Entry
Name
Pathways of neurodegeneration - multiple diseases
Description
Neurodegeneration is generally defined as progressive, irreversible loss of neurons, which may affect either the peripheral or central nervous system (CNS). Neurodegenerative diseases (NDs) include highly debilitating illnesses, such as Alzheimer (AD), Parkinson disease (PD), amyotrophic lateral sclerosis, Huntington disease, spinocerebellar ataxias, and prion diseases (PrD). The hallmark event, which is thought to be at the root of these diseases, is the progressive accumulation of misfolded protein aggregates. Major basic processes include abnormal protein dynamics due to deficiency of the ubiquitin-proteosome-autophagy system, oxidative stress and free radical formation, endoplasmic reticulum stress, mitochondrial dysfunction and (secondary) disruptions of axonal transport.
Class
Human Diseases; Neurodegenerative disease
BRITE hierarchy
Pathway map
ko05022 Pathways of neurodegeneration - multiple diseases
Ortholog table
Orthology
K04520 amyloid beta A4 protein
K04380 microtubule-associated protein tau
K23600 TAR DNA-binding protein 43
K13098 RNA-binding protein FUS
K04129 muscarinic acetylcholine receptor M1
K04131 muscarinic acetylcholine receptor M3
K04133 muscarinic acetylcholine receptor M5
K23932 spectrin beta, non-erythrocytic 2
K04603 metabotropic glutamate receptor 1
K04604 metabotropic glutamate receptor 5
K04634 guanine nucleotide-binding protein G(q) subunit alpha
K04966 transient receptor potential cation channel subfamily C member 3
K20719 sigma non-opioid intracellular receptor
K04958 inositol 1,4,5-triphosphate receptor type 1
K04959 inositol 1,4,5-triphosphate receptor type 2
K04960 inositol 1,4,5-triphosphate receptor type 3
K15840 proenkephalin B (prodynorphin)
K05208 glutamate receptor ionotropic, NMDA 1
K05209 glutamate receptor ionotropic, NMDA 2A
K05210 glutamate receptor ionotropic, NMDA 2B
K05211 glutamate receptor ionotropic, NMDA 2C
K05212 glutamate receptor ionotropic, NMDA 2D
K04849 voltage-dependent calcium channel N type alpha-1B
K04850 voltage-dependent calcium channel L type alpha-1C
K04851 voltage-dependent calcium channel L type alpha-1D
K04853 voltage-dependent calcium channel L type alpha-1F
K04857 voltage-dependent calcium channel L type alpha-1S
K04809 nicotinic acetylcholine receptor alpha-7
K04505 presenilin 1 [EC:3.4.23.-]
K04522 presenilin 2 [EC:3.4.23.-]
K13525 transitional endoplasmic reticulum ATPase
K02927 ubiquitin-large subunit ribosomal protein L40e
K02977 ubiquitin-small subunit ribosomal protein S27Ae
K03061 26S proteasome regulatory subunit T1
K03062 26S proteasome regulatory subunit T2
K03063 26S proteasome regulatory subunit T3
K03064 26S proteasome regulatory subunit T4
K03065 26S proteasome regulatory subunit T5
K03066 26S proteasome regulatory subunit T6
K03028 26S proteasome regulatory subunit N1
K03032 26S proteasome regulatory subunit N2
K03033 26S proteasome regulatory subunit N3
K06693 26S proteasome regulatory subunit N4
K03035 26S proteasome regulatory subunit N5
K03036 26S proteasome regulatory subunit N6
K03037 26S proteasome regulatory subunit N7
K03038 26S proteasome regulatory subunit N8
K03039 26S proteasome regulatory subunit N9
K03029 26S proteasome regulatory subunit N10
K03030 26S proteasome regulatory subunit N11
K03031 26S proteasome regulatory subunit N12
K06691 26S proteasome regulatory subunit N13
K10881 26 proteasome complex subunit DSS1
K10707 vesicle-associated membrane protein-associated protein B
K09054 cyclic AMP-dependent transcription factor ATF-6 alpha
K04452 DNA damage-inducible transcript 3
K09027 X box-binding protein 1
K08852 serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]
K04440 mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) [EC:2.7.11.24 ]
K04741 caspase 12 [EC:3.4.22.-]
K08860 eukaryotic translation initiation factor 2-alpha kinase 3 [EC:2.7.11.1 ]
K03237 translation initiation factor 2 subunit 1
K04374 cyclic AMP-dependent transcription factor ATF-4
K05036 solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
K03942 NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2 ]
K03943 NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2 ]
K03944 NADH dehydrogenase (ubiquinone) flavoprotein 3
K03945 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
K03946 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
K03947 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3
K03948 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 4
K03949 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
K03950 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
K03951 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 7
K03952 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
K03953 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
K03954 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 10
K03955 NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
K03956 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 11
K11352 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
K11353 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
K03957 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 1
K03958 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2
K03959 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 3
K03960 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 4
K03961 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 5
K03962 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6
K03963 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
K03964 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8
K03965 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
K03966 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
K11351 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 11
K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:7.1.1.2 ]
K03935 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2 ]
K03936 NADH dehydrogenase (ubiquinone) Fe-S protein 3 [EC:7.1.1.2 ]
K03937 NADH dehydrogenase (ubiquinone) Fe-S protein 4
K03938 NADH dehydrogenase (ubiquinone) Fe-S protein 5
K03939 NADH dehydrogenase (ubiquinone) Fe-S protein 6
K03940 NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:7.1.1.2 ]
K03941 NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2 ]
K03967 NADH dehydrogenase (ubiquinone) 1 subunit C1
K03968 NADH dehydrogenase (ubiquinone) 1 subunit C2
K00234 succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1 ]
K00235 succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1 ]
K00236 succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
K00237 succinate dehydrogenase (ubiquinone) membrane anchor subunit
K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8 ]
K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
K00414 ubiquinol-cytochrome c reductase core subunit 1
K00415 ubiquinol-cytochrome c reductase core subunit 2
K00416 ubiquinol-cytochrome c reductase subunit 6
K00417 ubiquinol-cytochrome c reductase subunit 7
K00418 ubiquinol-cytochrome c reductase subunit 8
K00419 ubiquinol-cytochrome c reductase subunit 9
K00420 ubiquinol-cytochrome c reductase subunit 10
K02262 cytochrome c oxidase subunit 3
K02261 cytochrome c oxidase subunit 2
K02263 cytochrome c oxidase subunit 4
K02264 cytochrome c oxidase subunit 5a
K02265 cytochrome c oxidase subunit 5b
K02266 cytochrome c oxidase subunit 6a
K02267 cytochrome c oxidase subunit 6b
K02268 cytochrome c oxidase subunit 6c
K02270 cytochrome c oxidase subunit 7a
K02271 cytochrome c oxidase subunit 7b
K02272 cytochrome c oxidase subunit 7c
K02273 cytochrome c oxidase subunit 8
K02132 F-type H+-transporting ATPase subunit alpha
K02136 F-type H+-transporting ATPase subunit gamma
K02134 F-type H+-transporting ATPase subunit delta
K02135 F-type H+-transporting ATPase subunit epsilon
K02126 F-type H+-transporting ATPase subunit a
K02127 F-type H+-transporting ATPase subunit b
K02128 F-type H+-transporting ATPase subunit c
K02138 F-type H+-transporting ATPase subunit d
K02137 F-type H+-transporting ATPase subunit O
K02131 F-type H+-transporting ATPase subunit 6
K02125 F-type H+-transporting ATPase subunit 8
K02161 apoptosis regulator Bcl-2
K05862 voltage-dependent anion channel protein 1
K11518 mitochondrial import receptor subunit TOM40
K20858 calcium uniporter protein, mitochondrial
K04348 serine/threonine-protein phosphatase 2B catalytic subunit [EC:3.1.3.16 ]
K06268 serine/threonine-protein phosphatase 2B regulatory subunit
K02158 Bcl-2-antagonist of cell death
K04389 tumor necrosis factor ligand superfamily member 6
K04390 tumor necrosis factor receptor superfamily member 6
K02373 FAS-associated death domain protein
K04726 BH3 interacting domain death agonist
K02159 apoptosis regulator BAX
K14021 Bcl-2 homologous antagonist/killer
K09488 TNF receptor-associated protein 1
K15040 voltage-dependent anion channel protein 2
K15041 voltage-dependent anion channel protein 3
K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
K02084 apoptotic protease-activating factor
K04559 huntingtin interacting protein 1
K04638 intraflagellar transport protein 57
K04570 Bcl-2-like 1 (apoptosis regulator Bcl-X)
K21356 mitofusin 1 [EC:3.6.5.-]
K06030 mitofusin 2 [EC:3.6.5.-]
K10435 microtubule-associated protein 1 light chain
K12650 TRAF family member-associated NF-kappa-B activator
K23610 WD repeat-containing protein 41
K23611 guanine nucleotide exchange protein SMCR8
K23609 guanine nucleotide exchange protein C9orf72
K07901 Ras-related protein Rab-8A
K07925 Ras-related protein Rab-39B
K07874 Ras-related protein Rab-1A
K19730 autophagy-related protein 101
K08331 autophagy-related protein 13
K17589 RB1-inducible coiled-coil protein 1
K17985 activating molecule in BECN1-regulated autophagy protein 1
K17889 beclin 1-associated autophagy-related key regulator
K21246 nuclear receptor-binding factor 2
K17906 autophagy-related protein 2
K17908 autophagy-related protein 18
K17603 zinc finger FYVE domain-containing protein 1
K04575 amyotrophic lateral sclerosis 2 protein
K07887 Ras-related protein Rab-5A
K04392 Ras-related C3 botulinum toxin substrate 1
K12192 charged multivesicular body protein 2B
K22913 phosphatidylinositol 3,5-bisphosphate 5-phosphatase [EC:3.1.3.-]
K03156 tumor necrosis factor superfamily, member 2
K03158 tumor necrosis factor receptor superfamily member 1A
K05141 tumor necrosis factor receptor superfamily member 1B
K02308 death-associated protein 6
K04569 copper chaperone for superoxide dismutase
K04572 neurofilament light polypeptide
K04573 neurofilament medium polypeptide (neurofilament 3)
K04574 neurofilament heavy polypeptide
K10396 kinesin family member 5
K03115 casein kinase II subunit beta
K04355 brain-derived neurotrophic factor
K16576 actin-related protein 10
K04647 huntingtin-associated protein 1
K10408 dynein axonemal heavy chain
K10410 dynein axonemal light intermediate chain 1
K10409 dynein axonemal intermediate chain 1
K11143 dynein axonemal intermediate chain 2
K10411 dynein axonemal light chain 1
K10412 dynein axonemal light chain 4
K04515 calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17 ]
K11716 cyclin-dependent kinase 5 activator 1
K03209 wingless-type MMTV integration site family, member 1
K00182 wingless-type MMTV integration site family, member 2
K00312 wingless-type MMTV integration site family, member 3
K00408 wingless-type MMTV integration site family, member 4
K00444 wingless-type MMTV integration site family, member 5
K00445 wingless-type MMTV integration site family, member 6
K00572 wingless-type MMTV integration site family, member 7
K00714 wingless-type MMTV integration site family, member 8
K01064 wingless-type MMTV integration site family, member 9
K01357 wingless-type MMTV integration site family, member 10
K01384 wingless-type MMTV integration site family, member 11
K01558 wingless-type MMTV integration site family, member 16
K03068 low density lipoprotein receptor-related protein 5/6
K02353 segment polarity protein dishevelled
K03069 frequently rearranged in advanced T-cell lymphomas 1
K03096 frequently rearranged in advanced T-cell lymphomas 2
K02085 adenomatosis polyposis coli protein
K19722 receptor for advanced glycosylation end products
K08845 A-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1 ]
K04365 B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1 ]
K04366 RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1 ]
K21421 NADPH oxidase 2 [EC:1.-.-.-]
K21423 NADPH oxidase 4 [EC:1.6.3.-]
K04735 transcription factor p65
K02580 nuclear factor NF-kappa-B p105 subunit
K05453 macrophage colony-stimulating factor 1
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04599 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine
C11310 1-Methyl-4-phenylpyridinium
C16514 Amyloid beta protein 40
C16515 Amyloid beta protein 42
C21011 [Protein]-N(epsilon)-(carboxymethyl)lysine
C21012 [Protein]-N(epsilon)-(carboxyethyl)lysine
Reference
Authors
Gan L, Cookson MR, Petrucelli L, La Spada AR
Title
Converging pathways in neurodegeneration, from genetics to mechanisms.
Journal
Reference
Authors
Dugger BN, Dickson DW
Title
Pathology of Neurodegenerative Diseases.
Journal
Reference
Authors
Jellinger KA
Title
Basic mechanisms of neurodegeneration: a critical update.
Journal
Reference
Authors
Jellinger KA
Title
Recent advances in our understanding of neurodegeneration.
Journal
Reference
Authors
Van Bulck M, Sierra-Magro A, Alarcon-Gil J, Perez-Castillo A, Morales-Garcia JA
Title
Novel Approaches for the Treatment of Alzheimer's and Parkinson's Disease.
Journal
Reference
Authors
Ross CA, Poirier MA
Title
Protein aggregation and neurodegenerative disease.
Journal
Reference
Authors
Soto C, Pritzkow S
Title
Protein misfolding, aggregation, and conformational strains in neurodegenerative diseases.
Journal
Reference
Authors
Dantuma NP, Bott LC
Title
The ubiquitin-proteasome system in neurodegenerative diseases: precipitating factor, yet part of the solution.
Journal
Reference
Authors
Zheng C, Geetha T, Babu JR
Title
Failure of ubiquitin proteasome system: risk for neurodegenerative diseases.
Journal
Reference
Authors
Park H, Kang JH, Lee S
Title
Autophagy in Neurodegenerative Diseases: A Hunter for Aggregates.
Journal
Reference
Authors
Malik BR, Maddison DC, Smith GA, Peters OM
Title
Autophagic and endo-lysosomal dysfunction in neurodegenerative disease.
Journal
Reference
Authors
Metaxakis A, Ploumi C, Tavernarakis N
Title
Autophagy in Age-Associated Neurodegeneration.
Journal
Reference
Authors
Vidal RL, Matus S, Bargsted L, Hetz C
Title
Targeting autophagy in neurodegenerative diseases.
Journal
Reference
Authors
Menzies FM, Fleming A, Caricasole A, Bento CF, Andrews SP, Ashkenazi A, Fullgrabe J, Jackson A, Jimenez Sanchez M, Karabiyik C, Licitra F, Lopez Ramirez A, Pavel M, Puri C, Renna M, Ricketts T, Schlotawa L, Vicinanza M, Won H, Zhu Y, Skidmore J, Rubinsztein DC
Title
Autophagy and Neurodegeneration: Pathogenic Mechanisms and Therapeutic Opportunities.
Journal
Reference
Authors
Chu CT
Title
Mechanisms of selective autophagy and mitophagy: Implications for neurodegenerative diseases.
Journal
Reference
Authors
Kim I, Xu W, Reed JC
Title
Cell death and endoplasmic reticulum stress: disease relevance and therapeutic opportunities.
Journal
Reference
Authors
Doyle KM, Kennedy D, Gorman AM, Gupta S, Healy SJ, Samali A
Title
Unfolded proteins and endoplasmic reticulum stress in neurodegenerative disorders.
Journal
Reference
Authors
Halliday M, Hughes D, Mallucci GR
Title
Fine-tuning PERK signaling for neuroprotection.
Journal
Reference
Authors
Rozpedek-Kaminska W, Siwecka N, Wawrzynkiewicz A, Wojtczak R, Pytel D, Diehl JA, Majsterek I
Title
The PERK-Dependent Molecular Mechanisms as a Novel Therapeutic Target for Neurodegenerative Diseases.
Journal
Reference
Authors
Hetz C, Mollereau B
Title
Disturbance of endoplasmic reticulum proteostasis in neurodegenerative diseases.
Journal
Reference
Authors
Bezprozvanny I
Title
Calcium signaling and neurodegenerative diseases.
Journal
Reference
Authors
Ureshino RP, Erustes AG, Bassani TB, Wachilewski P, Guarache GC, Nascimento AC, Costa AJ, Smaili SS, Pereira GJDS
Title
The Interplay between Ca(2+) Signaling Pathways and Neurodegeneration.
Journal
Reference
Authors
Golpich M, Amini E, Mohamed Z, Azman Ali R, Mohamed Ibrahim N, Ahmadiani A
Title
Mitochondrial Dysfunction and Biogenesis in Neurodegenerative diseases: Pathogenesis and Treatment.
Journal
Reference
Authors
Morfini GA, Burns M, Binder LI, Kanaan NM, LaPointe N, Bosco DA, Brown RH Jr, Brown H, Tiwari A, Hayward L, Edgar J, Nave KA, Garberrn J, Atagi Y, Song Y, Pigino G, Brady ST
Title
Axonal transport defects in neurodegenerative diseases.
Journal
Reference
Authors
Gibbs KL, Greensmith L, Schiavo G
Title
Regulation of Axonal Transport by Protein Kinases.
Journal
Reference
Authors
Millecamps S, Julien JP
Title
Axonal transport deficits and neurodegenerative diseases.
Journal
Reference
Authors
Sleigh JN, Rossor AM, Fellows AD, Tosolini AP, Schiavo G
Title
Axonal transport and neurological disease.
Journal
Reference
Authors
Perlson E, Maday S, Fu MM, Moughamian AJ, Holzbaur EL
Title
Retrograde axonal transport: pathways to cell death?
Journal
Related pathway
ko04120 Ubiquitin mediated proteolysis
ko04141 Protein processing in endoplasmic reticulum
ko04933 AGE-RAGE signaling pathway in diabetic complications
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