KEGG   PATHWAY: ocu04668
Entry
ocu04668                    Pathway                                
Name
TNF signaling pathway - Oryctolagus cuniculus (rabbit)
Description
Tumor necrosis factor (TNF), as a critical cytokine, can induce a wide range of intracellular signal pathways including apoptosis and cell survival as well as inflammation and immunity. Activated TNF is assembled to a homotrimer and binds to its receptors (TNFR1, TNFR2) resulting in the trimerization of TNFR1 or TNFR2. TNFR1 is expressed by nearly all cells and is the major receptor for TNF (also called TNF-alpha). In contrast, TNFR2 is expressed in limited cells such as CD4 and CD8 T lymphocytes, endothelial cells, microglia, oligodendrocytes, neuron subtypes, cardiac myocytes, thymocytes and human mesenchymal stem cells. It is the receptor for both TNF and LTA (also called TNF-beta). Upon binding of the ligand, TNFR mediates the association of some adaptor proteins such as TRADD or TRAF2, which in turn initiate recruitment of signal transducers. TNFR1 signaling induces activation of many genes, primarily controlled by two distinct pathways, NF-kappa B pathway and the MAPK cascade, or apoptosis and necroptosis. TNFR2 signaling activates NF-kappa B pathway including PI3K-dependent NF-kappa B pathway and JNK pathway leading to survival.
Class
Environmental Information Processing; Signal transduction
Pathway map
ocu04668  TNF signaling pathway
ocu04668

Other DBs
GO: 0033209
Organism
Oryctolagus cuniculus (rabbit) [GN:ocu]
Gene
100008609  FAS; tumor necrosis factor receptor superfamily member 6 precursor [KO:K04390]
100008716  [KO:K05506]
100008733  IL6; interleukin-6 precursor [KO:K05405]
100008840  CASP3; caspase-3 [KO:K02187] [EC:3.4.22.56]
100008856  JUN; transcription factor Jun [KO:K04448]
100008901  VCAM1; vascular cell adhesion protein 1 precursor [KO:K06527]
100008990  IL1B; interleukin-1 beta precursor [KO:K04519]
100008993  MMP9; matrix metalloproteinase-9 precursor [KO:K01403] [EC:3.4.24.35]
100009017  IL15; interleukin-15 precursor [KO:K05433]
100009088  TNF; tumor necrosis factor precursor [KO:K03156]
100009111  MMP3; stromelysin-1 preproprotein [KO:K01394] [EC:3.4.24.17]
100009130  CCL2; C-C motif chemokine 2 precursor [KO:K14624]
100009151  SELE; E-selectin precursor [KO:K06494]
100009245  GRO-A; GRO alpha protein precursor [KO:K05505]
100009248  PTGS2; prostaglandin G/H synthase 2 precursor [KO:K11987] [EC:1.14.99.1]
100009270  EDN1; endothelin-1 precursor [KO:K16366]
100009316  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
100009598  MMP14; matrix metalloproteinase-14 precursor [KO:K07763] [EC:3.4.24.80]
100101580  CASP10; caspase-10 [KO:K04400] [EC:3.4.22.63]
100101591  [KO:K04397] [EC:3.4.22.60]
100101613  [KO:K06059] [EC:3.4.24.86]
100303768  IL18R1; interleukin-18 receptor 1 precursor [KO:K05173]
100328583  GRO-B; permeability factor 2 [KO:K05505]
100328700  XIAP; E3 ubiquitin-protein ligase XIAP [KO:K04725] [EC:2.3.2.27]
100328720  CSF2; granulocyte-macrophage colony-stimulating factor precursor [KO:K05427]
100328724  IRF1; interferon regulatory factor 1 [KO:K09444]
100328799  RHBDF1; inactive rhomboid protein 1 [KO:K27588]
100328905  IKBKG; NF-kappa-B essential modulator [KO:K07210]
100328931  LTA; lymphotoxin-alpha precursor [KO:K05468]
100337822  [KO:K00922] [EC:2.7.1.153]
100337888  [KO:K03171]
100337999  [KO:K04440] [EC:2.7.11.24]
100338090  [KO:K05449]
100338118  [KO:K16060]
100338211  [KO:K05449]
100338345  [KO:K04379]
100338577  [KO:K05453]
100338700  [KO:K15637] [EC:3.1.3.16]
100338814  [KO:K17065] [EC:3.6.5.5]
100338847  [KO:K03172]
100339383  [KO:K04374]
100339551  [KO:K06052]
100339678  [KO:K12793]
100339953  [KO:K04432] [EC:2.7.12.2]
100340005  [KO:K09849]
100340120  [KO:K16060]
100340498  [KO:K04426] [EC:2.7.11.25]
100341695  [KO:K04441] [EC:2.7.11.24]
100342249  [KO:K04404]
100342664  [KO:K04440] [EC:2.7.11.24]
100342852  [KO:K04456] [EC:2.7.11.1]
100342931  [KO:K05415]
100343130  [KO:K09048]
100343571  [KO:K04427] [EC:2.7.11.25]
100344161  [KO:K04441] [EC:2.7.11.24]
100344453  [KO:K10048]
100344852  [KO:K04430] [EC:2.7.12.2]
100345181  [KO:K00922] [EC:2.7.1.153]
100345250  [KO:K02649]
100345253  [KO:K04725] [EC:2.3.2.27]
100345475  [KO:K09048]
100345640  [KO:K06490]
100346106  [KO:K03158]
100346186  [KO:K05508]
100346929  [KO:K04440] [EC:2.7.11.24]
100346964  [KO:K04724]
100347345  [KO:K04371] [EC:2.7.11.24]
100348266  [KO:K12499]
100348477  [KO:K04398] [EC:3.4.22.61]
100348520  [KO:K04445] [EC:2.7.11.1]
100348561  [KO:K04371] [EC:2.7.11.24]
100348663  [KO:K00922] [EC:2.7.1.153]
100349426  [KO:K02580]
100349872  [KO:K05141]
100350259  [KO:K11859] [EC:3.4.19.12]
100350614  [KO:K04441] [EC:2.7.11.24]
100351032  [KO:K04466] [EC:2.7.11.25]
100351999  [KO:K05870]
100352965  [KO:K02861] [EC:2.7.11.1]
100353112  [KO:K12671]
100353212  [KO:K09558]
100353706  [KO:K04456] [EC:2.7.11.1]
100354572  [KO:K08601] [EC:3.4.19.12]
100355230  [KO:K04433] [EC:2.7.12.2]
100355251  [KO:K27588]
100355367  [KO:K04450]
100355566  [KO:K04415] [EC:2.7.11.25]
100355888  [KO:K04467] [EC:2.7.11.10]
100356401  [KO:K07209] [EC:2.7.11.10]
100356594  [KO:K10165]
100356696  [KO:K05632] [EC:2.3.2.26]
100357341  [KO:K04734]
100357483  [KO:K09047]
100357489  [KO:K09049]
100357841  [KO:K02649]
100357876  [KO:K09048]
100358175  [KO:K09048]
100358246  [KO:K04403]
100358752  [KO:K23972]
100358914  LIF; leukemia inhibitory factor precursor [KO:K05419]
100359083  [KO:K03174]
100359244  [KO:K19901]
103345313  [KO:K04431] [EC:2.7.12.2]
103346035  [KO:K04441] [EC:2.7.11.24]
103346588  [KO:K04696]
103346785  [KO:K16510] [EC:2.7.11.1]
103348897  [KO:K14625]
127485184  [KO:K04735]
127486116  [KO:K04456] [EC:2.7.11.1]
127487649  [KO:K10165]
127487650  [KO:K08601] [EC:3.4.19.12]
127488466  [KO:K09028]
127489461  [KO:K04368] [EC:2.7.12.2]
127493063  [KO:K09049]
Reference
  Authors
Chu WM
  Title
Tumor necrosis factor.
  Journal
Cancer Lett 328:222-5 (2013)
DOI:10.1016/j.canlet.2012.10.014
Reference
  Authors
Shuh M, Bohorquez H, Loss GE Jr, Cohen AJ
  Title
Tumor Necrosis Factor-alpha: Life and Death of Hepatocytes During Liver Ischemia/Reperfusion Injury.
  Journal
Ochsner J 13:119-30 (2013)
Reference
  Authors
MacEwan DJ
  Title
TNF receptor subtype signalling: differences and cellular consequences.
  Journal
Cell Signal 14:477-92 (2002)
DOI:10.1016/S0898-6568(01)00262-5
Reference
  Authors
Newton K, Dixit VM
  Title
Signaling in innate immunity and inflammation.
  Journal
Cold Spring Harb Perspect Biol 4:a006049 (2012)
DOI:10.1101/cshperspect.a006049
Reference
  Authors
Pomerantz JL, Baltimore D
  Title
NF-kappaB activation by a signaling complex containing TRAF2, TANK and TBK1, a novel IKK-related kinase.
  Journal
EMBO J 18:6694-704 (1999)
DOI:10.1093/emboj/18.23.6694
Reference
  Authors
Naude PJ, den Boer JA, Luiten PG, Eisel UL
  Title
Tumor necrosis factor receptor cross-talk.
  Journal
FEBS J 278:888-98 (2011)
DOI:10.1111/j.1742-4658.2011.08017.x
Reference
  Authors
Faustman D, Davis M
  Title
TNF receptor 2 pathway: drug target for autoimmune diseases.
  Journal
Nat Rev Drug Discov 9:482-93 (2010)
DOI:10.1038/nrd3030
Reference
  Authors
Chan FK, Shisler J, Bixby JG, Felices M, Zheng L, Appel M, Orenstein J, Moss B, Lenardo MJ
  Title
A role for tumor necrosis factor receptor-2 and receptor-interacting protein in programmed necrosis and antiviral responses.
  Journal
J Biol Chem 278:51613-21 (2003)
DOI:10.1074/jbc.M305633200
Reference
  Authors
Lee MY, Nam KH, Choi KC
  Title
iRhoms; Its Functions and Essential Roles.
  Journal
Biomol Ther (Seoul) 24:109-14 (2016)
DOI:10.4062/biomolther.2015.149
Related
pathway
ocu04010  MAPK signaling pathway
ocu04064  NF-kappa B signaling pathway
ocu04120  Ubiquitin mediated proteolysis
ocu04151  PI3K-Akt signaling pathway
ocu04210  Apoptosis
KO pathway
ko04668   

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