     753     1082     0.332      713     
pst:PSPTO_3646 DNA polymerase III, subunits gamma and t K02343     743     1037     0.367      562     
sct:SCAT_2949 DNA polymerase III subunit gamma          K02343     740     1031     0.320      716     
rso:RSc1191 probable dna polymerase III (subunits tau a K02343     728     1020     0.320      738     
sgr:SGR_3858 putative DNA polymerase III gamma subunit  K02343     748     1019     0.320      694     
ppu:PP_4269 DNA polymerase III, gamma subunit           K02343     691     1018     0.373      512     
cau:Caur_0523 DNA polymerase III, subunits gamma and ta K02343     609     1017     0.396      462     
mta:Moth_0027 DNA polymerase III, subunits gamma and ta K02343     589     1011     0.348      606     
msm:MSMEG_6285 DNA polymerase III gamma/tau subunit     K02343     665     1007     0.318      670     
psb:Psyr_1825 DNA polymerase III, tau subunit           K02343     736     1006     0.356      548     
xcc:XCC1001 DNA polymerase III tau and gamma subunits   K02343     653      996     0.355      560     
vvu:VV1_2003 DNA polymerase III, subunits gamma and tau K02343     734      990     0.360      528     
nme:NMB1443 DNA polymerase III, subunits gamma and tau  K02343     704      985     0.355      558     
bce:BC0024 DNA polymerase III subunit gamma/tau         K02343     562      983     0.363      452     
sgu:SGLAU_16360 DNA polymerase subunit                  K02343     842      981     0.355      530     
pae:PA1532 DNA polymerase III subunits gamma/tau        K02343     681      974     0.345      576     
bpe:BP1549 DNA polymerase III subunit Tau               K02343     696      970     0.365      520     
lcb:LCABL_24450 DNA-directed DNA polymerase III, gamma/ K02343     565      969     0.406      411     
ban:BA_0019 DNA polymerase III, gamma and tau subunit   K02343     562      969     0.367      430     
bsu:BSU00190 DNA polymerase III subunit gamma/tau       K02343     563      968     0.368      457     
ngo:NGO_0743 DNA polymerase III subunits gamma and tau  K02343     707      967     0.351      552     
efa:EF2781 DNA polymerase III, gamma and tau subunits   K02343     586      966     0.380      489     
acb:A1S_2056 DNA polymerase III tau and gamma subunits  K02343     702      961     0.362      522     
gsu:GSU0094 DNA polymerase III, gamma and tau subunits  K02343     579      960     0.379      456     
btk:BT9727_0019 DNA polymerase III, gamma and tau subun K02343     562      959     0.365      430     
dvu:DVU_3198 DNA polymerase III, gamma and tau subunits K02343     616      957     0.362      503     
xac:XAC1109 DNA polymerase III tau and gamma subunits   K02343     689      951     0.352      549     
lmo:lmo2704 DNA polymerase III subunit gamma/tau        K02343     579      949     0.395      423     
lin:dnaX highly similar to DNA polymerase III (gamma an K02343     579      948     0.428      367     
ecs:ECs_0523 DNA polymerase III/DNA elongation factor I K02343     643      948     0.336      610     
ece:Z0587 DNA polymerase III, tau and gamma subunits; D K02343     643      948     0.336      610     
eco:b0470 DNA polymerase III subunit tau                K02343     643      945     0.336      610     
ecj:JW0459 DNA polymerase III/DNA elongation factor III K02343     643      945     0.336      610     
cdf:CD630_00160 DNA polymerase III subunits gamma and t K02343     545      944     0.407      356     
cpe:CPE0045 DNA polymerase III gamma and tau subunits   K02343     547      940     0.406      360     
rru:Rru_A3473 DNA-directed DNA polymerase               K02343     659      939     0.367      471     
xom:XOO0964 DNA polymerase III tau and gamma subunits   K02343     698      936     0.342      532     
smar:SM39_0456 DNA polymerase III/DNA elongation factor K02343     652      932     0.353      515     
reh:H16_A2389 DNA polymerase III tau/gamma subunit      K02343     784      932     0.314      682     
sfl:SF0415 DNA polymerase III subunits gamma and tau    K02343     641      932     0.334      610     
cgl:Cgl0242 DNA polymerase III, gamma/tau subunits      K02343     775      930     0.299      679     
sty:STY0528 DNA polymerase III subunits gamma and tau   K02343     642      927     0.321      610     
sau:SA0436 DNA polymerase III gamma and tau subunits    K02343     565      927     0.385      408     
ddd:Dda3937_03291 DNA polymerase III/DNA elongation fac K02343     672      925     0.383      449     
vfi:VF_1687 DNA polymerase III/DNA elongation factor II K02343     708      923     0.352      488     
cro:ROD_05281 DNA polymerase III subunits gamma and tau K02343     643      922     0.324      605     
seo:STM14_0569 DNA polymerase III subunits gamma and ta K02343     642      920     0.320      610     
stm:STM0484 DNA polymerase III, tau and gamma subunits  K02343     642      920     0.320      610     
kpn:KPN_00452 DNA polymerase III subunits gamma and tau K02343     635      919     0.330      606     
vpa:VP2179 DNA polymerase III, subunits gamma and tau   K02343     711      916     0.346      491     
lpl:lp_0698 DNA-directed DNA polymerase III, gamma/tau  K02343     565      913     0.385      447     
ser:SERP0114 DNA polymerase III, gamma and tau subunits K02343     568      909     0.403      392     
cac:CA_C0125 DNA-directed DNA polymerase, III chain (dn K02343     542      908     0.352      409     
rsp:RSP_0710 DNA polymerase III subunits gamma and tau  K02343     582      907     0.371      445     
enc:ECL_01241 DNA polymerase III subunits gamma and tau K02343     637      906     0.324      592     
avn:Avin_19830 DNA-directed DNA polymerase III, gamma a K02343     694      906     0.339      543     
bps:BPSL1498 DNA polymerase III subunit gamma           K02343     825      906     0.304      685     
bth:BT_1610 DNA polymerase III subunit gamma/tau        K02343     619      906     0.362      431     
spn:SP_0865 DNA polymerase III, gamma and tau subunits  K02343     551      906     0.381      459     
pde:Pden_3649 DNA polymerase III, subunits gamma and ta K02343     592      905     0.403      417     
spr:spr0769 DNA-directed DNA polymerase III chain       K02343     551      904     0.381      459     
bfr:BF3231 DNA polymerase III subunit gamma/tau         K02343     614      903     0.355      456     
sao:SAOUHSC_00442 DNA polymerase III subunits gamma and K02343     557      902     0.383      399     
bma:BMA1361 DNA polymerase III, subunit gamma, putative K02343     825      902     0.307      683     
eca:ECA1176 DNA polymerase III subunit tau              K02343     691      900     0.336      536     
eba:ebA1203 DNA polymerase III (subunits tau and gamma) K02343     659      895     0.317      618     
sma:SAVERM_4150 putative DNA polymerase III gamma and t K02343     846      891     0.320      671     
amd:AMED_8918 DNA polymerase III subunit gamma/tau      K02343     730      889     0.310      704     
sco:SCO4067 DNA polymerase III subunit gamma            K02343     784      888     0.297      762     
yen:YE3093 DNA polymerase III subunit Tau (contains DNA K02343     656      882     0.329      578     
ljo:LJ_0423 DNA polymerase III subunit gamma/tau        K02343     602      882     0.358      492     
yps:YPTB0992 DNA polymerase III, tau and gamma subunits K02343     658      881     0.345      521     
ypk:y1060 DNA polymerase III, tau and gamma subunits    K02343     658      881     0.345      521     
ype:YPO3122 DNA polymerase III subunit Tau (contains DN K02343     658      881     0.345      521     
lla:L0279 DNA polymerase III, subunits beta and tau     K02343     552      881     0.381      420     
mlo:mlr5503 DNA polymerase III tau                      K02343     604      879     0.373      453     
mle:ML2335 DNA polymerase III, subunit [gamma/tau]      K02343     611      877     0.354      452     
cbo:CBO0031 DNA polymerase III subunit gamma/tau        K02343     541      875     0.378      360     
llm:llmg_2478 DNA polymerase III subunits gamma / tau   K02343     553      875     0.376      423     
cte:CT1324 DNA polymerase III, gamma and tau subunits   K02343     620      873     0.357      460     
son:SO_2013 DNA polymerase III gamma and tau subunits D K02343    1002      872     0.358      441     
eam:EAMY_1016 DNA polymerase III, tau and gamma subunit K02343     643      871     0.364      429     
cdi:DIP0259 DNA polymerase III subunit gamma/tau        K02343     707      871     0.303      699     
mca:MCA1328 DNA polymerase III, gamma and tau subunits  K02343     547      867     0.364      442     
bxe:Bxe_A2361 DNA-directed DNA polymerase               K02343     957      865     0.290      717     
bmf:BAB1_0031 Replication factor C conserved domain:ATP K02343     602      864     0.347      507     
vch:VC_1054 DNA polymerase III, subunits gamma and tau  K02343     692      864     0.319      577     
bme:BMEI1908 DNA polymerase iii subunits gamma and tau  K02343     602      864     0.347      507     
atu:Atu0096 DNA polymerase III, tau subunit             K02343     624      863     0.329      559     
blo:BL0500 DNA polymerase III subunit gamma/tau         K02343     970      857     0.289      712     
bja:bll8116 DNA polymerase III tau subunit              K02343     613      857     0.350      452     
bms:BR0034 DNA polymerase III, gamma and tau subunits   K02343     602      857     0.345      507     
rpa:TX73_003185 DNA polymerase III subunit gamma/tau    K02343     623      853     0.333      478     
zma:103651146 protein STICHEL isoform X1                          1174      850     0.361      427     
ret:RHE_CH00126 DNA polymerase III, tau subunit protein K02343     624      849     0.360      461     
mtu:Rv3721c DNA polymerase III subunit gamma/tau        K02343     578      848     0.369      425     
mtc:MT3824 DNA polymerase III, gamma and tau subunits   K02343     578      848     0.369      425     
spy:SPy_1364 DNA polymerase III subunits gamma / tau    K02343     556      847     0.409      359     
xfa:XF_1807 DNA polymerase III subunit                  K02343     608      846     0.357      434     
rle:RL0134 putative DNA polymerase III                  K02343     625      844     0.359      463     
tde:TDE_2586 DNA polymerase III, gamma and tau subunits K02343     612      838     0.346      488     
cpn:CPn_0040 DNA Polymerase III Gamma and Tau           K02343     442      837     0.363      430     
rcu:8262624 protein STICHEL                                       1280      832     0.369      404     
aci:ACIAD1970 DNA polymerase III, tau and gamma subunit K02343     711      830     0.367      455     
pmu:PM0364 DnaX                                         K02343     714      828     0.313      547     
osa:4351770 protein STICHEL                                       1174      827     0.381      362     
mdm:103442003 protein STICHEL                                     1275      826     0.303      608     
ctb:CTL0588 DNA polymerase III subunit gamma/tau        K02343     466      824     0.342      459     
mtr:25494362 protein STICHEL                                      1203      823     0.349      421     
apl:APL_0265 DNA polymerase III subunit gamma/tau       K02343     688      822     0.315      518     
smu:SMU_1581 DNA polymerase III, gamma/tau subunit      K02343     558      822     0.385      361     
ctr:CT_334 DNA polymerase III subunit gamma and tau     K02343     466      821     0.343      461     
lpn:lpg2754 DNA polymerase III subunits gamma and tau   K02343     556      817     0.339      446     
aae:aq_1855 DNA polymerase III gamma subunit            K02343     473      817     0.353      394     
vvi:100242129 protein STICHEL                                     1277      816     0.357      426     
hth:HTH_0431 DNA polymerase III gamma/tau subunit       K02343     483      814     0.349      392     
tth:TT_C1588 DNA polymerase III holoenzyme tau subunit  K02343     529      806     0.330      546     
hin:HI_1229 DNA polymerase III, subunits gamma and tau  K02343     688      804     0.326      516     
gmx:100814391 protein STICHEL                                     1240      802     0.369      393     
sme:SMc02905 Putative DNA polymerase III subunit TAU pr K02343     626      801     0.346      463     
dra:DR_2410 DNA polymerase III, tau/gamma subunit       K02343     615      799     0.299      665     
cit:102612331 protein STICHEL                                     1268      797     0.347      430     
sly:101254741 protein STICHEL                                     1273      797     0.372      390     
tpa:TP_1005 DNA polymerase III, subunits gamma and tau  K02343     572      796     0.356      421     
tma:TM0686 DNA polymerase III, gamma and tau subunit    K02343     478      789     0.422      325     
csv:101212356 protein STICHEL                                     1267      787     0.358      436     
hpy:HP_0717 DNA polymerase III gamma and tau subunits ( K02343     578      782     0.429      289     
hpj:jhp_0655 DNA POLYMERASE III SUBUNITS GAMMA AND TAU  K02343     582      776     0.429      289     
buc:BU481 DNA polymerase III subunits gamma and tau     K02343     361      773     0.376      362     
cje:Cj1157 DNA polymerase III subunits gamma and tau    K02343     509      768     0.369      350     
mpn:MPN_618 DnaX                                        K02343     681      767     0.327      532     
fps:FP0965 Probable DNA polymerase III subunit          K02343     361      764     0.387      354     
hdu:HD_1819 DNA polymerase III subunits gamma and tau   K02343     687      764     0.369      390     
bbu:BB_0461 DNA polymerase III, subunits gamma and tau  K02343     560      761     0.367      368     
vg:55600138 Nodularia phage vB_NpeS-2AV2; clamp loader             487      756     0.357      392     
wol:WD_1060 DNA polymerase III, gamma and tau subunits  K02343     533      754     0.343      420     
ccr:CC_0267 DNA polymerase III, gamma and tau subunits  K02343     608      750     0.431      290     
ath:AT2G02480 AAA-type ATPase family protein                      1218      743     0.362      365     
fnu:FN1830 DNA polymerase III subunits gamma and tau    K02343     484      741     0.382      306     
rco:RC1336 DNA polymerase III gamma and tau chains      K02343     509      724     0.445      265     
ftu:FTT_0190c DNA polymerase III, gamma/tau subunits    K02343     546      719     0.433      263     
rpr:RP865 DNA POLYMERASE III SUBUNITS GAMMA AND TAU (dn K02343     541      719     0.410      307     
lil:LA_4331 DNA polymerase III gamma subunit            K02343     479      701     0.336      369     
mge:MG_419 DNA polymerase III, subunit gamma and tau    K02343     597      657     0.409      259     
cre:CHLRE_06g303200v5 uncharacterized protein                     2574      423     0.284      306     
xtr:100036715 protein SON                               K23718    5561      383     0.341      305     
mcc:114677141 LOW QUALITY PROTEIN: basic proline-rich p            987      380     0.283      314     
ame:102654245 leucine-rich repeat extensin-like protein            412      377     0.278      281     
rno:134485870 basic proline-rich protein-like                      540      377     0.307      290     
mth:MTH_241 replication factor C, small subunit         K04801     321      374     0.277      364     
dre:141381807 uncharacterized protein                              520      358     0.305      298     
aag:5566335 titin homolog isoform X1                    K12567    4183      355     0.283      367     
mmp:MMP0427 Replication factor C, small subunit         K04801     315      351     0.275      276     
hsa:124907510 basic proline-rich protein-like                      643      349     0.264      295     
mmu:14404 gamma-aminobutyric acid (GABA) A receptor, su K05185     697      348     0.287      328     
afu:AF_2060 activator 1, replication factor C, 35 KD su K04801     319      348     0.295      275     
fca:123381365 LOW QUALITY PROTEIN: vegetative cell wall            459      345     0.293      300     
xla:108707872 uncharacterized protein LOC108707872                4909      345     0.303      373     
ocu:127489891 uncharacterized protein LOC127489891                 648      344     0.283      293     
pti:PHATRDRAFT_11922 hypothetical protein               K10756     338      343     0.298      282     
nmr:Nmar_0556 histidine kinase                                     826      342     0.308      227     
tbr:Tb927.7.4580 hypothetical protein, conserved                   574      337     0.260      315     
bmor:101747164 uncharacterized protein LOC101747164 iso            573      335     0.265      388     
kla:KLLA0_B06039g uncharacterized protein                          589      332     0.311      370     
cel:CELE_Y49E10.29 Prion-like-(Q/N-rich)-domain-bearing            559      332     0.246      516     
ola:101165073 zinc finger protein 185 isoform X1        K24423    1177      331     0.278      316     
dme:Dmel_CG15021 uncharacterized protein                           420      331     0.298      299     
ecb:100054946 replication factor C subunit 5            K10756     340      330     0.264      258     
aga:1281146 mucin-2 isoform X1                                    2104      329     0.270      378     
gga:424958 replication factor C subunit 4               K10755     359      329     0.293      263     
hvo:HVO_0203 replication factor C small subunit         K04801     327      327     0.269      283     
tca:656402 glycogenin-2                                            792      325     0.256      543     
mdo:100024656 proteoglycan 4                            K24286    1331      324     0.265      309     
ssc:106504063 replication factor C subunit 4 isoform X1 K10755     364      323     0.254      355     
bta:508389 replication factor C subunit 5               K10756     316      321     0.260      258     
cfa:612481 cyclin-K                                     K23326     582      320     0.277      375     
cne:CNE03390 hypothetical protein                                  498      318     0.283      325     
hma:rrnAC2565 replication factor C small subunit        K04801     345      318     0.263      270     
mgr:MGG_11009 hypothetical protein                                 348      317     0.261      394     
ape:APE_1522.1 replication factor C small subunit       K04801     325      315     0.278      255     
hal:VNG_2280G replication factor C small subunit        K04801     322      312     0.268      272     
spo:2541493 DNA replication factor C complex subunit Rf K10756     342      311     0.274      263     
tac:Ta1500 probable replication factor C, 40 KD subunit K04801     330      302     0.271      295     
lma:LMJF_27_0550 putative replication factor C, subunit K10755     360      301     0.261      310     
ddi:DDB_G0282235 replication factor C subunit           K10756     347      301     0.253      360     
sce:YJR068W replication factor C subunit 2              K10755     353      298     0.260      296     
afm:AFUA_1G10012 hypothetical protein                             1929      296     0.300      250     
mba:Mbar_A1582 replication factor C small subunit       K04801     334      293     0.306      216     
cal:CAALFM_C504000WA replication factor C subunit 3     K10756     347      293     0.250      324     
ani:ANIA_06284 hypothetical protein                                926      289     0.279      319     
pai:PAE0734 replication factor C small subunit          K04801     329      289     0.262      355     
ncr:NCU07438 WASP-like protein las17p                   K23612     636      288     0.356      146     
pfa:PF3D7_0218000 replication factor C subunit 2, putat K10755     330      287     0.241      299     
tps:THAPSDRAFT_723 replication factor C 36 kDa subunit  K10756     321      285     0.255      282     
aor:AO090120000229 unnamed protein product; predicted p            551      285     0.269      323     
sai:Saci_0907 replication factor C                      K04801     325      285     0.273      249     
fgr:FGSG_00592 hypothetical protein                                944      283     0.276      359     
sso:SSO0768 Activator 1, replication factor C, small su K04801     330      271     0.257      269     
pfu:PF0093 replication factor C, small subunit          K04801     852      241     0.310      171     
tko:TK2218 replication factor C, small subunit          K04801     866      240     0.321      156     
ag:AAG02365 nonribosomal peptide synthetase protein Blm K16113     935      214     0.397      116     
mja:MJ_1422 activator 1 (replication factor C), 35 KD s K04801    1847      163     0.315      89      
vp:919920-13 Enterovirus C precursor polypeptide 2BC               426      122     0.242      194     

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