Entry
Name
NOD-like receptor signaling pathway - Hylobates moloch (silvery gibbon)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
hmh04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Hylobates moloch (silvery gibbon) [GN:
hmh ]
Gene
116812602 NOD1; nucleotide-binding oligomerization domain-containing protein 1 isoform X1 [KO:K08727 ]
116483343 NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580 ]
116471250 NOD2; nucleotide-binding oligomerization domain-containing protein 2 [KO:K10165 ]
116458812 TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2 [KO:K04403 ]
116463159 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
116463202 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
116811588 TAB3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X2 [KO:K12793 ]
116459322 GABARAP; gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
116470809 GABARAPL2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
116463324 gamma-aminobutyric acid receptor-associated protein-like 3 [KO:K08341 ]
116472669 GABARAPL1; gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
116463648 gamma-aminobutyric acid receptor-associated protein-like 3 [KO:K08341 ]
116470731 MAP1LC3B; microtubule-associated proteins 1A/1B light chain 3B isoform X1 [KO:K10435 ]
116461498 MAP1LC3A; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
116479655 microtubule-associated proteins 1A/1B light chain 3B-like [KO:K10435 ]
116457645 MAP1LC3C; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
116457076 CARD6; LOW QUALITY PROTEIN: caspase recruitment domain-containing protein 6 [KO:K12797 ]
116476860 BIRC2; baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060 ]
116475862 CARD9; caspase recruitment domain-containing protein 9 [KO:K12794 ]
116810749 TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650 ]
116458363 NLRP1; NACHT, LRR and PYD domains-containing protein 1 [KO:K12798 ]
116471192 PYCARD; apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
116457664 NLRP3; NACHT, LRR and PYD domains-containing protein 3 [KO:K12800 ]
116482271 TRPM2; LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 2 [KO:K04977 ] [EC:3.6.1.13 ]
116481437 TRPM7; transient receptor potential cation channel subfamily M member 7 isoform X3 [KO:K04982 ] [EC:2.7.11.1 ]
116459027 TRPV2; transient receptor potential cation channel subfamily V member 2 [KO:K04971 ]
116466872 CASR; extracellular calcium-sensing receptor isoform X1 [KO:K04612 ]
116475834 GPRC6A; G-protein coupled receptor family C group 6 member A isoform X1 [KO:K04622 ]
116461202 PLCB4; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
116461370 PLCB1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X2 [KO:K05858 ] [EC:3.1.4.11 ]
116481969 PLCB2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X6 [KO:K05858 ] [EC:3.1.4.11 ]
116466681 ITPR1; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
116459671 ITPR3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
116811837 voltage-dependent anion-selective channel protein 1-like [KO:K05862 ]
116471501 VDAC1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
116459956 VDAC2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
116461833 VDAC3; voltage-dependent anion-selective channel protein 3 isoform X1 [KO:K15041 ]
116811225 BRCC3; lys-63-specific deubiquitinase BRCC36 [KO:K11864 ] [EC:3.4.19.-]
116471919 LOW QUALITY PROTEIN: lys-63-specific deubiquitinase BRCC36 [KO:K11864 ] [EC:3.4.19.-]
116478265 CARD8; caspase recruitment domain-containing protein 8 isoform X1 [KO:K12801 ]
116471725 IRGM; immunity-related GTPase family M protein [KO:K14139 ] [EC:3.6.5.-]
116471194 PYDC1; LOW QUALITY PROTEIN: pyrin domain-containing protein 1 [KO:K12802 ]
116480131 PYDC2; LOW QUALITY PROTEIN: pyrin domain-containing protein 2 [KO:K20911 ]
116482563 PSTPIP1; proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
116476195 LOW QUALITY PROTEIN: inactive caspase-12-like [KO:K04741 ] [EC:3.4.22.-]
116466560 NLRP6; NACHT, LRR and PYD domains-containing protein 6 isoform X1 [KO:K20863 ]
116479187 NLRP7; NACHT, LRR and PYD domains-containing protein 7 isoform X1 [KO:K20864 ]
116479703 NLRP12; NACHT, LRR and PYD domains-containing protein 12 isoform X2 [KO:K20865 ]
116467911 PYDC5; LOW QUALITY PROTEIN: pyrin domain-containing protein 5 [KO:K20916 ]
116810529 STAT1; signal transducer and activator of transcription 1-alpha/beta [KO:K11220 ]
116480910 STAT2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221 ]
116457855 LOW QUALITY PROTEIN: TIR domain-containing adapter molecule 1-like [KO:K05842 ]
116473667 MYD88; myeloid differentiation primary response protein MyD88 isoform X1 [KO:K04729 ]
116471574 STING1; stimulator of interferon genes protein isoform X1 [KO:K12654 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
hmh04620 Toll-like receptor signaling pathway
KO pathway
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