KEGG   PATHWAY: slal04510
Entry
slal04510                   Pathway                                
Name
Focal adhesion - Seriola lalandi dorsalis (Yellowtail amberjack)
Description
Cell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the cell-extracellular matrix contact points, specialized structures are formed and termed focal adhesions, where bundles of actin filaments are anchored to transmembrane receptors of the integrin family through a multi-molecular complex of junctional plaque proteins. Some of the constituents of focal adhesions participate in the structural link between membrane receptors and the actin cytoskeleton, while others are signalling molecules, including different protein kinases and phosphatases, their substrates, and various adapter proteins. Integrin signaling is dependent upon the non-receptor tyrosine kinase activities of the FAK and src proteins as well as the adaptor protein functions of FAK, src and Shc to initiate downstream signaling events. These signalling events culminate in reorganization of the actin cytoskeleton; a prerequisite for changes in cell shape and motility, and gene expression. Similar morphological alterations and modulation of gene expression are initiated by the binding of growth factors to their respective receptors, emphasizing the considerable crosstalk between adhesion- and growth factor-mediated signalling.
Class
Cellular Processes; Cellular community - eukaryotes
Pathway map
slal04510  Focal adhesion
slal04510

Other DBs
GO: 0005925
Organism
Seriola lalandi dorsalis (Yellowtail amberjack) [GN:slal]
Gene
111644184  [KO:K05704] [EC:2.7.10.2]
111644198  lama5; laminin subunit alpha-5 [KO:K06240]
111644345  pdgfra; platelet-derived growth factor receptor alpha [KO:K04363] [EC:2.7.10.1]
111644356  kdr; vascular endothelial growth factor receptor 2 isoform X1 [KO:K05098] [EC:2.7.10.1]
111644702  [KO:K12753]
111644953  [KO:K05760]
111644958  lama1; laminin subunit alpha-1 [KO:K05637]
111645313  [KO:K04456] [EC:2.7.11.1]
111646416  xiap; E3 ubiquitin-protein ligase XIAP isoform X1 [KO:K04725] [EC:2.3.2.27]
111646556  [KO:K04440] [EC:2.7.11.24]
111646633  pdgfrb; platelet-derived growth factor receptor beta [KO:K05089] [EC:2.7.10.1]
111646952  thbs3; thrombospondin-3 [KO:K04659]
111647380  [KO:K04361] [EC:2.7.10.1]
111647424  [KO:K06251]
111647517  [KO:K19662] [EC:2.7.11.13]
111647523  emp2; epithelial membrane protein 2 [KO:K26256]
111647584  [KO:K05692]
111647606  vegfc; vascular endothelial growth factor C [KO:K05449]
111647650  mylk; myosin light chain kinase, smooth muscle [KO:K00907] [EC:2.7.11.18]
111647742  bcar1; breast cancer anti-estrogen resistance protein 1 isoform X1 [KO:K05726]
111647809  [KO:K04503]
111647878  ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit [KO:K06269] [EC:3.1.3.16]
111647905  [KO:K10351]
111648049  [KO:K06252]
111648134  [KO:K04448]
111648147  pdgfc; platelet-derived growth factor C [KO:K05450]
111648180  egf; pro-epidermal growth factor [KO:K04357]
111648245  vav3; guanine nucleotide exchange factor VAV3 [KO:K05730]
111648309  [KO:K06485]
111649228  [KO:K12753]
111649592  [KO:K03853] [EC:3.4.22.53]
111649666  [KO:K02161]
111649693  [KO:K06245]
111649694  [KO:K05636]
111649850  lamc2; laminin subunit gamma-2 [KO:K06246]
111649932  [KO:K02649]
111650106  [KO:K00889] [EC:2.7.1.68]
111650377  parvg; gamma-parvin [KO:K06275]
111650408  parvb; beta-parvin isoform X1 [KO:K06275]
111650706  [KO:K04410] [EC:2.7.11.1]
111650904  [KO:K00889] [EC:2.7.1.68]
111650973  [KO:K04353]
111651009  [KO:K05703] [EC:2.7.10.2]
111651017  [KO:K06269] [EC:3.1.3.16]
111651243  [KO:K06238]
111651337  [KO:K06274]
111651354  [KO:K05692]
111651358  [KO:K12753]
111651451  [KO:K02649]
111651472  lamc1; laminin subunit gamma-1 [KO:K05635]
111651654  vegfd; vascular endothelial growth factor D isoform X1 [KO:K05449]
111651711  [KO:K12959]
111652030  flt4; vascular endothelial growth factor receptor 3 [KO:K05097] [EC:2.7.10.1]
111652184  itga10; integrin alpha-10 [KO:K06586]
111652244  [KO:K06269] [EC:3.1.3.16]
111652253  [KO:K12758]
111652260  erbb2; receptor tyrosine-protein kinase erbB-2 [KO:K05083] [EC:2.7.10.1]
111652357  [KO:K04409] [EC:2.7.11.1]
111652444  pak6; serine/threonine-protein kinase PAK 6 [KO:K05735] [EC:2.7.11.1]
111652514  [KO:K04410] [EC:2.7.11.1]
111652554  itgb6; integrin beta-6 [KO:K06589]
111652560  [KO:K05717]
111652779  itga8; integrin alpha-8 [KO:K06584]
111652941  egfr; epidermal growth factor receptor [KO:K04361] [EC:2.7.10.1]
111653082  [KO:K06275]
111653214  [KO:K12958]
111653269  rock1; rho-associated protein kinase 1 isoform X1 [KO:K04514] [EC:2.7.11.39]
111653328  [KO:K05087] [EC:2.7.10.1]
111653371  vwf; von Willebrand factor isoform X1 [KO:K03900]
111653387  [KO:K17388] [EC:2.7.11.39]
111653388  hgf; hepatocyte growth factor [KO:K05460]
111653428  sos1; son of sevenless homolog 1 [KO:K03099]
111653646  ilk; integrin-linked protein kinase [KO:K06272] [EC:2.7.11.1]
111653776  pip5k1c; phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1 [KO:K00889] [EC:2.7.1.68]
111653956  [KO:K05732]
111653974  [KO:K04456] [EC:2.7.11.1]
111654088  itgb5; integrin beta-5 [KO:K06588]
111654176  [KO:K04393]
111654285  [KO:K17447]
111654436  [KO:K06237]
111654446  tnn; tenascin-N isoform X1 [KO:K06252]
111654456  tnr; tenascin-R [KO:K06252]
111654459  [KO:K06237]
111654545  [KO:K08131]
111654847  [KO:K04437]
111654894  myl7; myosin regulatory light chain 2, atrial isoform [KO:K12754]
111654928  itga2; integrin alpha-2 [KO:K06481]
111654989  [KO:K12329]
111654994  [KO:K19719]
111655057  [KO:K06587]
111655103  [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
111655230  [KO:K04659]
111655245  dock1; dedicator of cytokinesis protein 1 isoform X1 [KO:K13708]
111655272  pdgfd; platelet-derived growth factor D [KO:K05450]
111655424  chad; chondroadherin [KO:K06248]
111655640  crkl; crk-like protein [KO:K04438]
111655888  [KO:K05730]
111655946  vav2; guanine nucleotide exchange factor VAV2 isoform X1 [KO:K05730]
111656009  arhgap35; rho GTPase-activating protein 35 [KO:K05732]
111656071  [KO:K04438]
111656147  [KO:K06236]
111656293  [KO:K17388] [EC:2.7.11.39]
111656573  [KO:K12757]
111656795  itga1; integrin alpha-1 [KO:K06480]
111656804  [KO:K04659]
111656807  mapk10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
111656890  [KO:K05735] [EC:2.7.11.1]
111656921  col1a2; collagen alpha-2(I) chain isoform X1 [KO:K06236]
111656972  shc1; SHC-transforming protein 1 isoform X1 [KO:K06279]
111657005  [KO:K12757]
111657078  itgb3; integrin beta-3 isoform X1 [KO:K06493]
111657104  vcl; vinculin isoform X1 [KO:K05700]
111657114  [KO:K00907] [EC:2.7.11.18]
111657213  [KO:K05725] [EC:2.7.10.2]
111657325  [KO:K27392]
111657450  [KO:K06238]
111657451  [KO:K06238]
111657524  [KO:K06476]
111657570  [KO:K00889] [EC:2.7.1.68]
111657703  [KO:K04371] [EC:2.7.11.24]
111657843  [KO:K12958]
111657852  [KO:K12959]
111657969  [KO:K05734] [EC:2.7.11.1]
111657978  actn4; alpha-actinin-4 isoform X1 [KO:K05699]
111658073  ctnnb1; catenin beta-1 [KO:K02105]
111658188  [KO:K05700]
111658196  [KO:K04440] [EC:2.7.11.24]
111658453  [KO:K06493]
111658604  [KO:K03853] [EC:3.4.22.53]
111658643  pdpk1; 3-phosphoinositide-dependent protein kinase 1 [KO:K06276] [EC:2.7.11.1]
111658866  [KO:K04513]
111658878  [KO:K05459]
111658892  [KO:K00889] [EC:2.7.1.68]
111658968  itga9; integrin alpha-9 [KO:K06585]
111659000  col9a1; collagen alpha-1(IX) chain [KO:K08131]
111659012  thbs2; thrombospondin-2 isoform X1 [KO:K04659]
111659091  [KO:K04349]
111659112  [KO:K06271]
111659284  [KO:K02105]
111659458  [KO:K04456] [EC:2.7.11.1]
111659504  arhgap5; rho GTPase-activating protein 5 [KO:K13709]
111659520  itgav; LOW QUALITY PROTEIN: integrin alpha-V [KO:K06487]
111659609  [KO:K06271]
111659692  [KO:K02677] [EC:2.7.11.13]
111659838  [KO:K05719]
111659975  [KO:K12756]
111660032  ppp1r12a; protein phosphatase 1 regulatory subunit 12A isoform X1 [KO:K06270]
111660040  [KO:K10151]
111660247  [KO:K00889] [EC:2.7.1.68]
111660320  [KO:K04659]
111660421  [KO:K17457]
111660519  [KO:K10151]
111660545  [KO:K06269] [EC:3.1.3.16]
111660567  [KO:K12758]
111660594  [KO:K00907] [EC:2.7.11.18]
111660679  src; proto-oncogene tyrosine-protein kinase Src isoform X1 [KO:K05704] [EC:2.7.10.2]
111660814  [KO:K04513]
111660864  ccnd3; G1/S-specific cyclin-D3 [KO:K10152]
111660943  mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
111661096  [KO:K00907] [EC:2.7.11.18]
111661140  shc4; SHC-transforming protein 4 [KO:K17449]
111661265  [KO:K00922] [EC:2.7.1.153]
111661323  [KO:K07836]
111661385  [KO:K17388] [EC:2.7.11.39]
111661403  lama2; laminin subunit alpha-2 [KO:K05637]
111661462  [KO:K16857]
111661496  [KO:K06269] [EC:3.1.3.16]
111661651  reln; reelin [KO:K06249] [EC:3.4.21.-]
111661823  hras; GTPase HRas [KO:K02833]
111661876  lamb2; laminin subunit beta-2 [KO:K06243]
111661895  [KO:K06484]
111661935  [KO:K06243]
111661945  [KO:K04353]
111662056  col4a1; collagen alpha-1(IV) chain [KO:K06237]
111662131  gsk3b; glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
111662170  col4a2; collagen alpha-2(IV) chain isoform X1 [KO:K06237]
111662291  [KO:K04513]
111662376  ptk2; focal adhesion kinase 1 isoform X1 [KO:K05725] [EC:2.7.10.2]
111662465  [KO:K06236]
111662498  [KO:K26255]
111662758  diaph1; protein diaphanous homolog 1 isoform X1 [KO:K05740]
111662923  flt1; vascular endothelial growth factor receptor 1 isoform X1 [KO:K05096] [EC:2.7.10.1]
111663130  pgf; placenta growth factor [KO:K16859]
111663195  [KO:K16857]
111663270  [KO:K19662] [EC:2.7.11.13]
111663337  [KO:K06237]
111663383  [KO:K06237]
111663425  col6a3; collagen alpha-3(VI) chain isoform X1 [KO:K06238]
111664160  [KO:K05448]
111664218  braf; serine/threonine-protein kinase B-raf isoform X1 [KO:K04365] [EC:2.7.11.1]
111664334  rac3; ras-related C3 botulinum toxin substrate 3 [KO:K07861]
111664536  [KO:K26255]
111664700  igf1; insulin-like growth factor I [KO:K05459]
111664771  [KO:K04440] [EC:2.7.11.24]
111664807  shc3; SHC-transforming protein 3 [KO:K17448]
111665361  [KO:K06269] [EC:3.1.3.16]
111665367  [KO:K05449]
111665388  [KO:K06482]
111665447  [KO:K04456] [EC:2.7.11.1]
111665646  [KO:K08131]
111665702  [KO:K04393]
111665725  [KO:K06252]
111665788  itga4; integrin alpha-4 [KO:K06483]
111665874  [KO:K04410] [EC:2.7.11.1]
111665903  sos2; son of sevenless homolog 2 [KO:K03099]
111665914  actn1; alpha-actinin-1 isoform X1 [KO:K05699]
111666021  [KO:K06252]
111666072  [KO:K10151]
111666176  [KO:K16060]
111666241  [KO:K05733] [EC:2.7.11.1]
111666302  [KO:K06272] [EC:2.7.11.1]
111666345  [KO:K05096] [EC:2.7.10.1]
111666387  [KO:K04513]
111666425  bad; bcl2-associated agonist of cell death [KO:K02158]
111666462  [KO:K06238]
111666464  col6a1; collagen alpha-1(VI) chain [KO:K06238]
111666541  jun; transcription factor AP-1 [KO:K04448]
111666676  [KO:K02161]
111666834  pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
111666970  [KO:K06270]
111667016  map2k1; dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
111667052  [KO:K04349]
111667065  [KO:K06271]
111667085  itgb4; integrin beta-4 [KO:K06525]
111667112  col4a6; collagen alpha-6(IV) chain isoform X1 [KO:K06237]
111667113  col4a5; collagen alpha-5(IV) chain isoform X1 [KO:K06237]
111667536  [KO:K04392]
111667551  pdgfa; platelet-derived growth factor subunit A [KO:K04359]
111667575  [KO:K02677] [EC:2.7.11.13]
111667752  [KO:K12755]
111668040  rapgef1; rap guanine nucleotide exchange factor 1 isoform X1 [KO:K06277]
111668066  lamc3; laminin subunit gamma-3 [KO:K06247]
111668127  [KO:K06251]
111668415  [KO:K05719]
111668527  itga6; integrin alpha-6 isoform X1 [KO:K06485]
111668559  lamb3; laminin subunit beta-3 [KO:K06244]
111668623  [KO:K04393]
111668658  [KO:K06484]
111668768  [KO:K05717]
111668884  pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
111669019  [KO:K04513]
111669021  [KO:K04513]
111669094  [KO:K05636]
111669116  [KO:K06240]
111669291  ccnd1; G1/S-specific cyclin-D1 [KO:K04503]
111669521  [KO:K03853] [EC:3.4.22.53]
111669522  [KO:K03853] [EC:3.4.22.53]
111669627  [KO:K04375]
111669824  [KO:K19663] [EC:2.7.11.13]
111669926  [KO:K04393]
111669940  zyx; LOW QUALITY PROTEIN: zyxin [KO:K06273]
111670005  comp; cartilage oligomeric matrix protein [KO:K04659]
111670038  [KO:K04503]
111670050  [KO:K01110] [EC:3.1.3.16 3.1.3.48 3.1.3.67]
111670134  itga11; integrin alpha-11 [KO:K06587]
111670186  itga7; integrin alpha-7 isoform X1 [KO:K06583]
111670205  [KO:K19719]
111670459  [KO:K06269] [EC:3.1.3.16]
111670470  lama3; laminin subunit alpha-3 [KO:K06240]
111670485  bcl2; apoptosis regulator Bcl-2 [KO:K02161]
111670553  [KO:K02649]
111670636  pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
111670903  [KO:K10351]
111670942  [KO:K05760]
111671089  [KO:K02649]
111671107  [KO:K06485]
111671142  [KO:K05089] [EC:2.7.10.1]
111671297  [KO:K04438]
111671547  col9a3; collagen alpha-3(IX) chain [KO:K08131]
111671597  pik3r3; phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649]
111671654  [KO:K00922] [EC:2.7.1.153]
111671734  [KO:K00907] [EC:2.7.11.18]
111671871  [KO:K07860]
111671911  [KO:K05460]
111671973  [KO:K04448]
111672005  rac1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
111672042  itga3; integrin alpha-3 [KO:K06482]
111672162  cav1; caveolin-1 [KO:K06278]
111672165  cav2; caveolin-2 [KO:K12958]
111672169  met; hepatocyte growth factor receptor [KO:K05099] [EC:2.7.10.1]
111672203  raf1; RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
111672288  [KO:K05087] [EC:2.7.10.1]
111672585  vegfa; vascular endothelial growth factor A isoform X1 [KO:K05448]
111672600  [KO:K16859]
111672671  pak5; serine/threonine-protein kinase PAK 5 isoform X1 [KO:K05736] [EC:2.7.11.1]
111672906  lama4; laminin subunit alpha-4 [KO:K06241]
111672913  fyn; tyrosine-protein kinase Fyn isoform X1 [KO:K05703] [EC:2.7.10.2]
111672948  vav1; proto-oncogene vav isoform X1 [KO:K05730]
111673001  actb; actin, cytoplasmic 1 [KO:K05692]
111673263  akt1; RAC-alpha serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
111673336  col9a2; collagen alpha-2(IX) chain isoform X1 [KO:K08131]
111673426  [KO:K04359]
111673435  [KO:K17386]
111673607  [KO:K00922] [EC:2.7.1.153]
111673732  [KO:K17388] [EC:2.7.11.39]
111673746  grb2; growth factor receptor-bound protein 2 [KO:K04364]
Compound
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Berman AE, Kozlova NI, Morozevich GE.
  Title
Integrins: structure and signaling.
  Journal
Biochemistry (Mosc) 68:1284-99 (2003)
DOI:10.1023/b:biry.0000011649.03634.74
Reference
  Authors
Lee JW, Juliano R.
  Title
Mitogenic signal transduction by integrin- and growth factor receptor-mediated pathways.
  Journal
Mol Cells 17:188-202 (2004)
Reference
  Authors
Danen EH, Yamada KM.
  Title
Fibronectin, integrins, and growth control.
  Journal
J Cell Physiol 189:1-13 (2001)
DOI:10.1002/jcp.1137
Reference
  Authors
Guo W, Giancotti FG.
  Title
Integrin signalling during tumour progression.
  Journal
Nat Rev Mol Cell Biol 5:816-26 (2004)
DOI:10.1038/nrm1490
Reference
  Authors
Petit V, Thiery JP.
  Title
Focal adhesions: structure and dynamics.
  Journal
Biol Cell 92:477-94 (2000)
DOI:10.1016/S0248-4900(00)01101-1
Reference
  Authors
Stupack DG, Cheresh DA.
  Title
Get a ligand, get a life: integrins, signaling and cell survival.
  Journal
J Cell Sci 115:3729-38 (2002)
DOI:10.1242/jcs.00071
Reference
  Authors
Parsons JT.
  Title
Focal adhesion kinase: the first ten years.
  Journal
J Cell Sci 116:1409-16 (2003)
DOI:10.1242/jcs.00373
Reference
  Authors
Mitra SK, Hanson DA, Schlaepfer DD.
  Title
Focal adhesion kinase: in command and control of cell motility.
  Journal
Nat Rev Mol Cell Biol 6:56-68 (2005)
DOI:10.1038/nrm1549
Reference
  Authors
Comoglio PM, Boccaccio C, Trusolino L.
  Title
Interactions between growth factor receptors and adhesion molecules: breaking the rules.
  Journal
Curr Opin Cell Biol 15:565-71 (2003)
DOI:10.1016/S0955-0674(03)00096-6
Reference
  Authors
Schlaepfer DD, Mitra SK.
  Title
Multiple connections link FAK to cell motility and invasion.
  Journal
Curr Opin Genet Dev 14:92-101 (2004)
DOI:10.1016/j.gde.2003.12.002
Reference
  Authors
Burridge K, Wennerberg K.
  Title
Rho and Rac take center stage.
  Journal
Cell 116:167-79 (2004)
DOI:10.1016/S0092-8674(04)00003-0
Reference
  Authors
Schmitz AA, Govek EE, Bottner B, Van Aelst L.
  Title
Rho GTPases: signaling, migration, and invasion.
  Journal
Exp Cell Res 261:1-12 (2000)
DOI:10.1006/excr.2000.5049
Reference
  Authors
Vanhaesebroeck B, Alessi DR.
  Title
The PI3K-PDK1 connection: more than just a road to PKB.
  Journal
Biochem J 346 Pt 3:561-76 (2000)
DOI:10.1042/bj3460561
Reference
  Authors
Nicholson KM, Anderson NG.
  Title
The protein kinase B/Akt signalling pathway in human malignancy.
  Journal
Cell Signal 14:381-95 (2002)
DOI:10.1016/S0898-6568(01)00271-6
Reference
  Authors
Oloumi A, McPhee T, Dedhar S.
  Title
Regulation of E-cadherin expression and beta-catenin/Tcf transcriptional activity by the integrin-linked kinase.
  Journal
Biochim Biophys Acta 1691:1-15 (2004)
DOI:10.1016/j.bbamcr.2003.12.002
Reference
  Authors
Turner CE.
  Title
Paxillin and focal adhesion signalling.
  Journal
Nat Cell Biol 2:E231-6 (2000)
DOI:10.1038/35046659
Reference
  Authors
Hlobilkova A, Knillova J, Bartek J, Lukas J, Kolar Z.
  Title
The mechanism of action of the tumour suppressor gene PTEN.
  Journal
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 147:19-25 (2003)
Related
pathway
slal04010  MAPK signaling pathway
slal04060  Cytokine-cytokine receptor interaction
slal04070  Phosphatidylinositol signaling system
slal04110  Cell cycle
slal04310  Wnt signaling pathway
slal04512  ECM-receptor interaction
slal04810  Regulation of actin cytoskeleton
KO pathway
ko04510   

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