Entry
Name
Human immunodeficiency virus 1 infection - Galeopterus variegatus (Sunda flying lemur)
Description
Human immunodeficiency virus type 1 (HIV-1) , the causative agent of AIDS (acquired immunodeficiency syndrome), is a lentivirus belonging to the Retroviridae family. The primary cell surface receptor for HIV-1, the CD4 protein, and the co-receptor for HIV-1, either CCR5 or CXCR4, are found on macrophages and T lymphocytes. At the earliest step, sequential binding of virus envelope (Env) glycoprotein gp120 to CD4 and the co-receptor CCR5 or CXCR4 facilitates HIV-1 entry and has the potential to trigger critical signaling that may favor viral replication. At advanced stages of the disease, HIV-1 infection results in dramatic induction of T-cell (CD4+ T and CD8+ T cell) apoptosis both in infected and uninfected bystander T cells, a hallmark of HIV-1 pathogenesis. On the contrary, macrophages are resistant to the cytopathic effect of HIV-1 and produce virus for longer periods of time.
Class
Human Diseases; Infectious disease: viral
BRITE hierarchy
Pathway map
gvr05170 Human immunodeficiency virus 1 infection
Ortholog table
Organism
Galeopterus variegatus (Sunda flying lemur) [GN:
gvr ]
Gene
103590184 FBXW11; F-box/WD repeat-containing protein 11 isoform X1 [KO:K03362 ]
103598080 BTRC; F-box/WD repeat-containing protein 1A isoform X1 [KO:K03362 ]
103605443 LOW QUALITY PROTEIN: S-phase kinase-associated protein 1-like [KO:K03094 ]
103588331 GNAI1; guanine nucleotide-binding protein G(i) subunit alpha-1 [KO:K04630 ]
103585560 GNAI3; guanine nucleotide-binding protein G(k) subunit alpha [KO:K04630 ]
103593713 GNAI2; guanine nucleotide-binding protein G(i) subunit alpha-2 isoform X1 [KO:K04630 ]
103590972 GNAO1; guanine nucleotide-binding protein G(o) subunit alpha isoform X1 [KO:K04534 ]
103586572 PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
103586784 PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
103587883 PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922 ] [EC:2.7.1.153 ]
103585463 PIK3R3; LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649 ]
103593683 PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
103608454 PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649 ]
103587098 GNAQ; guanine nucleotide-binding protein G(q) subunit alpha [KO:K04634 ]
103606318 PLCG1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X1 [KO:K01116 ] [EC:3.1.4.11 ]
103599723 CALML6; LOW QUALITY PROTEIN: calmodulin-like protein 6 [KO:K02183 ]
103591114 PPP3CA; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform [KO:K04348 ] [EC:3.1.3.16 ]
103598106 PPP3CC; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
103598210 PPP3CB; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
103585050 NFATC1; nuclear factor of activated T-cells, cytoplasmic 1 [KO:K04446 ]
103598251 NFATC2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332 ]
103586032 NFATC3; nuclear factor of activated T-cells, cytoplasmic 3 [KO:K17333 ]
103590142 NFATC4; nuclear factor of activated T-cells, cytoplasmic 4 isoform X1 [KO:K17334 ]
103599715 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 [KO:K04536 ]
103596930 GNB2; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 [KO:K04537 ]
103586407 GNB3; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform X1 [KO:K07825 ]
103586779 GNB4; guanine nucleotide-binding protein subunit beta-4 [KO:K04538 ]
103601724 GNB5; guanine nucleotide-binding protein subunit beta-5 [KO:K04539 ]
103591088 GNG3; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 [KO:K04540 ]
103592984 GNG8; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 isoform X1 [KO:K04544 ]
103589599 GNG11; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 [KO:K04546 ]
103588774 GNG13; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 [KO:K04547 ]
103589588 GNGT1; guanine nucleotide-binding protein G(T) subunit gamma-T1 isoform X1 [KO:K04548 ]
103605089 TNFRSF1B; tumor necrosis factor receptor superfamily member 1B [KO:K05141 ]
103602129 MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
103599298 TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
103593058 TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404 ]
103591436 NFKBIA; LOW QUALITY PROTEIN: NF-kappa-B inhibitor alpha [KO:K04734 ]
103581391 DNA dC->dU-editing enzyme APOBEC-3G-like [KO:K18750 ] [EC:3.5.4.-]
103581392 DNA dC->dU-editing enzyme APOBEC-3A-like [KO:K18750 ] [EC:3.5.4.-]
103582173 DNA dC->dU-editing enzyme APOBEC-3C-like [KO:K18750 ] [EC:3.5.4.-]
103583284 DNA dC->dU-editing enzyme APOBEC-3G-like [KO:K18750 ] [EC:3.5.4.-]
103583285 DNA dC->dU-editing enzyme APOBEC-3G-like [KO:K18750 ] [EC:3.5.4.-]
103584151 DNA dC->dU-editing enzyme APOBEC-3G-like [KO:K18750 ] [EC:3.5.4.-]
103600466 APOBEC3H; DNA dC->dU-editing enzyme APOBEC-3H [KO:K18750 ] [EC:3.5.4.-]
103592577 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1 [KO:K22544 ] [EC:3.1.5.-]
103605365 TNFRSF1A; tumor necrosis factor receptor superfamily member 1A [KO:K03158 ]
103602860 TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171 ]
103605950 FASLG; tumor necrosis factor ligand superfamily member 6 [KO:K04389 ]
103607184 FAS; tumor necrosis factor receptor superfamily member 6 [KO:K04390 ]
103592269 CD3D; T-cell surface glycoprotein CD3 delta chain isoform X1 [KO:K06450 ]
103609219 LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, A-11 alpha chain-like [KO:K06751 ]
103610244 LOW QUALITY PROTEIN: saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751 ]
103602353 patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751 ]
103610772 patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751 ]
103606064 patr class I histocompatibility antigen, A-2 alpha chain [KO:K06751 ]
103586434 LOW QUALITY PROTEIN: saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751 ]
103592560 HLA class I histocompatibility antigen, alpha chain E-like [KO:K06751 ]
103585383 TCEB2; transcription elongation factor B polypeptide 2 [KO:K03873 ]
103595473 TCEB1; transcription elongation factor B polypeptide 1 [KO:K03872 ]
103602482 LOW QUALITY PROTEIN: G2/mitotic-specific cyclin-B2-like [KO:K21770 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Evans VA, Khoury G, Saleh S, Cameron PU, Lewin SR
Title
HIV persistence: chemokines and their signalling pathways.
Journal
Reference
Authors
Abbas W, Herbein G
Title
Plasma membrane signaling in HIV-1 infection.
Journal
Reference
Authors
Wu Y, Yoder A
Title
Chemokine coreceptor signaling in HIV-1 infection and pathogenesis.
Journal
Reference
Authors
Choi WT, Duggineni S, Xu Y, Huang Z, An J
Title
Drug discovery research targeting the CXC chemokine receptor 4 (CXCR4).
Journal
Reference
Authors
Vorster PJ, Guo J, Yoder A, Wang W, Zheng Y, Xu X, Yu D, Spear M, Wu Y
Title
LIM kinase 1 modulates cortical actin and CXCR4 cycling and is activated by HIV-1 to initiate viral infection.
Journal
Reference
Authors
Das SR, Jameel S
Title
Biology of the HIV Nef protein.
Journal
Indian J Med Res 121:315-32 (2005)
Reference
Authors
Roy N, Pacini G, Berlioz-Torrent C, Janvier K
Title
Mechanisms underlying HIV-1 Vpu-mediated viral egress.
Journal
Reference
Authors
Magadan JG, Bonifacino JS
Title
Transmembrane domain determinants of CD4 Downregulation by HIV-1 Vpu.
Journal
Reference
Authors
Kumar A, Herbein G
Title
The macrophage: a therapeutic target in HIV-1 infection.
Journal
Reference
Authors
Yokota S, Okabayashi T, Fujii N
Title
The battle between virus and host: modulation of Toll-like receptor signaling pathways by virus infection.
Journal
Reference
Authors
Sauter D, Kirchhoff F
Title
HIV replication: a game of hide and sense.
Journal
Reference
Authors
Altfeld M, Gale M Jr
Title
Innate immunity against HIV-1 infection.
Journal
Reference
Authors
Pasquereau S, Kumar A, Herbein G
Title
Targeting TNF and TNF Receptor Pathway in HIV-1 Infection: from Immune Activation to Viral Reservoirs.
Journal
Reference
Authors
Herbein G, Khan KA
Title
Is HIV infection a TNF receptor signalling-driven disease?
Journal
Reference
Authors
Kumar A, Abbas W, Herbein G
Title
TNF and TNF receptor superfamily members in HIV infection: new cellular targets for therapy?
Journal
Reference
Authors
Abbas W, Herbein G
Title
T-Cell Signaling in HIV-1 Infection.
Journal
Reference
Authors
Cummins NW, Badley AD
Title
Mechanisms of HIV-associated lymphocyte apoptosis: 2010.
Journal
Reference
Authors
Gougeon ML
Title
Apoptosis as an HIV strategy to escape immune attack.
Journal
Reference
Authors
Fevrier M, Dorgham K, Rebollo A
Title
CD4+ T cell depletion in human immunodeficiency virus (HIV) infection: role of apoptosis.
Journal
Reference
Authors
Ross TM
Title
Using death to one's advantage: HIV modulation of apoptosis.
Journal
Reference
Authors
Hurley JH, Bonifacino JS
Title
Nef-arious goings-on at the Golgi.
Journal
Reference
Authors
Wonderlich ER, Leonard JA, Collins KL
Title
HIV immune evasion disruption of antigen presentation by the HIV Nef protein.
Journal
Reference
Authors
Laguette N, Bregnard C, Benichou S, Basmaciogullari S
Title
Human immunodeficiency virus (HIV) type-1, HIV-2 and simian immunodeficiency virus Nef proteins.
Journal
Reference
Authors
Pereira EA, daSilva LL
Title
HIV-1 Nef: Taking Control of Protein Trafficking.
Journal
Reference
Authors
Sugden SM, Bego MG, Pham TN, Cohen EA
Title
Remodeling of the Host Cell Plasma Membrane by HIV-1 Nef and Vpu: A Strategy to Ensure Viral Fitness and Persistence.
Journal
Reference
Authors
Bagga S, Bouchard MJ
Title
Cell cycle regulation during viral infection.
Journal
Reference
Authors
Andersen JL, Planelles V
Title
The role of Vpr in HIV-1 pathogenesis.
Journal
Reference
Authors
Andersen JL, DeHart JL, Zimmerman ES, Ardon O, Kim B, Jacquot G, Benichou S, Planelles V
Title
HIV-1 Vpr-induced apoptosis is cell cycle dependent and requires Bax but not ANT.
Journal
Reference
Authors
Takaori-Kondo A, Shindo K
Title
HIV-1 Vif: a guardian of the virus that opens up a new era in the research field of restriction factors.
Journal
Reference
Authors
Malim MH
Title
APOBEC proteins and intrinsic resistance to HIV-1 infection.
Journal
Reference
Authors
Hultquist JF, Lengyel JA, Refsland EW, LaRue RS, Lackey L, Brown WL, Harris RS
Title
Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1.
Journal
Related pathway
gvr04141 Protein processing in endoplasmic reticulum
gvr04612 Antigen processing and presentation
gvr04620 Toll-like receptor signaling pathway
gvr04810 Regulation of actin cytoskeleton
KO pathway
LinkDB
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