GFIT result for
pdio
|
GFIT result for
pdio
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pdio:PDMSB3_1966 (933 a.a.) |
-- |
K01971 | ligD | ligD; 3'-phosphoesterase / DNA ligase D / DNA repair polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > bxb:DR64_32(1001) | 1001 | 89.7 | 5816 | 11 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bxe:Bxe_A2328(1001) | 1001 | 89.7 | 5816 | 12 | <> | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpy:Bphyt_1858(940) | 952 | 87.3 | 5508 | 3 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > parb:CJU94_15880(1057) | 1057 | 79.9 | 5410 | 53 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pts:CUJ90_07895(964) | 980 | 81.0 | 5211 | 10 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pgis:I6I06_04630(1049) | 1049 | 75.3 | 5083 | 25 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bfn:OI25_3429(921) | 944 | 79.7 | 5016 | 3 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pgp:CUJ91_08255(940) | 966 | 78.5 | 5010 | 8 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > buz:AYM40_11275(935) | 956 | 80.3 | 5006 | 6 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > buq:AC233_07635(932) | 967 | 78.3 | 4986 | 5 | <> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pkf:RW095_27480(?) | 1037 | 74.2 | 4970 | 0 | -- | - | |||
| > bgf:BC1003_1569(974) | 1003 | 76.3 | 4969 | 14 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcj:CUJ87_07560(1010) | 1033 | 74.2 | 4934 | 19 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpx:BUPH_02252(984) | 1016 | 74.6 | 4920 | 18 | <> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbry:NDK50_08830(1085) | 1085 | 71.4 | 4911 | 35 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bge:BC1002_1425(937) | 957 | 77.7 | 4891 | 3 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bug:BC1001_1735(984) | 1016 | 74.3 | 4885 | 22 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pspw:BJG93_05705(942) | 959 | 76.7 | 4882 | 6 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phs:C2L64_08955(958) | 972 | 73.0 | 4626 | 6 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pter:C2L65_08420(952) | 968 | 72.9 | 4601 | 4 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcai:K788_0007984(961) | 973 | 71.8 | 4575 | 5 | <> | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bph:Bphy_0981(954) | 967 | 71.7 | 4548 | 8 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psaa:QEN71_22140(?) | 959 | 71.7 | 4545 | 0 | -- | - | |||
| > pew:KZJ38_10265(997) | 992 | 69.4 | 4496 | 8 | <> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > para:BTO02_12435(966) | 977 | 69.8 | 4471 | 13 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > caba:SBC2_20570(967) | 978 | 67.8 | 4392 | 10 | <> | K01971 | ligD | lig_2; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bui:AX768_07915(941) | 957 | 68.5 | 4363 | 3 | <> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bum:AXG89_14040(941) | 957 | 68.4 | 4360 | 8 | <> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bue:BRPE67_ACDS15580(907) | 938 | 70.8 | 4355 | 3 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > byi:BYI23_A015080(904) | 936 | 70.7 | 4350 | 2 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > buo:BRPE64_ACDS15530(909) | 931 | 70.4 | 4344 | 4 | <> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cabk:NK8_15690(?) | 930 | 70.2 | 4311 | 0 | -- | - | |||
| > tcar:U0034_23375(?) | 947 | 67.1 | 4238 | 0 | -- | - | |||
| > bcew:DM40_5175(957) | 970 | 57.5 | 3614 | 16 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blat:WK25_16550(957) | 970 | 57.4 | 3614 | 8 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bvi:Bcep1808_5735(993) | 998 | 57.7 | 3610 | 28 | <- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bced:DM42_7098(948) | 964 | 58.1 | 3604 | 8 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pacs:FAZ98_32875(928) | 950 | 57.4 | 3598 | 26 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bceo:I35_7581(928) | 959 | 58.5 | 3577 | 7 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bmul:NP80_5544(926) | 953 | 57.8 | 3574 | 13 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bve:AK36_5227(995) | 999 | 57.1 | 3574 | 43 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > buk:MYA_5305(997) | 1002 | 57.5 | 3570 | 25 | <- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > btei:WS51_27065(938) | 965 | 57.7 | 3564 | 9 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bam:Bamb_5610(932) | 964 | 57.6 | 3562 | 6 | <- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bac:BamMC406_6340(949) | 979 | 56.8 | 3558 | 6 | <- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcm:Bcenmc03_6073(927) | 968 | 58.1 | 3551 | 6 | <- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bmk:DM80_5695(927) | 957 | 57.7 | 3548 | 11 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bch:Bcen2424_6483(936) | 967 | 57.7 | 3546 | 6 | <- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bmj:BMULJ_06021(927) | 957 | 57.7 | 3545 | 13 | <- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bmu:Bmul_5476(927) | 957 | 57.7 | 3545 | 14 | <- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bps:BPSS2211(1159) | 1158 | 52.5 | 3517 | 46 | <- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > but:X994_4842(1156) | 1118 | 53.3 | 3508 | 58 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcep:APZ15_36520(926) | 965 | 57.1 | 3507 | 11 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpd:BURPS668_A3112(1157) | 1156 | 52.2 | 3506 | 91 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpso:X996_5293(1154) | 1153 | 51.9 | 3502 | 72 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpz:BP1026B_II2379(1154) | 1116 | 53.0 | 3501 | 47 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsem:WJ12_16950(931) | 965 | 57.0 | 3501 | 14 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsa:BBU_3781(1149) | 1148 | 52.1 | 3500 | 49 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsd:BBX_4850(1160) | 1159 | 52.7 | 3500 | 54 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpse:BDL_5683(1160) | 1159 | 52.7 | 3500 | 59 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdf:WI26_27455(921) | 961 | 56.9 | 3496 | 8 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpl:BURPS1106A_A2988(1163) | 1125 | 52.6 | 3488 | 92 | <- | K01971 | ligD | DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpq:BPC006_II2938(1163) | 1125 | 52.6 | 3488 | 92 | <- | K01971 | ligD | DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsm:BBQ_3897(1163) | 1162 | 52.2 | 3487 | 66 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsu:BBN_5703(1163) | 1162 | 52.2 | 3487 | 66 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsh:DR55_5522(1167) | 1129 | 52.8 | 3483 | 57 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpk:BBK_4987(1161) | 1160 | 52.2 | 3479 | 69 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bstg:WT74_19350(962) | 984 | 55.3 | 3476 | 13 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bmec:WJ16_17055(911) | 968 | 56.7 | 3466 | 5 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptro:G5S35_28720(881) | 927 | 57.1 | 3460 | 3 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcon:NL30_32850(918) | 973 | 55.8 | 3432 | 7 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsl:WS57_15615(888) | 960 | 57.0 | 3415 | 8 | <- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdl:AK34_5177(914) | 981 | 54.6 | 3407 | 8 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcen:DM39_7047(888) | 960 | 56.4 | 3396 | 4 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpla:bpln_1g10960(932) | 964 | 54.5 | 3217 | 62 | <- | K01971 | ligD | DNA primase small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rwe:KOL96_10585(867) | 941 | 54.3 | 3186 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rmn:TK49_07020(873) | 942 | 54.0 | 3183 | 1 | <- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bgp:BGL_1c11440(971) | 982 | 53.9 | 3181 | 86 | <- | K01971 | ligD | DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpf:Rpic12D_0488(867) | 938 | 53.9 | 3178 | 0 | <- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpi:Rpic_0501(863) | 943 | 53.9 | 3138 | 2 | <- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsc:RCFBP_20893(870) | 939 | 53.2 | 3120 | 15 | <- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsg:JK151_05510(869) | 939 | 53.7 | 3118 | 6 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plul:FOB45_16520(855) | 930 | 52.6 | 3109 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsl:RPSI07_2772(872) | 939 | 53.4 | 3105 | 5 | <- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bgu:KS03_2023(905) | 959 | 53.7 | 3102 | 81 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pnn:KEM63_01465(866) | 930 | 52.4 | 3100 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bgl:bglu_1g10900(905) | 959 | 53.6 | 3093 | 75 | <- | K01971 | ligD | DNA primase small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hpeg:EAO82_07810(876) | 928 | 51.7 | 3090 | 2 | <- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > plg:NCTC10937_02207(917) | 952 | 50.8 | 3087 | 3 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbm:CL52_09565(845) | 927 | 52.9 | 3075 | 4 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > etb:N7L95_00510(?) | 944 | 53.5 | 3072 | 0 | -- | - | |||
| > pchl:LLJ08_10540(854) | 928 | 53.1 | 3064 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > piz:LAB08_R20560(879) | 938 | 51.8 | 3064 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psoa:PSm6_48470(?) | 934 | 53.0 | 3062 | 0 | -- | - | |||
| > bgd:bgla_1g12430(892) | 942 | 51.9 | 3059 | 14 | <- | K01971 | ligD | DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phom:KJF94_08090(?) | 931 | 52.1 | 3059 | 0 | -- | - | |||
| > pman:OU5_5917(866) | 934 | 52.5 | 3059 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psed:DM292_08665(855) | 927 | 52.5 | 3059 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > por:APT59_10325(858) | 931 | 52.3 | 3058 | 2 | <- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psc:A458_10100(854) | 928 | 52.9 | 3058 | 1 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |