SSDB Best Search Result

Entry:psd:DSC_00345 (597 a.a.)
Name:ATP-dependent RNA helicase RhlB
KO:K03732 ATP-dependent RNA helicase RhlB

Search Result : 212 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
xom:XOO4055 ATP-dependent RNA helicase                  K03732     574     2766     0.742      598     
xac:XAC3829 ATP-dependent RNA helicase                  K03732     571     2758     0.740      600     
xcc:XCC3776 ATP-dependent RNA helicase                  K03732     573     2744     0.743      600     
xfa:XF_2696 ATP-dependent RNA helicase                  K03732     544     2279     0.651      570     
vvu:VV1_0939 ATP-dependent RNA helicase RhlB            K03732     435     1448     0.566      403     
sfl:SF3853 ATP-dependent RNA helicase RhlB              K03732     421     1444     0.561      399     
eco:b3780 ATP-dependent RNA helicase RhlB               K03732     421     1444     0.561      399     
ecj:JW3753 ATP-dependent RNA helicase                   K03732     421     1444     0.561      399     
ddd:Dda3937_00265 ATP-dependent RNA helicase            K03732     428     1443     0.561      408     
kpn:KPN_04281 ATP-dependent RNA helicase                K03732     421     1442     0.564      399     
ecs:ECs_4713 ATP-dependent RNA helicase                 K03732     421     1442     0.561      399     
ece:Z5290 putative ATP-dependent RNA helicase           K03732     421     1442     0.561      399     
smar:SM39_4343 putative ATP-dependent RNA helicase      K03732     428     1434     0.564      399     
enc:ECL_05004 ATP-dependent RNA helicase RhlB           K03732     421     1433     0.556      408     
vch:VC_0305 ATP-dependent RNA helicase RhlB             K03732     438     1433     0.569      397     
cro:ROD_39671 ATP-dependent RNA helicase                K03732     421     1432     0.559      399     
vpa:VP3002 ATP-dependent RNA helicase RhlB              K03732     437     1432     0.568      403     
seo:STM14_4712 ATP-dependent RNA helicase RhlB          K03732     421     1431     0.559      399     
sty:STY3640 putative ATP-dependent RNA helicase         K03732     421     1431     0.559      399     
stm:STM3914 putative helicase                           K03732     421     1431     0.559      399     
vfi:VF_0056 ATP-dependent RNA helicase                  K03732     432     1420     0.552      406     
eca:ECA4213 putative ATP-dependent RNA helicase         K03732     430     1404     0.542      404     
yps:YPTB0165 putative DEAD-box helicase                 K03732     428     1394     0.535      419     
ypk:y0359 putative ATP-dependent RNA helicase           K03732     428     1394     0.535      419     
ype:YPO3869 putative DEAD-box helicase                  K03732     428     1394     0.535      419     
son:SO_0407 ATP-dependent RNA helicase RhlB             K03732     439     1392     0.516      440     
pmu:PM1921 RhlB                                         K03732     423     1392     0.524      424     
eam:EAMY_0168 putative ATP-dependent RNA helicase       K03732     430     1383     0.515      433     
hin:HI_0892 ATP-dependent RNA helicase (rhlB)           K03732     418     1383     0.541      407     
gsu:GSU0522 ATP-dependent RNA helicase RhlB             K03732     443     1366     0.510      459     
apl:APL_0560 ATP-dependent RNA helicase RhlB            K03732     406     1348     0.535      396     
avn:Avin_11290 ATP-dependent RNA helicase RhlB          K03732     521     1164     0.477      386     
pae:PA3861 ATP-dependent RNA helicase RhlB              K03732     397     1143     0.472      386     
acb:A1S_2260 ATP-dependent RNA helicase (DEAD box)      K03732     383     1129     0.480      373     
yen:YE0166 putative DEAD-box helicase                   K03732     358     1123     0.521      349     
ppu:PP_1295 ATP-dependent RNA helicase RhlB             K03732     480     1112     0.464      386     
aci:ACIAD1314 ATP-dependent RNA helicase (DEAD box)     K03732     383     1100     0.472      373     
psb:Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helica K03732     485     1080     0.453      386     
pst:PSPTO_1253 ATP-dependent RNA helicase RhlB          K03732     397     1080     0.453      386     
rso:RSc2211 probable atp-dependent rna helicase protein K11927     495     1078     0.423      494     
bxe:Bxe_A0648 Putative ATP-dependent RNA helicase 1     K11927     543     1065     0.374      532     
bpe:BP3057 putative ATP-dependent RNA helicase                     574     1038     0.369      594     
sct:SCAT_4022 conserved protein of unknown function                789     1036     0.354      630     
eba:ebA4502 ATP-dependent RNA helicase                  K11927     491     1026     0.398      485     
reh:H16_A0531 ATP-dependent RNA helicase                K11927     520     1021     0.395      539     
bja:bll1447 dead-box ATP-dependent RNA helicase         K11927     530     1017     0.395      527     
rsp:RSP_0819 DEAD/DEAH box helicase                     K11927     461     1014     0.391      465     
lil:LA_3435 DEAD/DEAH box helicase                      K03732     540     1008     0.384      464     
bma:BMA1917 ATP-dependent RNA helicase RhlE             K11927     482     1002     0.395      484     
bps:BPSL1114 putative ATP-dependent RNA helicase 2      K11927     482     1002     0.395      484     
sgu:SGLAU_22145 ATP-dependent RNA helicase                         875      993     0.365      556     
rle:RL2594 putative cold-shock DeaD-box protein A (ATP-            521      987     0.384      539     
sgr:SGR_2359 putative ATP-dependent RNA helicase                   731      980     0.370      613     
rpa:TX73_019020 DEAD/DEAH box helicase                  K11927     473      970     0.398      475     
cre:CHLRE_12g522850v5 uncharacterized protein                     1036      965     0.361      585     
ccr:CC_0835 ATP-dependent RNA helicase, DEAD/DEAH box f K11927     476      964     0.373      485     
mca:MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box f K11927     453      960     0.392      475     
ksk:KSE_48730 putative ATP-dependent RNA helicase                  884      958     0.358      583     
lcb:LCABL_27300 ATP-dependent RNA helicase              K05592     502      958     0.356      486     
amd:AMED_1108 ATP-dependent RNA helicase                           598      952     0.368      543     
ret:RHE_CH02265 ATP dependent RNA helicase protein                 527      947     0.383      491     
sco:SCO5166 putative helicase                                      879      947     0.358      575     
btk:BT9727_0219 DEAD/DEAH box helicase                  K05592     528      946     0.377      494     
ban:BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box f K05592     528      946     0.377      494     
atu:Atu2333 ATP-dependent RNA helicase                  K11927     502      944     0.375      522     
sme:SM_b20880 putative ATP-dependent RNA helicase prote K11927     503      937     0.392      462     
efa:EF0846 ATP-dependent RNA helicase, DEAD/DEAH box fa K05592     536      935     0.406      379     
lpl:lp_0520 ATP-dependent RNA helicase                  K05592     528      934     0.378      423     
npu:Npun_R3595 DEAD/DEAH box helicase domain protein    K11927     443      932     0.385      442     
spr:spr1440 Conserved hypothetical protein              K05592     524      929     0.374      412     
spn:SP_1586 putative ATP-dependent RNA helicase         K05592     524      929     0.374      412     
rha:RHA1_ro06356 probable cold-shock DEAD-box protein              555      926     0.361      526     
nme:NMB1368 putative ATP-dependent RNA helicase                    462      926     0.377      462     
mlo:mll0224 probable ATP-dependent RNA helicase                    527      926     0.369      496     
bce:BC0259 ATP-dependent RNA helicase                   K05592     514      924     0.363      534     
bfr:BF1660 ATP-dependent RNA helicase DeaD              K11927     427      922     0.413      375     
spy:SPy_1415 putative ATP-dependent RNA helicase        K05592     539      920     0.361      410     
rru:Rru_A2718 DEAD/DEAH box helicase                               799      917     0.348      558     
ljo:LJ_0270 probable RNA helicase                       K05592     484      914     0.391      381     
ngo:NGO_0149 RNA helicase                               K11927     457      913     0.389      452     
bms:BR0938 ATP-dependent RNA helicase, DEAD/DEAH box fa            482      913     0.380      482     
bsu:BSU04580 ATP-dependent RNA helicase                 K05592     511      912     0.371      502     
ana:alr4718 ATP-dependent RNA helicase                  K11927     426      912     0.367      430     
bme:BMEI1035 ATP-dependent RNA helicase dead                       482      910     0.380      482     
bmf:BAB1_0955 ATP-dependent helicase, DEAD-box:DEAD/DEA            482      909     0.380      482     
osa:4341457 DEAD-box ATP-dependent RNA helicase 52A     K11594     602      909     0.362      527     
lin:lin0859 similar to ATP-dependent RNA helicase       K05592     516      906     0.363      487     
cte:CT0597 ATP-dependent RNA helicase DeaD              K05592     657      906     0.394      381     
cpe:CPE1396 ATP-dependent RNA helicase                  K05592     528      904     0.396      376     
aga:1276058 uncharacterized protein LOC1276058          K13178     660      903     0.335      547     
smu:SMU_611 putative ATP-dependent RNA helicase, DEAD-b K05592     517      903     0.374      423     
lla:L0339 ATP-dependent RNA helicase                    K05592     547      902     0.387      382     
mth:MTH_203 ATP-dependent RNA helicase, eIF-4A family   K05592     425      900     0.408      375     
lmo:lmo0866 ATP-dependent RNA helicase                  K05592     520      900     0.361      487     
mdm:103422642 DEAD-box ATP-dependent RNA helicase 20-li K12823     571      895     0.419      377     
llm:llmg_0369 ATP-dependent RNA helicase                K05592     551      895     0.387      382     
aag:5573418 ATP-dependent RNA helicase dbp2             K12823     699      892     0.318      600     
cbo:CBO0643 putative ATP-dependent RNA helicase rhle    K11927     425      890     0.396      374     
zma:109945984 DEAD-box ATP-dependent RNA helicase 40    K12823    1382      889     0.321      610     
bth:BT_0831 ATP-dependent RNA helicase                             422      886     0.358      436     
nmr:Nmar_1182 DEAD/DEAH box helicase domain protein     K05592     440      884     0.352      452     
mtu:Rv3211 ATP-dependent RNA helicase RhlE                         527      884     0.365      562     
mtc:MT3307 ATP-dependent RNA helicase DeaD                         527      884     0.365      562     
mtr:11432035 DEAD-box ATP-dependent RNA helicase 24     K12835     775      879     0.371      445     
gmx:100787545 DEAD-box ATP-dependent RNA helicase 20 is K12823     571      879     0.414      377     
vvi:100241725 DEAD-box ATP-dependent RNA helicase 24 is K12835     771      879     0.358      477     
sma:SAVERM_3098 putative ATP-dependent RNA helicase                759      879     0.348      564     
ame:408276 putative ATP-dependent RNA helicase Pl10     K11594     701      876     0.351      478     
mab:MAB_1403 Probable cold-shock DEAD box protein A hom K05592     598      875     0.342      526     
dvu:DVU_1982 ATP-dependent RNA helicase RhlE            K11927     462      875     0.373      475     
rcu:8282017 DEAD-box ATP-dependent RNA helicase 20 isof K12823     559      874     0.425      365     
cdi:DIP1018 DEAD-box helicase                           K05592     680      872     0.377      409     
cgl:Cgl1156 Superfamily II DNA and RNA helicases        K05592     732      870     0.393      364     
cit:102608201 DEAD-box ATP-dependent RNA helicase 46    K12823     703      867     0.366      483     
msm:MSMEG_1930 DEAD/DEAH box helicase                              502      866     0.355      543     
pde:Pden_1743 DEAD/DEAH box helicase domain protein     K11927     479      863     0.390      433     
csv:101219042 DEAD-box ATP-dependent RNA helicase 24    K12835     777      862     0.339      534     
lpn:lpg2345 ATP-dependent RNA helicase                  K05592     589      862     0.370      389     
dme:Dmel_CG10077 uncharacterized protein, isoform D     K12823     818      859     0.343      478     
sly:101264757 DEAD-box ATP-dependent RNA helicase 24    K12835     774      857     0.356      481     
ath:AT1G55150 DEA(D/H)-box RNA helicase family protein  K12823     501      857     0.382      398     
cau:Caur_3084 DEAD/DEAH box helicase domain protein     K05592     552      856     0.351      524     
wol:WD_1236 ATP-dependent RNA helicase, DeaD/DeaH box f            408      855     0.393      361     
bmor:101743381 uncharacterized protein LOC101743381     K13178     989      854     0.317      589     
pma:Pro_1094 Superfamily II DNA/RNA helicase            K05592     603      853     0.374      372     
hdu:HD_0213 ATP-dependent RNA helicase protein          K05590     442      852     0.362      439     
kla:KLLA0_F01034g uncharacterized protein               K11594     627      850     0.358      477     
xla:379975 DEAD-box helicase 3 X-linked L homeolog      K11594     697      850     0.355      471     
cac:CA_C0784 ATP-dependent RNA helicase, superfamily II K05592     374      850     0.397      378     
gvi:gll2325 ORF_ID:gll2325; probable ATP-dependent RNA             384      847     0.412      374     
gga:395447 probable ATP-dependent RNA helicase DDX4     K13982     663      846     0.391      389     
hsa:55510 DEAD-box helicase 43                          K17043     648      844     0.394      388     
cdf:CD630_07610 putative ATP-dependent RNA helicase     K05592     537      843     0.372      371     
sce:YNL112W DEAD-box ATP-dependent RNA helicase DBP2    K12823     546      843     0.361      460     
cfa:480886 ATP-dependent RNA helicase DDX3X isoform X1  K11594     663      842     0.348      471     
ssc:100515940 ATP-dependent RNA helicase DDX3X          K11594     661      842     0.347      467     
fca:101090417 ATP-dependent RNA helicase DDX3X isoform  K11594     662      841     0.340      477     
ecb:100058480 ATP-dependent RNA helicase DDX3X isoform  K11594     662      841     0.340      477     
mcc:706891 ATP-dependent RNA helicase DDX3X isoform X1  K11594     662      841     0.340      477     
xtr:394804 ATP-dependent RNA helicase DDX3X             K11594     699      841     0.351      479     
cel:CELE_Y71H2AM.19 ATP-dependent RNA helicase laf-1    K11594     708      840     0.354      492     
tps:THAPSDRAFT_31037 predicted protein                  K12823     480      839     0.357      457     
bta:510093 ATP-dependent RNA helicase DDX3X             K11594     661      839     0.340      477     
buc:BU372 ATP-dependent RNA helicase deaD               K05592     601      839     0.376      383     
sao:SAOUHSC_02316 DEAD-box ATP dependent DNA helicase   K05592     506      838     0.343      414     
mmp:MMP0457 Probable ATP dependent RNA helicase         K05592     538      838     0.324      531     
sau:SA1885 ORFID:SA1885; hypothetical protein, similar  K05592     506      838     0.343      414     
tca:656268 ATP-dependent RNA helicase belle             K11594     699      837     0.357      476     
ocu:100348597 ATP-dependent RNA helicase DDX3X isoform  K11594     661      836     0.345      467     
ser:SERP1688 ATP-dependent RNA helicase, DEAD/DEAH box  K05592     509      836     0.345      414     
tbr:Tb10.61.2130 ATP-dependent DEAD/H RNA helicase, put K11594     660      835     0.349      455     
mle:ML0811 putative ATP-dependent RNA helicase                     544      835     0.352      540     
ftu:FTT_1471c Cold-shock DEAD-box protein A             K05592     569      834     0.348      466     
mmu:110957 DNA segment, Chr 1, Pasteur Institute 1      K11594     660      832     0.340      476     
rno:364073 DEAD-box helicase 3                          K11594     659      832     0.340      476     
syn:slr0083 ATP-dependent RNA helicase; DeaD            K05592     492      831     0.372      422     
dre:566947 DEAD-box helicase 3 X-linked A               K11594     709      830     0.339      481     
aor:AO090011000563 unnamed protein product; ATP-depende K12823     554      826     0.377      387     
fps:FP1701 Probable ATP-dependent RNA helicase, DEAD/DE K11927     414      825     0.359      429     
cne:CNF01240 p68-like protein, putative                 K12823     540      825     0.348      465     
ani:ANIA_05931 DEAD-box ATP-dependent RNA helicase DBP2 K12823     563      822     0.378      394     
ddi:DDB_G0293168 DEAD/DEAH box helicase                 K12823     785      822     0.379      390     
ola:101159675 probable ATP-dependent RNA helicase DDX47 K14777     488      821     0.346      456     
pfa:PF3D7_1445900 ATP-dependent RNA helicase DDX5, puta K12823     527      819     0.383      386     
mdo:100032674 DEAD-box helicase 23                      K12858     818      819     0.362      412     
mgr:MGG_07718 ATP-dependent RNA helicase DRS1           K13181     799      819     0.358      438     
ncr:NCU01369 ATP-dependent RNA helicase ded-1           K11594     688      817     0.341      478     
tth:TT_C1895 heat resistant RNA dependent ATPase        K05592     517      815     0.397      383     
cal:CAALFM_CR09740WA RNA-dependent ATPase               K14777     534      814     0.359      435     
afm:AFUA_1G10050 DEAD/DEAH box RNA helicase             K12811    1211      810     0.320      588     
pti:PHATRDRAFT_bd920 hypothetical protein               K12823     575      808     0.358      452     
fgr:FGSG_01024 pre-mRNA-processing ATP-dependent RNA he K12811    1207      805     0.315      552     
lma:LMJF_32_0400 putative ATP-dependent RNA helicase    K11594     615      803     0.343      466     
hpy:HP_0247 ATP-dependent RNA helicase, DEAD-box family K05592     492      801     0.356      371     
hpj:jhp_0232 ATP-DEPENDENT RNA HELICASE DEAD            K05592     491      799     0.347      380     
tac:Ta0297 probable DEAD box protein                    K05592     388      790     0.385      353     
spo:2541383 ATP-dependent RNA helicase Dbp2             K12823     550      784     0.352      392     
tpa:TP_0770 ATP-dependent RNA helicase                  K05592     649      781     0.372      393     
fnu:FN1975 ATP-dependent RNA helicase                   K05592     528      781     0.356      374     
afu:AF_2254 ATP-dependent RNA helicase, DEAD-family (de K05592     368      769     0.361      371     
tde:TDE_2109 ATP-dependent RNA helicase, DEAD/DEAH box  K05592     570      762     0.370      354     
tko:TK0306 DEAD/DEAH box RNA helicase                   K05592     406      750     0.340      403     
mba:Mbar_A0145 ATP-dependent RNA helicase               K05592     579      748     0.366      352     
rco:RC1020 ATP-dependent RNA helicase RhlE                         414      748     0.357      353     
blo:BL0909 possible ATP-dependent RNA helicase                     728      746     0.289      620     
hth:HTH_0805 ATP-dependent RNA helicase                 K05592     365      743     0.358      372     
rpr:RP669 PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhl            407      725     0.357      347     
sso:SSO1889 ATP-dependent RNA helicase                             343      683     0.349      352     
sai:Saci_1090 ATP-dependent helicase                               340      674     0.368      359     
vg:80534482 Diachasmimorpha longicaudata entomopoxvirus            379      664     0.311      376     
aae:aq_613 ATP-dependent RNA helicase DeaD                         293      631     0.397      302     
mja:MJ_0669 ATP-dependent RNA helicase, DEAD-family (de K05592     367      627     0.311      373     
dra:DR_0335 ATP-dependent RNA helicase, putative                   478      574     0.317      457     
mpn:MPN_623 ATP-dependent RNA helicase deaD-like protei            450      538     0.289      425     
mge:MG_425 ATP-dependent RNA helicase, DEAD/DEAH box fa            449      504     0.285      435     
ape:APE_2188.1 putative ATP-dependent helicase          K03724     948      319     0.244      405     
hma:rrnAC1139 ATP-dependent helicase                    K03724     944      292     0.262      367     
pai:PAE2130 ATP-dependent helicase, putative            K03724     914      288     0.250      404     
hal:VNG_1251G ATP-dependent helicase                    K03724     946      280     0.251      367     
pfu:PF0592 ATP-dependent RNA helicase, putative         K06877     867      260     0.230      343     
hvo:HVO_2766 ATP-dependent DNA helicase                 K03724     918      224     0.232      366     
pab:PAB2313 Probable ATP-dependent RNA helicase         K03725     855      209     0.245      408     
tel:tlr0800 ATP-dependent DNA helicase                  K03654     483      199     0.215      376     
mta:Moth_0251 Excinuclease ABC subunit B                K03702     663      164     0.241      307     
syf:Synpcc7942_1301 ATP-dependent DNA helicase RecQ     K03654     487      163     0.218      357     
syc:syc0252_c ATP-dependent DNA helicase RecQ           K03654     473      163     0.218      357     
cje:Cj0680c excinuclease ABC subunit B                  K03702     657      163     0.197      385     
tma:TM0205 ATP-dependent DNA helicase                   K03655     780      157     0.227      321     
ctb:CTL0077 putative helicase                                     1163      147     0.263      152     
ctr:CT_708 helicase                                               1163      147     0.263      152     
cpn:CPn_0849 SWI/SNF family helicase_2                            1166      140     0.292      120     
bbu:BB_0827 ATP-dependent helicase HrpA                            823      129     0.207      261     

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