Entry
Name
NOD-like receptor signaling pathway - Oncorhynchus tshawytscha (Chinook salmon)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
otw04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Oncorhynchus tshawytscha (Chinook salmon) [GN:
otw ]
Gene
112236465 nod1; nucleotide-binding oligomerization domain-containing protein 1 isoform X1 [KO:K08727 ]
112227907 nucleotide-binding oligomerization domain-containing protein 1-like [KO:K08727 ]
112227918 nucleotide-binding oligomerization domain-containing protein 1-like isoform X1 [KO:K08727 ]
112221359 ikbkg; LOW QUALITY PROTEIN: NF-kappa-B essential modulator [KO:K07210 ]
112256803 nfkbiab; nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [KO:K04734 ]
112239235 nod2; nucleotide-binding oligomerization domain-containing protein 2 isoform X1 [KO:K10165 ]
112241134 LOW QUALITY PROTEIN: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
121843572 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like [KO:K04403 ]
112250087 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
112217538 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
112250635 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
112252030 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 [KO:K12793 ]
112257314 june; junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448 ]
112253764 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
112252285 gabarapl2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
112229012 gamma-aminobutyric acid receptor-associated protein isoform X1 [KO:K08341 ]
112225868 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
112238146 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
112260042 gamma-aminobutyric acid receptor-associated protein-like [KO:K08341 ]
112252256 microtubule-associated proteins 1A/1B light chain 3B isoform X1 [KO:K10435 ]
112254127 map1lc3a; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
112265571 map1lc3c; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
112218432 map1lc3b; microtubule-associated proteins 1A/1B light chain 3B [KO:K10435 ]
112221163 map1lc3cl; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
112247489 ranBP-type and C3HC4-type zinc finger-containing protein 1-like [KO:K20894 ]
112226828 ranBP-type and C3HC4-type zinc finger-containing protein 1 [KO:K20894 ]
112233595 shrprbck1r; ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1 [KO:K10630 ] [EC:2.3.2.31 ]
112232758 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
112233830 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
112232756 thyroid receptor-interacting protein 6-like isoform X1 [KO:K12792 ]
112246336 baculoviral IAP repeat-containing protein 2-like isoform X1 [KO:K16060 ]
112247679 caspase recruitment domain-containing protein 9-like isoform X1 [KO:K12794 ]
112225188 LOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator-like [KO:K12650 ]
112252437 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
112231018 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
112230319 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
112249377 trpm7; transient receptor potential cation channel subfamily M member 7 isoform X1 [KO:K04982 ] [EC:2.7.11.1 ]
112227801 LOW QUALITY PROTEIN: G-protein coupled receptor family C group 6 member A [KO:K04622 ]
112244468 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
112217984 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
112246821 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
112251520 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
112254359 itpr1b; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
112262812 inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
112220132 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
112255286 inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 [KO:K04958 ]
112232084 inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
112218717 inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
112221364 inositol 1,4,5-trisphosphate receptor type 3-like isoform X1 [KO:K04960 ]
112258095 voltage-dependent anion-selective channel protein 1-like isoform X1 [KO:K05862 ]
112256114 vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
112219591 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
112262761 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
112248606 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
112257487 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
121840053 mcu; calcium uniporter protein, mitochondrial isoform X1 [KO:K20858 ]
112253649 cytochrome b-245 heavy chain-like isoform X1 [KO:K21421 ] [EC:1.-.-.-]
112266313 LOW QUALITY PROTEIN: cytochrome b-245 heavy chain-like [KO:K21421 ] [EC:1.-.-.-]
112231355 lys-63-specific deubiquitinase BRCC36 isoform X1 [KO:K11864 ] [EC:3.4.19.-]
112243578 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
112214566 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
112246932 proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
112252406 proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
112247476 proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
112218582 proline-serine-threonine phosphatase-interacting protein 1 isoform X1 [KO:K12804 ]
112253897 signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220 ]
112244575 stat1b; signal transducer and activator of transcription 1b [KO:K11220 ]
112235369 signal transducer and activator of transcription 1-alpha/beta isoform X3 [KO:K11220 ]
112253955 signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220 ]
112253779 signal transducer and activator of transcription 1-alpha/beta [KO:K11220 ]
112217577 stat2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221 ]
112227606 myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
otw04620 Toll-like receptor signaling pathway
KO pathway
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