Entry
Name
NOD-like receptor signaling pathway - Oncorhynchus mykiss (rainbow trout)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
omy04621 NOD-like receptor signaling pathway
Ortholog table
Organism
Oncorhynchus mykiss (rainbow trout) [GN:
omy ]
Gene
110511898 nucleotide-binding oligomerization domain-containing protein 1 isoform X1 [KO:K08727 ]
110511923 nucleotide-binding oligomerization domain-containing protein 1 [KO:K08727 ]
110539162 nucleotide-binding oligomerization domain-containing protein 1 isoform X1 [KO:K08727 ]
110504918 LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit [KO:K02580 ]
100529152 nod2; nucleotide-binding oligomerization domain-containing protein 2 [KO:K10165 ]
110494935 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
110485597 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
110522153 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
110529530 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404 ]
110534958 tab3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
110524038 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
110536876 june; junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448 ]
110534218 gamma-aminobutyric acid receptor-associated protein isoform X1 [KO:K08341 ]
118944417 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
110509134 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
110537275 gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
100305187 gbrap; Gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
100305205 gbrl2; Gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
110513840 gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
110527665 map1lc3a; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
110489065 map1lc3cl; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
110493754 map1lc3c; microtubule-associated proteins 1A/1B light chain 3C [KO:K10435 ]
118941186 map1lc3b; microtubule-associated proteins 1A/1B light chain 3B [KO:K10435 ]
110508618 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1 [KO:K20894 ]
110530450 ranBP-type and C3HC4-type zinc finger-containing protein 1-like [KO:K20894 ]
110489702 shrprbck1r; ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1 [KO:K10630 ] [EC:2.3.2.31 ]
110514649 birc2; baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060 ]
110533228 baculoviral IAP repeat-containing protein 2 isoform X1 [KO:K16060 ]
110535743 caspase recruitment domain-containing protein 9 isoform X1 [KO:K12794 ]
110525340 card9; caspase recruitment domain-containing protein 9 isoform X1 [KO:K12794 ]
110527112 LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit epsilon-like [KO:K05410 ] [EC:2.7.11.10 ]
110501503 LOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator-like [KO:K12650 ]
110488391 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
110530050 apoptosis-associated speck-like protein containing a CARD isoform X1 [KO:K12799 ]
110516260 apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
110502207 trpm2; transient receptor potential cation channel subfamily M member 2 isoform X1 [KO:K04977 ] [EC:3.6.1.13 ]
110511716 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
110485107 G-protein coupled receptor family C group 6 member A-like [KO:K04622 ]
110510780 LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 [KO:K05858 ] [EC:3.1.4.11 ]
110500326 plcb3; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
110527884 itpr1b; LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 1 [KO:K04958 ]
110528182 inositol 1,4,5-trisphosphate receptor type 1 isoform X9 [KO:K04958 ]
110494246 inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
110494585 inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
110522681 inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
110497694 inositol 1,4,5-trisphosphate receptor type 2 isoform X1 [KO:K04959 ]
110492618 inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
110502625 vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
110536186 vdac3; voltage-dependent anion-selective channel protein 2 isoform X3 [KO:K15041 ]
110523828 zgc:56235; voltage-dependent anion-selective channel protein 2 isoform X2 [KO:K15041 ]
110537096 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
110525814 voltage-dependent anion-selective channel protein 2 isoform X1 [KO:K15041 ]
110509941 lys-63-specific deubiquitinase BRCC36 isoform X2 [KO:K11864 ] [EC:3.4.19.-]
110528612 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110528614 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110528615 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110497194 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110497197 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110511088 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110511715 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110512945 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
110512946 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
110513570 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
110515418 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
110517048 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X3 [KO:K12801 ]
118936495 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
118936810 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
118936811 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
118936812 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
118936814 NACHT, LRR and PYD domains-containing protein 1 homolog [KO:K12801 ]
118936856 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
110500402 NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1 [KO:K12801 ]
110495782 proline-serine-threonine phosphatase-interacting protein 1 isoform X1 [KO:K12804 ]
110506762 proline-serine-threonine phosphatase-interacting protein 1 isoform X1 [KO:K12804 ]
110526640 proline-serine-threonine phosphatase-interacting protein 1 isoform X1 [KO:K12804 ]
110521117 proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
110501544 stat1b; signal transducer and activator of transcription 1b isoform X1 [KO:K11220 ]
100136755 stat1-1; signal transducer/activator of transcription [KO:K11220 ]
100137016 stat1-2; signal transducer/activator of transcription [KO:K11220 ]
110520020 signal transducer and activator of transcription 1-alpha/beta isoform X2 [KO:K11220 ]
110527523 LOW QUALITY PROTEIN: uncharacterized protein LOC110527523 [KO:K11220 ]
110494323 stat2; signal transducer and activator of transcription 2 isoform X1 [KO:K11221 ]
100136123 myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
omy04620 Toll-like receptor signaling pathway
KO pathway
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