Entry
Name
Focal adhesion - Trematomus bernacchii (emerald rockcod)
Description
Cell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the cell-extracellular matrix contact points, specialized structures are formed and termed focal adhesions, where bundles of actin filaments are anchored to transmembrane receptors of the integrin family through a multi-molecular complex of junctional plaque proteins. Some of the constituents of focal adhesions participate in the structural link between membrane receptors and the actin cytoskeleton, while others are signalling molecules, including different protein kinases and phosphatases, their substrates, and various adapter proteins. Integrin signaling is dependent upon the non-receptor tyrosine kinase activities of the FAK and src proteins as well as the adaptor protein functions of FAK, src and Shc to initiate downstream signaling events. These signalling events culminate in reorganization of the actin cytoskeleton; a prerequisite for changes in cell shape and motility, and gene expression. Similar morphological alterations and modulation of gene expression are initiated by the binding of growth factors to their respective receptors, emphasizing the considerable crosstalk between adhesion- and growth factor-mediated signalling.
Class
Cellular Processes; Cellular community - eukaryotes
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Trematomus bernacchii (emerald rockcod) [GN:
tben ]
Gene
117499360 col1a1a; LOW QUALITY PROTEIN: collagen, type I, alpha 1a [KO:K06236 ]
117489626 col2a1b; LOW QUALITY PROTEIN: collagen, type II, alpha 1b [KO:K19719 ]
117476214 col6a4a; LOW QUALITY PROTEIN: collagen alpha-6(VI) chain [KO:K06238 ]
117485843 col6a3; LOW QUALITY PROTEIN: uncharacterized protein col6a3 [KO:K06238 ]
117484386 platelet-derived growth factor subunit A-like isoform X1 [KO:K04359 ]
117492572 pdgfab; platelet-derived growth factor alpha polypeptide b [KO:K04359 ]
117492288 vegfab; vascular endothelial growth factor Ab isoform X1 [KO:K05448 ]
117498500 pgfa; vascular endothelial growth factor A isoform X1 [KO:K16859 ]
117474903 LOW QUALITY PROTEIN: vascular endothelial growth factor C-like [KO:K05449 ]
117470507 arhgap35a; LOW QUALITY PROTEIN: rho GTPase-activating protein 35 [KO:K05732 ]
117484785 myl2b; myosin, light chain 2b, regulatory, cardiac, slow [KO:K10351 ]
117486540 myl2a; myosin regulatory light chain 2, ventricular/cardiac muscle isoform isoform X1 [KO:K10351 ]
117472660 myl7; myosin regulatory light chain 2, atrial isoform [KO:K12754 ]
117482537 myosin regulatory light chain 2, smooth muscle minor isoform isoform X1 [KO:K12757 ]
117474089 mylpfb; myosin light chain, phosphorylatable, fast skeletal muscle b [KO:K12758 ]
117492766 mylpfa; myosin light chain, phosphorylatable, fast skeletal muscle a [KO:K12758 ]
117484759 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit A isoform X1 [KO:K06269 ] [EC:3.1.3.16 ]
117484918 ppp1r12a; protein phosphatase 1 regulatory subunit 12A isoform X1 [KO:K06270 ]
117479541 protein phosphatase 1 regulatory subunit 12B-like isoform X1 [KO:K12329 ]
117491940 zmp:0000001167; protein phosphatase 1 regulatory subunit 12A isoform X1 [KO:K17457 ]
117482399 ppp1r12c; LOW QUALITY PROTEIN: protein phosphatase 1 regulatory subunit 12C [KO:K17457 ]
117488315 LOW QUALITY PROTEIN: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like [KO:K00889 ] [EC:2.7.1.68 ]
117476062 LOW QUALITY PROTEIN: phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like [KO:K00889 ] [EC:2.7.1.68 ]
117491364 rasgrf1; ras-specific guanine nucleotide-releasing factor 1 [KO:K04349 ]
117471480 ras-specific guanine nucleotide-releasing factor 1-like [KO:K04349 ]
117472181 vasodilator-stimulated phosphoprotein-like isoform X1 [KO:K06274 ]
117470145 vaspb; vasodilator-stimulated phosphoprotein isoform X1 [KO:K06274 ]
117495884 pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
117475878 LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
117470004 pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922 ] [EC:2.7.1.153 ]
117494257 pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
117488737 LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
117495470 LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
117496245 phosphatidylinositol 3-kinase regulatory subunit gamma-like isoform X1 [KO:K02649 ]
117472990 phosphatidylinositol 3-kinase regulatory subunit alpha-like [KO:K02649 ]
117488414 phosphatidylinositol 3-kinase regulatory subunit gamma-like [KO:K02649 ]
117476544 pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649 ]
117488755 pik3r2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
117478908 vav2; guanine nucleotide exchange factor VAV2 isoform X1 [KO:K05730 ]
117500280 LOW QUALITY PROTEIN: guanine nucleotide exchange factor VAV3-like [KO:K05730 ]
117473618 rac3b; LOW QUALITY PROTEIN: ras-related C3 botulinum toxin substrate 3b [KO:K07861 ]
117491646 bcar1; LOW QUALITY PROTEIN: breast cancer anti-estrogen resistance protein 1 [KO:K05726 ]
117475715 LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1-like [KO:K06277 ]
117476613 rapgef1b; rap guanine nucleotide exchange factor 1b isoform X1 [KO:K06277 ]
117474460 june; junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448 ]
117481352 sos2; LOW QUALITY PROTEIN: son of sevenless homolog 2 [KO:K03099 ]
117483869 elk1; LOW QUALITY PROTEIN: ETS domain-containing protein Elk-1 [KO:K04375 ]
117490365 birc2; LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 2 [KO:K16060 ]
Compound
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
Reference
Authors
Berman AE, Kozlova NI, Morozevich GE.
Title
Integrins: structure and signaling.
Journal
Reference
Authors
Lee JW, Juliano R.
Title
Mitogenic signal transduction by integrin- and growth factor receptor-mediated pathways.
Journal
Mol Cells 17:188-202 (2004)
Reference
Authors
Danen EH, Yamada KM.
Title
Fibronectin, integrins, and growth control.
Journal
Reference
Authors
Guo W, Giancotti FG.
Title
Integrin signalling during tumour progression.
Journal
Reference
Authors
Petit V, Thiery JP.
Title
Focal adhesions: structure and dynamics.
Journal
Reference
Authors
Stupack DG, Cheresh DA.
Title
Get a ligand, get a life: integrins, signaling and cell survival.
Journal
Reference
Authors
Parsons JT.
Title
Focal adhesion kinase: the first ten years.
Journal
Reference
Authors
Mitra SK, Hanson DA, Schlaepfer DD.
Title
Focal adhesion kinase: in command and control of cell motility.
Journal
Reference
Authors
Comoglio PM, Boccaccio C, Trusolino L.
Title
Interactions between growth factor receptors and adhesion molecules: breaking the rules.
Journal
Reference
Authors
Schlaepfer DD, Mitra SK.
Title
Multiple connections link FAK to cell motility and invasion.
Journal
Reference
Authors
Burridge K, Wennerberg K.
Title
Rho and Rac take center stage.
Journal
Reference
Authors
Schmitz AA, Govek EE, Bottner B, Van Aelst L.
Title
Rho GTPases: signaling, migration, and invasion.
Journal
Reference
Authors
Vanhaesebroeck B, Alessi DR.
Title
The PI3K-PDK1 connection: more than just a road to PKB.
Journal
Reference
Authors
Nicholson KM, Anderson NG.
Title
The protein kinase B/Akt signalling pathway in human malignancy.
Journal
Reference
Authors
Oloumi A, McPhee T, Dedhar S.
Title
Regulation of E-cadherin expression and beta-catenin/Tcf transcriptional activity by the integrin-linked kinase.
Journal
Reference
Authors
Turner CE.
Title
Paxillin and focal adhesion signalling.
Journal
Reference
Authors
Hlobilkova A, Knillova J, Bartek J, Lukas J, Kolar Z.
Title
The mechanism of action of the tumour suppressor gene PTEN.
Journal
Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub 147:19-25 (2003)
Related pathway
tben04060 Cytokine-cytokine receptor interaction
tben04070 Phosphatidylinositol signaling system
KO pathway
LinkDB
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