KEGG   PATHWAY: sscv05132
Entry
sscv05132                   Pathway                                
Name
Salmonella infection - Syngnathus scovelli (Gulf pipefish)
Description
Salmonella infection usually presents as a self-limiting gastroenteritis or the more severe typhoid fever and bacteremia. The common disease-causing Salmonella species in human is a single species, Salmonella enterica, which has numerous serovars.
Following intestinal colonization Salmonella inject effector proteins into the host cells using a type III secretion system (T3SS), T3SS1. Then a small group of effector proteins induce rearrangement of the actin cytoskeleton resulting in membrane ruffles and rapid internalization of the bacteria.The T3SS2 is responsible for translocating effector proteins that direct Salmonella-containing vacuole (SCV) maturation. The majority of the bacteria are known to survive and replicate in SCV.
Class
Human Diseases; Infectious disease: bacterial
Pathway map
sscv05132  Salmonella infection
sscv05132

Organism
Syngnathus scovelli (Gulf pipefish) [GN:sscv]
Gene
125992272  podocalyxin [KO:K06817]
125976207  receptor-type tyrosine-protein phosphatase C [KO:K06478] [EC:3.1.3.48]
125974838  RAB5A, member RAS oncogene family, b [KO:K07887]
125974077  ras-related protein Rab-5B [KO:K07888]
125983329  ras-related protein Rab-5C [KO:K07889]
125991530  ras-related protein Rab-5C-like [KO:K07889]
125983698  phosphatidylinositol 3-kinase catalytic subunit type 3 [KO:K00914] [EC:2.7.1.137]
125976790  ras-related protein Rab-7a [KO:K07897]
125977817  ras-related protein rab7-like [KO:K07897]
125991079  pleckstrin homology domain-containing family M member 1 [KO:K23282]
125982032  vacuolar protein sorting-associated protein 11 homolog [KO:K20179]
125989287  vacuolar protein sorting-associated protein 16 homolog [KO:K20180]
125990347  vacuolar protein sorting-associated protein 18 homolog [KO:K20181]
125993583  vacuolar protein sorting-associated protein 33A [KO:K20182]
125980975  vam6/Vps39-like protein isoform X1 [KO:K20183]
125985947  vacuolar protein sorting-associated protein 41 homolog isoform X1 [KO:K20184]
125972748  RILP-like protein 1 isoform X1 [KO:K13883]
125980448  cytoplasmic dynein 1 heavy chain 1 [KO:K10413]
125972185  LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1 [KO:K10414]
125984693  dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1 [KO:K10415]
125986956  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [KO:K10415]
125973378  dynein, cytoplasmic 1, intermediate chain 2a isoform X1 [KO:K10415]
125967323  cytoplasmic dynein 1 light intermediate chain 2 isoform X1 [KO:K10416]
125987362  cytoplasmic dynein 1 light intermediate chain 1 [KO:K10416]
125978814  cytoplasmic dynein 2 light intermediate chain 1-like isoform X1 [KO:K10417]
125982436  dynein light chain 2, cytoplasmic-like [KO:K10418]
125971832  dynein, light chain, LC8-type 2a [KO:K10418]
125994217  dynein light chain 1, cytoplasmic [KO:K10418]
125977613  dynein light chain roadblock-type 1 [KO:K10419]
125970999  dynein light chain roadblock-type 2-like [KO:K10419]
125971019  dynein light chain roadblock-type 2-like [KO:K10419]
125990220  dynein light chain Tctex-type 1 [KO:K10420]
125973776  dynein light chain Tctex-type 3 [KO:K10420]
125988480  dynein light chain Tctex-type 3-like isoform X1 [KO:K10420]
125966102  dynactin subunit 1a isoform X1 [KO:K04648]
125980479  dynactin subunit 1 isoform X1 [KO:K04648]
125977863  dynactin subunit 2 [KO:K10424]
125974969  dynactin subunit 3 isoform X1 [KO:K10425]
125984514  dynactin subunit 4 isoform X1 [KO:K10426]
125983548  dynactin subunit 5 isoform X1 [KO:K10427]
125968539  dynactin subunit 6 [KO:K10428]
125979398  actin related protein 1B [KO:K16575]
125990333  actin-related protein 10 [KO:K16576]
125967459  tubulin alpha-1C chain-like [KO:K07374]
125991304  tubulin alpha chain-like [KO:K07374]
125979494  tubulin alpha chain-like isoform X1 [KO:K07374]
125987728  tubulin alpha chain-like [KO:K07374]
125973667  tubulin alpha chain [KO:K07374]
125973669  tubulin alpha chain-like [KO:K07374]
125973670  tubulin alpha chain-like isoform X1 [KO:K07374]
125973671  tubulin alpha chain-like [KO:K07374]
125988281  tubulin alpha chain-like [KO:K07374]
125988476  tubulin alpha-1A chain-like isoform X1 [KO:K07374]
125988811  tubulin alpha-1B chain [KO:K07374]
125988812  tubulin alpha-1A chain-like [KO:K07374]
125968677  tubulin beta chain-like [KO:K07375]
125968760  tubulin beta chain-like [KO:K07375]
125965711  tubulin beta-1 chain [KO:K07375]
125965725  tubulin beta chain isoform X1 [KO:K07375]
125975730  tubulin beta-5 chain [KO:K07375]
125983866  tubulin beta-4B chain [KO:K07375]
125977499  tubulin beta chain-like isoform X1 [KO:K07375]
125984747  tubulin beta chain-like isoform X1 [KO:K07375]
125980930  tubulin beta-4B chain-like [KO:K07375]
125984995  FYVE and coiled-coil domain-containing protein 1-like isoform X1 [KO:K21954]
125971213  FYVE and coiled-coil domain-containing protein 1 isoform X1 [KO:K21954]
125976763  ADP-ribosylation factor-like protein 8B-A [KO:K07955]
125976809  ADP-ribosylation factor-like 8Bb [KO:K07955]
125988221  pleckstrin homology domain-containing family M member 2 isoform X1 [KO:K15348]
125977192  kinesin heavy chain [KO:K10396]
125984624  kinesin-1 heavy chain isoform X1 [KO:K10396]
125986326  kinesin-1 heavy chain-like isoform X1 [KO:K10396]
125988076  kinesin family member 5Aa isoform X1 [KO:K10396]
125978771  kinesin light chain 1b isoform X1 [KO:K10407]
125971763  kinesin light chain 3 [KO:K10407]
125972184  kinesin light chain 2-like isoform X1 [KO:K10407]
125980601  kinesin light chain 1 isoform X1 [KO:K10407]
125989849  Golgi resident protein GCP60 [KO:K23935]
125989406  rho-related GTP-binding protein RhoA-B [KO:K04513]
125977282  rho-related GTP-binding protein RhoA-B [KO:K04513]
125977389  rho-related GTP-binding protein RhoA-D isoform X1 [KO:K04513]
125987693  rho-related GTP-binding protein RhoA-C-like [KO:K04513]
125987963  rho-related GTP-binding protein RhoA-D-like isoform X1 [KO:K04513]
125988962  transforming protein RhoA-like [KO:K04513]
125975777  cation-dependent mannose-6-phosphate receptor [KO:K10089]
125973643  ras-related protein Rab-9A [KO:K07899]
125987964  ras-related protein Rab-9A-like [KO:K07899]
125979474  ras-related protein Rab-9B [KO:K07900]
125973650  GRIP and coiled-coil domain-containing protein 2 [KO:K20282]
125969021  syntaxin-10 [KO:K23937]
125967614  profilin-2-like [KO:K05759]
125976107  profilin-1-like [KO:K05759]
125984615  profilin 2a isoform X1 [KO:K05759]
125987852  filamin-A isoform X1 [KO:K04437]
125991643  exocyst complex component 7 isoform X1 [KO:K07195]
125980706  exocyst complex component 5 [KO:K19984]
125992547  exocyst complex component 4 [KO:K06111]
125970072  exocyst complex component 2 isoform X1 [KO:K17637]
125986171  ras-related protein Ral-A [KO:K07834]
125968594  actin, cytoplasmic 1 [KO:K05692]
125983149  actin, cytoplasmic 2 [KO:K05692]
125975454  protein S100-A10b [KO:K17274]
125990547  protein S100-A5-like [KO:K17274]
125987308  protein S100-A10a [KO:K17274]
125967436  annexin A2-like isoform X1 [KO:K17092]
125986773  annexin A2 isoform X1 [KO:K17092]
125980291  neuroblast differentiation-associated protein AHNAK isoform X1 [KO:K23934]
125971767  rho guanine nucleotide exchange factor 26-like isoform X1 [KO:K13744]
125982273  ras homolog gene family, member Gd [KO:K07863]
125982164  rho-related GTP-binding protein RhoG-like [KO:K07863]
125987403  engulfment and cell motility protein 1 isoform X1 [KO:K12366]
125977002  engulfment and cell motility protein 2 isoform X1 [KO:K18985]
125990297  rho-associated protein kinase 2-like isoform X1 [KO:K17388] [EC:2.7.11.1]
125981232  rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
125977049  myosin regulatory light chain 2a [KO:K10351]
125994207  myosin regulatory light chain 2, atrial isoform [KO:K12754]
125976841  myosin regulatory light polypeptide 9b [KO:K12755]
125984421  myosin, light chain 12, genome duplicate 2 [KO:K12757]
125986144  myosin, light chain 12, genome duplicate 1 [KO:K12757]
125983729  myosin regulatory light chain 2, skeletal muscle [KO:K12758]
125991041  myosin regulatory light chain 2, skeletal muscle [KO:K12758]
125982718  FH1/FH2 domain-containing protein 1-like isoform X1 [KO:K23938]
125975808  cell division cycle 42, like [KO:K04393]
125977899  cell division control protein 42 homolog isoform X1 [KO:K04393]
125983224  ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392]
125991571  ras-related C3 botulinum toxin substrate 1-like [KO:K04392]
125977790  nck-associated protein 1-like isoform X1 [KO:K05750]
125978091  nck-associated protein 1 isoform X1 [KO:K05750]
125967632  cytoplasmic FMR1-interacting protein 1 homolog [KO:K05749]
125993770  cytoplasmic FMR1-interacting protein 2 isoform X1 [KO:K05749]
125984829  abl interactor 1-like isoform X1 [KO:K23649]
125986243  abl interactor 1a isoform X1 [KO:K23649]
125977334  probable protein BRICK1 [KO:K05752]
125986219  wiskott-Aldrich syndrome protein family member 3b isoform X1 [KO:K06083]
125992296  zgc:109889; wiskott-Aldrich syndrome protein family member 3 isoform X1 [KO:K06083]
125981823  wiskott-Aldrich syndrome protein family member 3-like [KO:K06083]
125990208  zgc:101810; actin-related protein 2 [KO:K17260]
125978916  actin-related protein 2 [KO:K17260]
125989348  actin-related protein 3 [KO:K18584]
125973791  actin-related protein 3-like [KO:K18584]
125968697  actin-related protein 2/3 complex subunit 1A isoform X1 [KO:K05757]
125968698  actin-related protein 2/3 complex subunit 1B-B-like [KO:K05757]
125983965  zgc:86896; actin-related protein 2/3 complex subunit 1A-A [KO:K05757]
125972260  LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1B-B-like [KO:K05757]
125987949  actin-related protein 2/3 complex subunit 2 [KO:K05758]
125980006  actin-related protein 2/3 complex subunit 3 [KO:K05756]
125977068  actin-related protein 2/3 complex subunit 4 [KO:K05755]
125977448  actin-related protein 2/3 complex subunit 4 [KO:K05755]
125968998  actin-related protein 2/3 complex subunit 5b [KO:K05754]
125972898  serine/threonine-protein kinase PAK 1 [KO:K04409] [EC:2.7.11.1]
125981701  serine/threonine-protein kinase PAK 3 isoform X1 [KO:K05733] [EC:2.7.11.1]
125989812  myosin VIa isoform X1 [KO:K10358]
125980729  myosin VIb isoform X1 [KO:K10358]
125976273  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
125984586  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
125991958  zgc:158659; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
125972530  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
125988606  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
125992213  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform [KO:K21289] [EC:2.7.1.153]
125977587  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1 [KO:K00923] [EC:2.7.1.154]
125970872  phosphatidylinositol 3-kinase C2 domain-containing subunit gamma [KO:K00923] [EC:2.7.1.154]
125970915  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha [KO:K00923] [EC:2.7.1.154]
125975493  cytohesin-2 [KO:K18441]
125983216  cytohesin-3 isoform X1 [KO:K18441]
125983868  cytohesin-1a isoform X1 [KO:K18441]
125969006  cytohesin 4b isoform X1 [KO:K18441]
125991535  cytohesin-1-like isoform X1 [KO:K18441]
125991569  cytohesin-3 [KO:K18441]
125989959  ADP-ribosylation factor 6-like [KO:K07941]
125980489  ADP-ribosylation factor 6b [KO:K07941]
125984799  ADP-ribosylation factor 3-like [KO:K07937]
125984941  ADP-ribosylation factor 1-like [KO:K07937]
125991695  ADP-ribosylation factor 2b [KO:K07937]
125989840  sorting nexin-9b isoform X1 [KO:K17923]
125970375  sorting nexin-33 [KO:K17923]
125979511  sorting nexin-18-like [KO:K17923]
125994047  sorting nexin-18a [KO:K17923]
125970286  WASP like actin nucleation promoting factor a [KO:K23612]
125992333  WASP like actin nucleation promoting factor b isoform X1 [KO:K23612]
125968587  dynamin-2-like isoform X1 [KO:K23484] [EC:3.6.5.5]
125983814  dynamin-3 isoform X1 [KO:K23484] [EC:3.6.5.5]
125992420  toll-like receptor 1 [KO:K10169]
125975209  toll-like receptor 18 [KO:K10159]
125985752  myeloid differentiation primary response protein MyD88 [KO:K04729]
125990087  toll-like receptor 5 [KO:K10168]
125990132  toll-like receptor 5 [KO:K10168]
125970831  interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
125967623  TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
125990588  mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
125981195  mitogen-activated protein kinase kinase kinase 7-like [KO:K04427] [EC:2.7.11.25]
125968686  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1 [KO:K04403]
125990574  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
125969512  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 [KO:K12793]
125987862  NF-kappa-B essential modulator isoform X1 [KO:K07210]
125978312  inhibitor of nuclear factor kappa-B kinase subunit alpha-like [KO:K04467] [EC:2.7.11.10]
125991640  inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
125994011  inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
125990151  NF-kappa-B inhibitor alpha-like [KO:K04734]
125981255  nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [KO:K04734]
125992036  nuclear factor NF-kappa-B p105 subunit [KO:K02580]
125982490  transcription factor p65 isoform X1 [KO:K04735]
125990225  heat shock protein HSP 90-beta [KO:K04079]
125990352  heat shock protein HSP 90-alpha [KO:K04079]
125990353  heat shock protein HSP 90-alpha 1 [KO:K04079]
125970665  endoplasmin [KO:K09487]
125985164  receptor-interacting serine/threonine-protein kinase 2-like isoform X1 [KO:K08846] [EC:2.7.11.1]
125976856  exportin-2 [KO:K18423]
125972522  importin subunit alpha-3 [KO:K23583]
125973605  importin subunit alpha-4 [KO:K23583]
125972384  40S ribosomal protein S3 [KO:K02985]
125970651  HRas proto-oncogene, GTPase a [KO:K02833]
125987804  raf-1 proto-oncogene, serine/threonine kinase a isoform X1 [KO:K04366] [EC:2.7.11.1]
125971154  dual specificity mitogen-activated protein kinase kinase 1 isoform X1 [KO:K04368] [EC:2.7.12.2]
125965738  dual specificity mitogen-activated protein kinase kinase 2a [KO:K04369] [EC:2.7.12.2]
125983683  mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
125994114  mitogen-activated protein kinase 1 isoform X1 [KO:K04371] [EC:2.7.11.24]
125983484  dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
125989238  mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
125977868  mitogen-activated protein kinase 14B isoform X1 [KO:K04441] [EC:2.7.11.24]
125971308  mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
125992018  mitogen-activated protein kinase 12-like [KO:K04441] [EC:2.7.11.24]
125992019  mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
125987820  mitogen-activated protein kinase 14A isoform X1 [KO:K04441] [EC:2.7.11.24]
125988619  zgc:171775; STKc_p38 domain-containing protein [KO:K04441] [EC:2.7.11.24]
125983614  dual specificity mitogen-activated protein kinase kinase 4a isoform X1 [KO:K04430] [EC:2.7.12.2]
125991606  dual specificity mitogen-activated protein kinase kinase 4b isoform X1 [KO:K04430] [EC:2.7.12.2]
125969589  dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
125983268  mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
125978334  mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
125990945  mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
125980080  mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
125990318  v-fos FBJ murine osteosarcoma viral oncogene homolog Ab [KO:K04379]
125990320  si:ch211-153j24.3; protein c-Fos [KO:K04379]
125981396  protein c-Fos [KO:K04379]
125976226  transcription factor AP-1 [KO:K04448]
125984729  transcription factor Jun-like [KO:K04448]
125979215  junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448]
125986686  tumor necrosis factor a (TNF superfamily, member 2) [KO:K03156]
125994186  interleukin-1 beta [KO:K04519]
125969265  interleukin-8 [KO:K10030]
125987359  catenin beta-1-like [KO:K02105]
125974642  catenin beta-1 isoform X1 [KO:K02105]
125982336  transcription factor 7 isoform X1 [KO:K02620]
125993929  transcription factor 7-like 1-B isoform X1 [KO:K04490]
125991191  transcription factor 7-like 2 isoform X1 [KO:K04491]
125969039  lymphoid enhancer-binding factor 1 isoform X1 [KO:K04492]
125986048  transcriptional regulator Myc-A [KO:K04377]
125984063  serine/threonine-protein kinase N1b isoform X1 [KO:K06071] [EC:2.7.11.13]
125969588  serine/threonine-protein kinase N1 isoform X1 [KO:K06071] [EC:2.7.11.13]
125967025  F-box only protein 22 isoform X1 [KO:K10302]
125982419  S-phase kinase-associated protein 1 [KO:K03094]
125975753  tumor necrosis factor receptor superfamily member 1A [KO:K03158]
125979284  TNF receptor-associated factor 2-like [KO:K03173] [EC:2.3.2.27]
125979942  TNF receptor-associated factor 2 [KO:K03173] [EC:2.3.2.27]
125994759  TNF receptor-associated factor 2-like isoform X1 [KO:K03173] [EC:2.3.2.27]
125967776  tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
125982312  baculoviral IAP repeat-containing protein 2 [KO:K16060]
125984782  receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
125975769  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
125986316  tumor necrosis factor ligand superfamily member 10-like [KO:K04721]
125981078  tumor necrosis factor ligand superfamily member 10-like [KO:K04721]
125965720  hematopoietic death receptor isoform X1 [KO:K04722]
125979541  tumor necrosis factor receptor superfamily, member a [KO:K04722]
125966915  protein FADD isoform X1 [KO:K02373]
125984830  caspase-8 [KO:K04398] [EC:3.4.22.61]
125966926  zgc:153993; apoptosis regulator BAX [KO:K02159]
125983773  apoptosis regulator BAX-like [KO:K02159]
125978141  cytochrome c [KO:K08738]
125987116  cytochrome c iso-1/iso-2-like [KO:K08738]
125973423  cytochrome c-like [KO:K08738]
125984498  apoptosis regulator Bcl-2 [KO:K02161]
125969100  caspase-3a [KO:K02187] [EC:3.4.22.56]
125977455  caspase-3-like [KO:K02187] [EC:3.4.22.56]
125991792  caspase-7 [KO:K04397] [EC:3.4.22.60]
125990643  rho-related GTP-binding protein RhoB-like [KO:K07856]
125968574  rho-related GTP-binding protein RhoH [KO:K07873]
125968917  RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
125979009  RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
125972506  RAC-beta serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
125980688  RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
125976211  thioredoxin [KO:K03671]
125984183  thioredoxin, mitochondrial [KO:K03671]
125972695  caspase a-like isoform X1 [KO:K01370] [EC:3.4.22.36]
125972696  caspase a-like [KO:K01370] [EC:3.4.22.36]
Compound
C00338  Lipopolysaccharide
C01194  1-Phosphatidyl-D-myo-inositol
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11554  1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate
Reference
PMID:28875943
  Authors
Bernal-Bayard J, Ramos-Morales F
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pathway
sscv04010  MAPK signaling pathway
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sscv04217  Necroptosis
sscv04621  NOD-like receptor signaling pathway
KO pathway
ko05132   
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