KEGG   PATHWAY: loc04510
Entry
loc04510                    Pathway                                
Name
Focal adhesion - Lepisosteus oculatus (spotted gar)
Description
Cell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the cell-extracellular matrix contact points, specialized structures are formed and termed focal adhesions, where bundles of actin filaments are anchored to transmembrane receptors of the integrin family through a multi-molecular complex of junctional plaque proteins. Some of the constituents of focal adhesions participate in the structural link between membrane receptors and the actin cytoskeleton, while others are signalling molecules, including different protein kinases and phosphatases, their substrates, and various adapter proteins. Integrin signaling is dependent upon the non-receptor tyrosine kinase activities of the FAK and src proteins as well as the adaptor protein functions of FAK, src and Shc to initiate downstream signaling events. These signalling events culminate in reorganization of the actin cytoskeleton; a prerequisite for changes in cell shape and motility, and gene expression. Similar morphological alterations and modulation of gene expression are initiated by the binding of growth factors to their respective receptors, emphasizing the considerable crosstalk between adhesion- and growth factor-mediated signalling.
Class
Cellular Processes; Cellular community - eukaryotes
Pathway map
loc04510  Focal adhesion
loc04510

Other DBs
GO: 0005925
Organism
Lepisosteus oculatus (spotted gar) [GN:loc]
Gene
102682161  rasgrf1; ras-specific guanine nucleotide-releasing factor 1 [KO:K04349]
102682211  [KO:K04513]
102682229  pdgfra; platelet-derived growth factor receptor alpha [KO:K04363] [EC:2.7.10.1]
102682247  itga4; integrin alpha-4 [KO:K06483]
102682260  myl2; myosin regulatory light chain 2, ventricular/cardiac muscle isoform [KO:K10351]
102682466  mylk3; myosin light chain kinase 3 isoform X1 [KO:K00907] [EC:2.7.11.18]
102682636  kdr; vascular endothelial growth factor receptor 2 isoform X1 [KO:K05098] [EC:2.7.10.1]
102682958  thbs4; thrombospondin-4 [KO:K04659]
102682998  col1a1; collagen alpha-1(I) chain [KO:K06236]
102683001  col4a1; collagen alpha-1(IV) chain [KO:K06237]
102683039  col9a2; collagen alpha-2(IX) chain [KO:K08131]
102683205  col4a2; collagen alpha-2(IV) chain isoform X1 [KO:K06237]
102683314  vav1; proto-oncogene vav isoform X1 [KO:K05730]
102683416  cdc42; cell division control protein 42 homolog isoform X2 [KO:K04393]
102683467  pak2; serine/threonine-protein kinase PAK 2 [KO:K04410] [EC:2.7.11.1]
102683469  [KO:K03853] [EC:3.4.22.53]
102683639  tln1; talin-1 isoform X4 [KO:K06271]
102683699  ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit [KO:K06269] [EC:3.1.3.16]
102683741  prkca; protein kinase C alpha type isoform X2 [KO:K02677] [EC:2.7.11.13]
102683764  mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
102683866  [KO:K05096] [EC:2.7.10.1]
102683891  [KO:K04438]
102684011  lama1; laminin subunit alpha-1 [KO:K05637]
102684077  itgav; integrin alpha-V isoform X1 [KO:K06487]
102684091  lamc3; laminin subunit gamma-3 [KO:K06247]
102684095  shc1; SHC-transforming protein 1 isoform X1 [KO:K06279]
102684116  ilk; integrin-linked protein kinase [KO:K06272] [EC:2.7.11.1]
102684349  fn1; fibronectin isoform X1 [KO:K05717]
102684393  ccnd3; G1/S-specific cyclin-D3 [KO:K10151]
102684446  akt2; RAC-beta serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
102684593  shc4; SHC-transforming protein 4 isoform X1 [KO:K17449]
102684606  cav1; caveolin-1 [KO:K06278]
102684651  xiap; E3 ubiquitin-protein ligase XIAP [KO:K04725] [EC:2.3.2.27]
102684864  itga8; integrin alpha-8 [KO:K06584]
102684934  cav2; caveolin-2 [KO:K12958]
102684940  bcl2; apoptosis regulator Bcl-2 [KO:K02161]
102685070  pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
102685186  pten; phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN isoform X1 [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
102685302  shc3; SHC-transforming protein 3 isoform X1 [KO:K17448]
102685356  mylk2; myosin light chain kinase 2, skeletal/cardiac muscle [KO:K00907] [EC:2.7.11.18]
102685465  emp2; epithelial membrane protein 2 [KO:K26256]
102685532  [KO:K06275]
102685646  flt1; vascular endothelial growth factor receptor 1 isoform X1 [KO:K05096] [EC:2.7.10.1]
102685741  parvg; gamma-parvin [KO:K06275]
102685871  vav3; guanine nucleotide exchange factor VAV3 [KO:K05730]
102685958  pdgfa; platelet-derived growth factor subunit A isoform X1 [KO:K04359]
102685990  itga1; integrin alpha-1 [KO:K06480]
102686027  [KO:K00907] [EC:2.7.11.18]
102686084  [KO:K03853] [EC:3.4.22.53]
102686166  thbs2; thrombospondin-2 [KO:K04659]
102686190  itga2; integrin alpha-2 [KO:K06481]
102686196  [KO:K12329]
102686208  thbs1; thrombospondin-1 isoform X1 [KO:K16857]
102686287  [KO:K03853] [EC:3.4.22.53]
102686516  vegfa; vascular endothelial growth factor A isoform X2 [KO:K05448]
102686521  pip5k1b; phosphatidylinositol 4-phosphate 5-kinase type-1 beta [KO:K00889] [EC:2.7.1.68]
102686683  rac3; ras-related C3 botulinum toxin substrate 3 [KO:K07861]
102686749  [KO:K04513]
102686803  lama2; laminin subunit alpha-2 isoform X1 [KO:K05637]
102686895  erbb2; receptor tyrosine-protein kinase erbB-2 [KO:K05083] [EC:2.7.10.1]
102687055  vtn; vitronectin [KO:K06251]
102687195  itgb1; integrin beta-1 isoform X2 [KO:K05719]
102687246  itgb3; integrin beta-3 [KO:K06493]
102687777  itga9; integrin alpha-9 [KO:K06585]
102687804  ccnd1; G1/S-specific cyclin-D1 [KO:K04503]
102687878  mapk10; mitogen-activated protein kinase 10 isoform X4 [KO:K04440] [EC:2.7.11.24]
102687995  pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta isoform X2 [KO:K02649]
102688000  [KO:K12756]
102688050  tnr; tenascin-R isoform X1 [KO:K06252]
102688191  itga2b; integrin alpha-IIb [KO:K06476]
102688253  egfr; epidermal growth factor receptor isoform X1 [KO:K04361] [EC:2.7.10.1]
102688291  [KO:K05699]
102688292  birc2; baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060]
102688384  lamc1; laminin subunit gamma-1 [KO:K05635]
102688459  tnn; tenascin-N [KO:K06252]
102688673  pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
102688760  myl5; myosin light chain 5 [KO:K12753]
102688808  col6a3; collagen alpha-3(VI) chain [KO:K06238]
102688837  rock2; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
102688904  pdgfc; platelet-derived growth factor C isoform X2 [KO:K05450]
102689009  itga3; integrin alpha-3 isoform X1 [KO:K06482]
102689161  [KO:K04448]
102689276  itga6; integrin alpha-6 isoform X1 [KO:K06485]
102689346  pxn; paxillin [KO:K05760]
102689375  arhgap35; rho GTPase-activating protein 35 [KO:K05732]
102689455  rhoc; rho-related GTP-binding protein RhoC [KO:K04513]
102689711  [KO:K05734] [EC:2.7.11.1]
102689722  egf; pro-epidermal growth factor isoform X1 [KO:K04357]
102689935  mylk4; myosin light chain kinase family member 4 isoform X1 [KO:K00907] [EC:2.7.11.18]
102689943  prkcb; protein kinase C beta type [KO:K19662] [EC:2.7.11.13]
102689959  [KO:K04659]
102690261  col2a1; collagen alpha-1(II) chain isoform X1 [KO:K19719]
102690279  itgb5; integrin beta-5 [KO:K06588]
102690296  [KO:K17447]
102690353  col9a1; collagen alpha-1(IX) chain [KO:K08131]
102690385  rap1a; ras-related protein Rap-1A isoform X1 [KO:K04353]
102690433  akt3; RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
102690467  igf1r; insulin-like growth factor 1 receptor [KO:K05087] [EC:2.7.10.1]
102690642  pip5k1a; phosphatidylinositol 4-phosphate 5-kinase type-1 alpha [KO:K00889] [EC:2.7.1.68]
102690666  itga11; integrin alpha-11 [KO:K06587]
102690670  dock1; dedicator of cytokinesis protein 1 isoform X1 [KO:K13708]
102690749  actg1; actin, cytoplasmic 2 [KO:K05692]
102690827  [KO:K08131]
102690979  [KO:K12758]
102691100  pdpk1; 3-phosphoinositide-dependent protein kinase 1 [KO:K06276] [EC:2.7.11.1]
102691129  tln2; talin-2 isoform X1 [KO:K06271]
102691138  [KO:K04440] [EC:2.7.11.24]
102691207  akt1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
102691241  figf; vascular endothelial growth factor D [KO:K05449]
102691297  [KO:K26255]
102691532  map2k1; dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
102691547  [KO:K12757]
102691599  cav3; caveolin-3 [KO:K12959]
102691737  vcl; LOW QUALITY PROTEIN: vinculin [KO:K05700]
102691786  [KO:K00922] [EC:2.7.1.153]
102691808  pak3; serine/threonine-protein kinase PAK 3 isoform X1 [KO:K05733] [EC:2.7.11.1]
102692005  pak6; serine/threonine-protein kinase PAK 6 isoform X1 [KO:K05735] [EC:2.7.11.1]
102692161  gsk3b; glycogen synthase kinase-3 beta isoform X4 [KO:K03083] [EC:2.7.11.26]
102692188  pak1; serine/threonine-protein kinase PAK 1 isoform X1 [KO:K04409] [EC:2.7.11.1]
102692301  sos1; son of sevenless homolog 1 isoform X1 [KO:K03099]
102692374  bcar1; breast cancer anti-estrogen resistance protein 1 isoform X1 [KO:K05726]
102692400  mapk8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
102692545  raf1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
102692554  vwf; von Willebrand factor [KO:K03900]
102692563  rac2; LOW QUALITY PROTEIN: ras-related C3 botulinum toxin substrate 2 [KO:K07860]
102692618  lamb1; laminin subunit beta-1 [KO:K05636]
102692646  vav2; guanine nucleotide exchange factor VAV2 isoform X1 [KO:K05730]
102692699  [KO:K06238]
102692734  lama4; laminin subunit alpha-4 [KO:K06241]
102692890  arhgap5; rho GTPase-activating protein 5 [KO:K13709]
102692897  chad; chondroadherin [KO:K06248]
102693016  [KO:K16859]
102693222  [KO:K05699]
102693355  col4a6; collagen alpha-6(IV) chain isoform X1 [KO:K06237]
102693436  pik3r3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X3 [KO:K02649]
102693550  flnb; filamin-B isoform X1 [KO:K27392]
102693554  col4a5; collagen alpha-5(IV) chain [KO:K06237]
102693762  jun; transcription factor AP-1 [KO:K04448]
102693793  elk1; ETS domain-containing protein Elk-1 [KO:K04375]
102693824  braf; serine/threonine-protein kinase B-raf isoform X2 [KO:K04365] [EC:2.7.11.1]
102693829  lamc2; laminin subunit gamma-2 isoform X1 [KO:K06246]
102694002  itga5; integrin alpha-5 [KO:K06484]
102694156  reln; LOW QUALITY PROTEIN: reelin [KO:K06249] [EC:3.4.21.-]
102694319  [KO:K12755]
102694519  parva; alpha-parvin [KO:K06275]
102694560  itgb6; integrin beta-6 isoform X1 [KO:K06589]
102694666  pdgfd; platelet-derived growth factor D isoform X1 [KO:K05450]
102694884  col1a2; collagen alpha-2(I) chain isoform X1 [KO:K06236]
102694945  igf1; insulin-like growth factor I isoform X3 [KO:K05459]
102695191  itga7; integrin alpha-7 isoform X1 [KO:K06583]
102695204  lamb4; laminin subunit beta-4 isoform X1 [KO:K06245]
102695429  pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
102695616  crkl; crk-like protein [KO:K04438]
102695708  flna; filamin-A isoform X7 [KO:K04437]
102695741  itgb8; integrin beta-8 [KO:K06591]
102696088  tnc; tenascin isoform X1 [KO:K06252]
102696115  [KO:K12958]
102696204  actb; actin, cytoplasmic 1 [KO:K05692]
102696208  col4a3; collagen alpha-3(IV) chain [KO:K06237]
102696260  met; hepatocyte growth factor receptor isoform X1 [KO:K05099] [EC:2.7.10.1]
102696354  [KO:K06269] [EC:3.1.3.16]
102696359  fyn; tyrosine-protein kinase Fyn isoform X1 [KO:K05703] [EC:2.7.10.2]
102696469  rac1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
102696513  sos2; son of sevenless homolog 2 isoform X1 [KO:K03099]
102696519  ccnd2; G1/S-specific cyclin-D2 isoform X1 [KO:K10151]
102696521  lama3; laminin subunit alpha-3 isoform X1 [KO:K06240]
102696565  itgb7; integrin beta-7 [KO:K06590]
102696581  grb2; growth factor receptor-bound protein 2 [KO:K04364]
102696593  col4a4; collagen alpha-4(IV) chain [KO:K06237]
102696645  [KO:K05449]
102696655  [KO:K06238]
102696797  comp; cartilage oligomeric matrix protein isoform X1 [KO:K04659]
102696821  pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X3 [KO:K02649]
102696979  itgb4; integrin beta-4 isoform X1 [KO:K06525]
102697036  pdgfrb; platelet-derived growth factor receptor beta isoform X1 [KO:K05089] [EC:2.7.10.1]
102697050  mylk; myosin light chain kinase, smooth muscle isoform X1 [KO:K00907] [EC:2.7.11.18]
102697231  rap1b; ras-related protein Rap-1b [KO:K07836]
102697324  [KO:K05704] [EC:2.7.10.2]
102697398  hras; GTPase HRas [KO:K02833]
102697581  rapgef1; rap guanine nucleotide exchange factor 1 isoform X1 [KO:K06277]
102697662  myl7; myosin regulatory light chain 2, atrial isoform [KO:K12754]
102698028  col6a1; collagen alpha-1(VI) chain [KO:K06238]
102698086  hgf; hepatocyte growth factor isoform X1 [KO:K05460]
102698229  col6a2; collagen alpha-2(VI) chain isoform X1 [KO:K06238]
102698250  itga10; integrin alpha-10 [KO:K06586]
102698253  [KO:K04393]
102698309  pip5k1c; phosphatidylinositol 4-phosphate 5-kinase type-1 gamma [KO:K00889] [EC:2.7.1.68]
102698331  lamb3; laminin subunit beta-3 [KO:K06244]
102698339  vegfc; vascular endothelial growth factor C [KO:K05449]
102698684  lamb2; laminin subunit beta-2 isoform X1 [KO:K06243]
102698697  rock1; rho-associated protein kinase 1 [KO:K04514] [EC:2.7.11.1]
102698887  [KO:K06243]
102698950  flt4; vascular endothelial growth factor receptor 3 [KO:K05097] [EC:2.7.10.1]
102698963  ctnnb1; catenin beta-1 isoform X1 [KO:K02105]
102699052  lama5; laminin subunit alpha-5 isoform X1 [KO:K06240]
102699066  pak7; serine/threonine-protein kinase PAK 7 isoform X2 [KO:K05736] [EC:2.7.11.1]
102699172  ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit [KO:K06269] [EC:3.1.3.16]
102699201  vasp; vasodilator-stimulated phosphoprotein [KO:K06274]
107079572  col9a3; collagen alpha-3(IX) chain [KO:K08131]
Compound
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Berman AE, Kozlova NI, Morozevich GE.
  Title
Integrins: structure and signaling.
  Journal
Biochemistry (Mosc) 68:1284-99 (2003)
DOI:10.1023/b:biry.0000011649.03634.74
Reference
  Authors
Lee JW, Juliano R.
  Title
Mitogenic signal transduction by integrin- and growth factor receptor-mediated pathways.
  Journal
Mol Cells 17:188-202 (2004)
Reference
  Authors
Danen EH, Yamada KM.
  Title
Fibronectin, integrins, and growth control.
  Journal
J Cell Physiol 189:1-13 (2001)
DOI:10.1002/jcp.1137
Reference
  Authors
Guo W, Giancotti FG.
  Title
Integrin signalling during tumour progression.
  Journal
Nat Rev Mol Cell Biol 5:816-26 (2004)
DOI:10.1038/nrm1490
Reference
  Authors
Petit V, Thiery JP.
  Title
Focal adhesions: structure and dynamics.
  Journal
Biol Cell 92:477-94 (2000)
DOI:10.1016/S0248-4900(00)01101-1
Reference
  Authors
Stupack DG, Cheresh DA.
  Title
Get a ligand, get a life: integrins, signaling and cell survival.
  Journal
J Cell Sci 115:3729-38 (2002)
DOI:10.1242/jcs.00071
Reference
  Authors
Parsons JT.
  Title
Focal adhesion kinase: the first ten years.
  Journal
J Cell Sci 116:1409-16 (2003)
DOI:10.1242/jcs.00373
Reference
  Authors
Mitra SK, Hanson DA, Schlaepfer DD.
  Title
Focal adhesion kinase: in command and control of cell motility.
  Journal
Nat Rev Mol Cell Biol 6:56-68 (2005)
DOI:10.1038/nrm1549
Reference
  Authors
Comoglio PM, Boccaccio C, Trusolino L.
  Title
Interactions between growth factor receptors and adhesion molecules: breaking the rules.
  Journal
Curr Opin Cell Biol 15:565-71 (2003)
DOI:10.1016/S0955-0674(03)00096-6
Reference
  Authors
Schlaepfer DD, Mitra SK.
  Title
Multiple connections link FAK to cell motility and invasion.
  Journal
Curr Opin Genet Dev 14:92-101 (2004)
DOI:10.1016/j.gde.2003.12.002
Reference
  Authors
Burridge K, Wennerberg K.
  Title
Rho and Rac take center stage.
  Journal
Cell 116:167-79 (2004)
DOI:10.1016/S0092-8674(04)00003-0
Reference
  Authors
Schmitz AA, Govek EE, Bottner B, Van Aelst L.
  Title
Rho GTPases: signaling, migration, and invasion.
  Journal
Exp Cell Res 261:1-12 (2000)
DOI:10.1006/excr.2000.5049
Reference
  Authors
Vanhaesebroeck B, Alessi DR.
  Title
The PI3K-PDK1 connection: more than just a road to PKB.
  Journal
Biochem J 346 Pt 3:561-76 (2000)
DOI:10.1042/bj3460561
Reference
  Authors
Nicholson KM, Anderson NG.
  Title
The protein kinase B/Akt signalling pathway in human malignancy.
  Journal
Cell Signal 14:381-95 (2002)
DOI:10.1016/S0898-6568(01)00271-6
Reference
  Authors
Oloumi A, McPhee T, Dedhar S.
  Title
Regulation of E-cadherin expression and beta-catenin/Tcf transcriptional activity by the integrin-linked kinase.
  Journal
Biochim Biophys Acta 1691:1-15 (2004)
DOI:10.1016/j.bbamcr.2003.12.002
Reference
  Authors
Turner CE.
  Title
Paxillin and focal adhesion signalling.
  Journal
Nat Cell Biol 2:E231-6 (2000)
DOI:10.1038/35046659
Reference
  Authors
Hlobilkova A, Knillova J, Bartek J, Lukas J, Kolar Z.
  Title
The mechanism of action of the tumour suppressor gene PTEN.
  Journal
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 147:19-25 (2003)
Related
pathway
loc04010  MAPK signaling pathway
loc04060  Cytokine-cytokine receptor interaction
loc04070  Phosphatidylinositol signaling system
loc04110  Cell cycle
loc04310  Wnt signaling pathway
loc04512  ECM-receptor interaction
loc04810  Regulation of actin cytoskeleton
KO pathway
ko04510   

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