KEGG   PATHWAY: pps05135
Entry
pps05135                    Pathway                                
Name
Yersinia infection - Pan paniscus (bonobo)
Description
Pathogenic Yersinia injects virulent Yersinia outer proteins (Yops) into the host cell through a type three secretion system (T3SS) to express its pathogenicity. Through inactivation of small GTPases by YopT protease, YopE GTPase-activating protein, and YpkA/YopO sequestration of GDP-bound small GTPases, Yersinia prevents its uptake by phagocytic cells and disrupts the actin cytoskeleton. YopH phosphatase shuts down phagocytosis by dephosphorylating key host proteins as well as suppresses T cell activation. Yersinia induces macrophage pyroptosis via YopB/YopD activation of canonical and noncanonical inflammasomes and YopT/YopE-mediated activation of pyrin. These effects are counteracted by YopK and YopM. YopP/J is a member of an ubiquitin-like protein cysteine protease family and simultaneously targets signaling components of the MAPK and NF-kappaB signaling pathways following activation of Toll-like receptor4 to inhibit production of proinflammatory cytokines.
Class
Human Diseases; Infectious disease: bacterial
Pathway map
pps05135  Yersinia infection
pps05135

Organism
Pan paniscus (bonobo) [GN:pps]
Gene
100992555  FN1; fibronectin isoform X4 [KO:K05717]
100983460  ITGA4; integrin alpha-4 isoform X1 [KO:K06483]
100968295  ITGA5; integrin alpha-5 [KO:K06484]
100992059  ITGB1; integrin beta-1 [KO:K05719]
100990168  RHOG; rho-related GTP-binding protein RhoG [KO:K07863]
100986423  SRC; proto-oncogene tyrosine-protein kinase Src isoform X1 [KO:K05704] [EC:2.7.10.2]
100989953  PTK2; focal adhesion kinase 1 isoform X1 [KO:K05725] [EC:2.7.10.2]
100991936  PTK2B; protein-tyrosine kinase 2-beta isoform X1 [KO:K05871] [EC:2.7.10.2]
100973798  CRKL; crk-like protein [KO:K04438]
100976587  CRK; adapter molecule crk isoform X1 [KO:K04438]
100980143  BCAR1; breast cancer anti-estrogen resistance protein 1 isoform X14 [KO:K05726]
100995273  ELMO1; engulfment and cell motility protein 1 isoform X2 [KO:K12366]
100974608  ELMO2; engulfment and cell motility protein 2 isoform X2 [KO:K18985]
100971564  DOCK1; dedicator of cytokinesis protein 1 isoform X1 [KO:K13708]
117975722  uncharacterized protein LOC117975722 [KO:K06856]
100991644  FCGR2A; low affinity immunoglobulin gamma Fc region receptor II-a isoform X1 [KO:K06472]
100989777  ras-related C3 botulinum toxin substrate 1 [KO:K04392]
100976112  RAC1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
100993959  RAC2; ras-related C3 botulinum toxin substrate 2 [KO:K07860]
100988790  RAC3; ras-related C3 botulinum toxin substrate 3 isoform X1 [KO:K07861]
100994510  PIP5K1A; phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X3 [KO:K00889] [EC:2.7.1.68]
100982914  PIP5K1B; phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1 [KO:K00889] [EC:2.7.1.68]
100990998  putative PIP5K1A and PSMD4-like protein [KO:K00889] [EC:2.7.1.68]
100976973  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like [KO:K00889] [EC:2.7.1.68]
100975341  PIP5K1C; phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1 [KO:K00889] [EC:2.7.1.68]
100982400  ARF6; ADP-ribosylation factor 6 [KO:K07941]
100988895  WASL; neural Wiskott-Aldrich syndrome protein [KO:K23612]
100984419  ACTR2; actin-related protein 2 isoform X2 [KO:K17260]
100991091  ACTR3; actin-related protein 3 [KO:K18584]
106635013  ACTR3C; actin-related protein 3C isoform X1 [KO:K18584]
117981155  ACTR3B; actin-related protein 3B isoform X1 [KO:K18584]
100979355  ARPC1A; actin-related protein 2/3 complex subunit 1A [KO:K05757]
100975648  ARPC1B; actin-related protein 2/3 complex subunit 1B [KO:K05757]
100981873  ARPC2; actin-related protein 2/3 complex subunit 2 [KO:K05758]
100973986  ARPC3; actin-related protein 2/3 complex subunit 3 [KO:K05756]
100984731  actin-related protein 2/3 complex subunit 3-like [KO:K05756]
100968230  ARPC4; actin-related protein 2/3 complex subunit 4 isoform X2 [KO:K05755]
100991419  ARPC5L; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754]
100967312  ARPC5; actin-related protein 2/3 complex subunit 5 [KO:K05754]
100970542  ACTG1; actin, cytoplasmic 2 [KO:K05692]
100990579  actin, cytoplasmic 1 [KO:K05692]
103784606  actin, alpha skeletal muscle-like [KO:K05692]
100987964  LOW QUALITY PROTEIN: actin-like [KO:K05692]
100980855  WIPF2; WAS/WASL-interacting protein family member 2 [KO:K19475]
100987142  WIPF1; WAS/WASL-interacting protein family member 1 [KO:K19475]
100978481  WIPF3; WAS/WASL-interacting protein family member 3 [KO:K19475]
100974306  BAIAP2; brain-specific angiogenesis inhibitor 1-associated protein 2 isoform X1 [KO:K05627]
100979214  WASF2; wiskott-Aldrich syndrome protein family member 2 [KO:K05748]
100994236  wiskott-Aldrich syndrome protein family member 2-like [KO:K05748]
100972364  PXN; paxillin isoform X11 [KO:K05760]
100980171  GIT2; ARF GTPase-activating protein GIT2 isoform X3 [KO:K12487]
100981749  ARHGEF7; rho guanine nucleotide exchange factor 7 isoform X7 [KO:K13710]
100993131  cell division control protein 42 homolog [KO:K04393]
100990246  CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393]
100977168  WAS; wiskott-Aldrich syndrome protein [KO:K05747]
100986730  GNAQ; guanine nucleotide-binding protein G(q) subunit alpha isoform X1 [KO:K04634]
100981550  ARHGEF12; rho guanine nucleotide exchange factor 12 isoform X1 [KO:K07532]
100972918  ARHGEF1; rho guanine nucleotide exchange factor 1 isoform X4 [KO:K12330]
100995133  ARHGEF28; rho guanine nucleotide exchange factor 28 isoform X2 [KO:K21072]
100995642  RHOA; transforming protein RhoA [KO:K04513]
100976232  ROCK1; rho-associated protein kinase 1 isoform X1 [KO:K04514] [EC:2.7.11.1]
100969111  ROCK2; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
100973132  FYB1; FYN-binding protein 1 isoform X3 [KO:K17698]
100981468  SKAP2; src kinase-associated phosphoprotein 2 [KO:K23471]
100984425  NLRP3; NACHT, LRR and PYD domains-containing protein 3 [KO:K12800]
100977377  NLRC4; NLR family CARD domain-containing protein 4 [KO:K12805]
100972885  PKN1; serine/threonine-protein kinase N1 isoform X3 [KO:K06071] [EC:2.7.11.13]
100992814  PKN2; serine/threonine-protein kinase N2 isoform X1 [KO:K23691] [EC:2.7.11.13]
100970504  RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1 [KO:K04373] [EC:2.7.11.1]
100986115  RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X5 [KO:K04373] [EC:2.7.11.1]
100971242  RPS6KA2; ribosomal protein S6 kinase alpha-2 isoform X3 [KO:K04373] [EC:2.7.11.1]
100967605  RPS6KA6; ribosomal protein S6 kinase alpha-6 isoform X2 [KO:K04373] [EC:2.7.11.1]
100975882  MEFV; pyrin [KO:K12803]
100973055  LIMK1; LIM domain kinase 1 [KO:K05743] [EC:2.7.11.1]
100991103  PYCARD; apoptosis-associated speck-like protein containing a CARD isoform X1 [KO:K12799]
100986637  CASP1; caspase-1 isoform X1 [KO:K01370] [EC:3.4.22.36]
100985633  LOW QUALITY PROTEIN: caspase-1 [KO:K01370] [EC:3.4.22.36]
100971499  IL18; interleukin-18 isoform X1 [KO:K05482]
100993613  IL1B; interleukin-1 beta [KO:K04519]
100980644  TLR4; toll-like receptor 4 precursor [KO:K10160]
100996159  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
100968191  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
100981891  IRAK1; interleukin-1 receptor-associated kinase 1 isoform X1 [KO:K04730] [EC:2.7.11.1]
100983960  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
100982095  TRAF2; TNF receptor-associated factor 2 isoform X2 [KO:K03173] [EC:2.3.2.27]
100985128  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2 [KO:K04403]
100992480  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404]
100974026  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
100987483  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
117977645  NF-kappa-B essential modulator-like isoform X1 [KO:K07210]
100995228  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
100989390  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
100972867  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
100979341  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X3 [KO:K02580]
100988429  RELA; transcription factor p65 isoform X1 [KO:K04735]
100988422  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
100977025  dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
100988437  dual specificity mitogen-activated protein kinase kinase 2-like [KO:K04369] [EC:2.7.12.2]
100979542  MAPK3; mitogen-activated protein kinase 3 isoform X1 [KO:K04371] [EC:2.7.11.24]
100995567  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
100975020  LOW QUALITY PROTEIN: dual specificity mitogen-activated protein kinase kinase 3 [KO:K04432] [EC:2.7.12.2]
117978302  dual specificity mitogen-activated protein kinase kinase 3 isoform X1 [KO:K04432] [EC:2.7.12.2]
100972424  MAP2K6; dual specificity mitogen-activated protein kinase kinase 6 isoform X2 [KO:K04433] [EC:2.7.12.2]
100982544  MAPK13; mitogen-activated protein kinase 13 isoform X5 [KO:K04441] [EC:2.7.11.24]
100983649  MAPK14; mitogen-activated protein kinase 14 isoform X2 [KO:K04441] [EC:2.7.11.24]
100981268  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
100980937  MAPK11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
100991495  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X1 [KO:K04430] [EC:2.7.12.2]
100989537  MAP2K7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
100984173  MAPK10; mitogen-activated protein kinase 10 isoform X3 [KO:K04440] [EC:2.7.11.24]
100982480  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
100990080  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
100987957  FOS; proto-oncogene c-Fos [KO:K04379]
100980908  JUN; transcription factor AP-1 [KO:K04448]
100974002  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
100990211  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
100977114  IRF3; interferon regulatory factor 3 isoform X5 [KO:K05411]
100977674  TNF; tumor necrosis factor [KO:K03156]
100967827  IL6; interleukin-6 isoform X2 [KO:K05405]
100978369  CXCL8; interleukin-8 [KO:K10030]
100995851  IFNB1; interferon beta [KO:K05415]
100989732  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
100990828  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
100990108  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
100994315  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
100986080  PIK3R3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X2 [KO:K02649]
100969981  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
100969444  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
100991804  AKT2; RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
100969217  AKT3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
100972306  GSK3B; glycogen synthase kinase-3 beta isoform X2 [KO:K03083] [EC:2.7.11.26]
100981087  CCL2; C-C motif chemokine 2 [KO:K14624]
100970574  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
100968474  CD8A; T-cell surface glycoprotein CD8 alpha chain [KO:K06458]
100969045  CD8B; T-cell surface glycoprotein CD8 beta chain isoform X1 [KO:K06459]
100979670  LCK; tyrosine-protein kinase Lck isoform X3 [KO:K05856] [EC:2.7.10.2]
100995080  uncharacterized protein LOC100995080 [KO:K10785]
100971372  tyrosine-protein kinase ZAP-70 [KO:K07360] [EC:2.7.10.2]
100983902  LAT; linker for activation of T-cells family member 1 isoform X1 [KO:K07362]
100974736  LCP2; lymphocyte cytosolic protein 2 [KO:K07361]
100989733  VAV3; guanine nucleotide exchange factor VAV3 isoform X2 [KO:K05730]
100971161  VAV2; guanine nucleotide exchange factor VAV2 isoform X1 [KO:K05730]
100982766  VAV1; proto-oncogene vav isoform X1 [KO:K05730]
100995010  PLCG1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X1 [KO:K01116] [EC:3.1.4.11]
100974281  NFATC1; nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446]
117976776  LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1-like [KO:K04446]
100980286  NFATC2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X4 [KO:K17332]
100988212  NFATC3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
100984780  IL2; interleukin-2 [KO:K05429]
100990760  IL10; interleukin-10 [KO:K05443]
Compound
C00076  Calcium cation
C00338  Lipopolysaccharide
C01245  D-myo-Inositol 1,4,5-trisphosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Pha K, Navarro L
  Title
Yersinia type III effectors perturb host innate immune responses.
  Journal
World J Biol Chem 7:1-13 (2016)
DOI:10.4331/wjbc.v7.i1.1
Reference
  Authors
Pinaud L, Sansonetti PJ, Phalipon A
  Title
Host Cell Targeting by Enteropathogenic Bacteria T3SS Effectors.
  Journal
Trends Microbiol 26:266-283 (2018)
DOI:10.1016/j.tim.2018.01.010
Reference
  Authors
Huveneers S, Danen EH
  Title
Adhesion signaling - crosstalk between integrins, Src and Rho.
  Journal
J Cell Sci 122:1059-69 (2009)
DOI:10.1242/jcs.039446
Reference
  Authors
Angot A, Vergunst A, Genin S, Peeters N
  Title
Exploitation of eukaryotic ubiquitin signaling pathways by effectors translocated by bacterial type III and type IV secretion systems.
  Journal
PLoS Pathog 3:e3 (2007)
DOI:10.1371/journal.ppat.0030003
Reference
  Authors
Bliska JB
  Title
Yop effectors of Yersinia spp. and actin rearrangements.
  Journal
Trends Microbiol 8:205-8 (2000)
DOI:10.1016/S0966-842X(00)01738-8
Reference
  Authors
Gustavsson A, Yuan M, Fallman M
  Title
Temporal dissection of beta1-integrin signaling indicates a role for p130Cas-Crk in filopodia formation.
  Journal
J Biol Chem 279:22893-901 (2004)
DOI:10.1074/jbc.M309693200
Reference
  Authors
Bruce-Staskal PJ, Weidow CL, Gibson JJ, Bouton AH
  Title
Cas, Fak and Pyk2 function in diverse signaling cascades to promote Yersinia uptake.
  Journal
J Cell Sci 115:2689-700 (2002)
Reference
  Authors
McGee K, Zettl M, Way M, Fallman M
  Title
A role for N-WASP in invasin-promoted internalisation.
  Journal
FEBS Lett 509:59-65 (2001)
DOI:10.1016/S0014-5793(01)03139-8
Reference
  Authors
Pizarro-Cerda J, Cossart P
  Title
Subversion of phosphoinositide metabolism by intracellular bacterial pathogens.
  Journal
Nat Cell Biol 6:1026-33 (2004)
DOI:10.1038/ncb1104-1026
Reference
  Authors
Chung LK, Park YH, Zheng Y, Brodsky IE, Hearing P, Kastner DL, Chae JJ, Bliska JB
  Title
The Yersinia Virulence Factor YopM Hijacks Host Kinases to Inhibit Type III Effector-Triggered Activation of the Pyrin Inflammasome.
  Journal
Cell Host Microbe 20:296-306 (2016)
DOI:10.1016/j.chom.2016.07.018
Reference
  Authors
Schotte P, Denecker G, Van Den Broeke A, Vandenabeele P, Cornelis GR, Beyaert R
  Title
Targeting Rac1 by the Yersinia effector protein YopE inhibits caspase-1-mediated maturation and release of interleukin-1beta.
  Journal
J Biol Chem 279:25134-42 (2004)
DOI:10.1074/jbc.M401245200
Reference
  Authors
Orth K, Palmer LE, Bao ZQ, Stewart S, Rudolph AE, Bliska JB, Dixon JE
  Title
Inhibition of the mitogen-activated protein kinase kinase superfamily by a Yersinia effector.
  Journal
Science 285:1920-3 (1999)
DOI:10.1126/science.285.5435.1920
Reference
  Authors
Zhou H, Monack DM, Kayagaki N, Wertz I, Yin J, Wolf B, Dixit VM
  Title
Yersinia virulence factor YopJ acts as a deubiquitinase to inhibit NF-kappa B activation.
  Journal
J Exp Med 202:1327-32 (2005)
DOI:10.1084/jem.20051194
Reference
  Authors
Haase R, Richter K, Pfaffinger G, Courtois G, Ruckdeschel K
  Title
Yersinia outer protein P suppresses TGF-beta-activated kinase-1 activity to impair innate immune signaling in Yersinia enterocolitica-infected cells.
  Journal
J Immunol 175:8209-17 (2005)
DOI:10.4049/jimmunol.175.12.8209
Reference
  Authors
Thiefes A, Wolf A, Doerrie A, Grassl GA, Matsumoto K, Autenrieth I, Bohn E, Sakurai H, Niedenthal R, Resch K, Kracht M
  Title
The Yersinia enterocolitica effector YopP inhibits host cell signalling by inactivating the protein kinase TAK1 in the IL-1 signalling pathway.
  Journal
EMBO Rep 7:838-44 (2006)
DOI:10.1038/sj.embor.7400754
Reference
  Authors
Rosadini CV, Zanoni I, Odendall C, Green ER, Paczosa MK, Philip NH, Brodsky IE, Mecsas J, Kagan JC
  Title
A Single Bacterial Immune Evasion Strategy Dismantles Both MyD88 and TRIF Signaling Pathways Downstream of TLR4.
  Journal
Cell Host Microbe 18:682-93 (2015)
DOI:10.1016/j.chom.2015.11.006
Reference
  Authors
Rolan HG, Durand EA, Mecsas J
  Title
Identifying Yersinia YopH-targeted signal transduction pathways that impair neutrophil responses during in vivo murine infection.
  Journal
Cell Host Microbe 14:306-17 (2013)
DOI:10.1016/j.chom.2013.08.013
Reference
  Authors
Alonso A, Bottini N, Bruckner S, Rahmouni S, Williams S, Schoenberger SP, Mustelin T
  Title
Lck dephosphorylation at Tyr-394 and inhibition of T cell antigen receptor signaling by Yersinia phosphatase YopH.
  Journal
J Biol Chem 279:4922-8 (2004)
DOI:10.1074/jbc.M308978200
Related
pathway
pps04510  Focal adhesion
pps04620  Toll-like receptor signaling pathway
pps04621  NOD-like receptor signaling pathway
pps04660  T cell receptor signaling pathway
pps04666  Fc gamma R-mediated phagocytosis
pps04810  Regulation of actin cytoskeleton
KO pathway
ko05135   
LinkDB

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