Entry
Name
NOD-like receptor signaling pathway - Rattus norvegicus (rat)
Description
Specific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains more than 20 members in mammals and plays a pivotal role in the recognition of intracellular ligands. NOD1 and NOD2, two prototypic NLRs, sense the cytosolic presence of the bacterial peptidoglycan fragments that escaped from endosomal compartments, driving the activation of NF-{kappa}B and MAPK, cytokine production and apoptosis. On the other hand, a different set of NLRs induces caspase-1 activation through the assembly of multiprotein complexes called inflammasomes. The activated of caspase-1 regulates maturation of the pro-inflammatory cytokines IL-1B, IL-18 and drives pyroptosis.
Class
Organismal Systems; Immune system
BRITE hierarchy
Pathway map
rno04621 NOD-like receptor signaling pathway
Organism
Rattus norvegicus (rat) [GN:
rno ]
Gene
103692848 Brcc3dc; BRCA1/BRCA2-containing complex, subunit 3, domain containing [KO:K11864 ] [EC:3.4.19.-]
120098596 Gabarapl4; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
171390 Nlrp6; NACHT, LRR and PYD domains-containing protein 6 [KO:K20863 ]
191568 Naip6; NLR family, apoptosis inhibitory protein 6 [KO:K12807 ]
24247 Casr; extracellular calcium-sensing receptor precursor [KO:K04612 ]
24654 Plcb1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 [KO:K05858 ] [EC:3.1.4.11 ]
24770 Ccl2; C-C motif chemokine 2 precursor [KO:K14624 ]
24888 Bcl2l1; bcl-2-like protein 1 isoform 2 [KO:K04570 ]
25031 Plcb4; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 [KO:K05858 ] [EC:3.1.4.11 ]
25124 Stat1; signal transducer and activator of transcription 1-alpha/beta isoform beta [KO:K11220 ]
25262 Itpr1; inositol 1,4,5-trisphosphate receptor type 1 isoform 3 [KO:K04958 ]
252961 Tank; TRAF family member-associated NF-kappa-B activator isoform 2 [KO:K12650 ]
25679 Itpr3; inositol 1,4,5-trisphosphate receptor type 3 [KO:K04960 ]
266610 Fadd; FAS-associated death domain protein [KO:K02373 ]
282817 Pycard; apoptosis-associated speck-like protein containing a CARD [KO:K12799 ]
286995 Defa5; neutrophil antibiotic peptide NP-2 precursor [KO:K05230 ]
287362 Nlrp3; NACHT, LRR and PYD domains-containing protein 3 [KO:K12800 ]
287562 Ccl12; C-C motif chemokine ligand 12 precursor [KO:K14624 ]
288264 Ifnar1; interferon alpha/beta receptor 1 isoform 1 precursor [KO:K05130 ]
288774 Stat2; signal transducer and activator of transcription 2 [KO:K11221 ]
291912 Nod2; nucleotide-binding oligomerization domain-containing protein 2 [KO:K10165 ]
292541 Nlrp12; NACHT, LRR and PYD domains-containing protein 12 [KO:K20865 ]
29322 Plcb3; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 [KO:K05858 ] [EC:3.1.4.11 ]
294329 Trpm2; transient receptor potential cation channel subfamily M member 2 [KO:K04977 ] [EC:3.6.1.13 ]
294394 Gprc6a; G-protein coupled receptor family C group 6 member A precursor [KO:K04622 ]
294560 Mcu; calcium uniporter protein, mitochondrial precursor [KO:K20858 ]
29465 Trpv2; transient receptor potential cation channel subfamily V member 2 [KO:K04971 ]
294691 Naip5; baculoviral IAP repeat-containing protein 1f isoform X2 [KO:K12807 ]
294770 Card6; caspase recruitment domain-containing protein 6 [KO:K12797 ]
297173 RSA-14-44; ras homolog gene family, member A [KO:K04513 ]
298213 Ifna2; interferon alpha family, gene 2 precursor [KO:K05414 ]
298784 Nlrc4; NLR family CARD domain-containing protein 4 [KO:K12805 ]
299331 Hsp90aa1; heat shock protein HSP 90-alpha [KO:K04079 ]
300732 Pstpip1; proline-serine-threonine phosphatase-interacting protein 1 [KO:K12804 ]
301059 Myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
303090 Irgm; immunity-related GTPase family M protein [KO:K14139 ] [EC:3.6.5.-]
304987 Aim2; interferon-inducible protein AIM2 isoform X1 [KO:K12966 ]
305633 Antxr2; anthrax toxin receptor 2 precursor [KO:K20909 ]
308267 Tab2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404 ]
311430 Mavs; mitochondrial antiviral-signaling protein [KO:K12648 ]
315139 Tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403 ]
316010 Camp; cathelicidin antimicrobial peptide precursor [KO:K13916 ]
316794 Brcc3; lys-63-specific deubiquitinase BRCC36 [KO:K11864 ] [EC:3.4.19.-]
317546 Tab3; TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1 [KO:K12793 ]
360557 Nlrp1a; NACHT, LRR and PYD domains-containing protein 1a allele 1 [KO:K12798 ]
362245 Map1lc3a; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435 ]
363328 Ticam1; TIR domain-containing adapter molecule 1 [KO:K05842 ]
498658 Defa9; uncharacterized protein LOC498658 precursor [KO:K05230 ]
498659 RatNP-3b; neutrophil antibiotic peptide NP-3B precursor [KO:K05230 ]
498840 Sting1; stimulator of interferon genes protein [KO:K12654 ]
500133 Nod1; nucleotide-binding oligomerization domain-containing protein 1 [KO:K08727 ]
500491 Ifna16l1; interferon, alpha 16-like 1 precursor [KO:K05414 ]
502959 Ifna1l1; similar to put. precursor MuIFN-alpha 5 precursor [KO:K05414 ]
502961 Ifna4l2; similar to Interferon alpha-1 precursor [KO:K05414 ]
58974 Gabarap; gamma-aminobutyric acid receptor-associated protein [KO:K08341 ]
60371 Birc2; baculoviral IAP repeat-containing protein 2 [KO:K16060 ]
60383 Rbck1; ranBP-type and C3HC4-type zinc finger-containing protein 1 [KO:K10630 ] [EC:2.3.2.31 ]
613220 Defal1; defensin alpha-like protein 1 precursor [KO:K05230 ]
64171 Card9; caspase recruitment domain-containing protein 9 [KO:K12794 ]
64670 Gabarapl2; gamma-aminobutyric acid receptor-associated protein-like 2 [KO:K08341 ]
64862 Map1lc3b; microtubule-associated proteins 1A/1B light chain 3B [KO:K10435 ]
66021 Cybb; cytochrome b-245 beta chain [KO:K21421 ] [EC:1.-.-.-]
679906 Trpm7; transient receptor potential cation channel subfamily M member 7 [KO:K04982 ] [EC:2.7.11.1 ]
685116 Gbp3; LOW QUALITY PROTEIN: guanylate-binding protein 1-like [KO:K20899 ]
686323 Trip6; thyroid receptor-interacting protein 6 [KO:K12792 ]
686326 Ifnar2; interferon alpha and beta receptor subunit 2 isoform 1 precursor [KO:K05131 ]
689161 Gabarapl1; gamma-aminobutyric acid receptor-associated protein-like 1 [KO:K08341 ]
690894 Ifna1; interferon alpha family, gene 5 precursor [KO:K05414 ]
691998 Nlrp1b; NACHT, LRR and PYD domains-containing protein 1b allele 3-like [KO:K12798 ]
78971 Birc3; baculoviral IAP repeat-containing protein 3 [KO:K16060 ]
79462 Txn2; thioredoxin, mitochondrial precursor [KO:K03671 ]
81503 Cxcl1; growth-regulated alpha protein precursor [KO:K05505 ]
81678 Itpr2; inositol 1,4,5-trisphosphate receptor type 2 [KO:K04959 ]
81736 Nfkb1; nuclear factor NF-kappa-B p105 subunit isoform 2 [KO:K02580 ]
81780 Ccl5; C-C motif chemokine 5 precursor [KO:K12499 ]
83529 Vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
83531 Vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
83532 Vdac3; voltage-dependent anion-selective channel protein 3 [KO:K15041 ]
85240 Plcb2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 [KO:K05858 ] [EC:3.1.4.11 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Vandenabeele P, Bertrand MJ
Title
The role of the IAP E3 ubiquitin ligases in regulating pattern-recognition receptor signalling.
Journal
Reference
Authors
Strober W, Murray PJ, Kitani A, Watanabe T
Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
Journal
Reference
Authors
Estornes Y, Bertrand MJ
Title
IAPs, regulators of innate immunity and inflammation.
Journal
Reference
Authors
Jakopin Z
Title
Nucleotide-binding oligomerization domain (NOD) inhibitors: a rational approach toward inhibition of NOD signaling pathway.
Journal
Reference
Authors
Caruso R, Warner N, Inohara N, Nunez G
Title
NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Journal
Reference
Authors
Murray PJ
Title
Beyond peptidoglycan for Nod2.
Journal
Reference
Authors
Lecat A, Piette J, Legrand-Poels S
Title
The protein Nod2: an innate receptor more complex than previously assumed.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Converging roles of caspases in inflammasome activation, cell death and innate immunity.
Journal
Reference
Authors
Broz P, Dixit VM
Title
Inflammasomes: mechanism of assembly, regulation and signalling.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Regulation of inflammasome activation.
Journal
Reference
Authors
Jo EK, Kim JK, Shin DM, Sasakawa C
Title
Molecular mechanisms regulating NLRP3 inflammasome activation.
Journal
Reference
Authors
Broz P, Monack DM
Title
Newly described pattern recognition receptors team up against intracellular pathogens.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Fitzgerald KA
Title
Regulation of inflammasome signaling.
Journal
Reference
Authors
Sutterwala FS, Haasken S, Cassel SL
Title
Mechanism of NLRP3 inflammasome activation.
Journal
Reference
Authors
Latz E, Xiao TS, Stutz A
Title
Activation and regulation of the inflammasomes.
Journal
Reference
Authors
Blander JM
Title
A long-awaited merger of the pathways mediating host defence and programmed cell death.
Journal
Reference
Authors
von Moltke J, Ayres JS, Kofoed EM, Chavarria-Smith J, Vance RE
Title
Recognition of bacteria by inflammasomes.
Journal
Reference
Authors
Abais JM, Xia M, Zhang Y, Boini KM, Li PL
Title
Redox regulation of NLRP3 inflammasomes: ROS as trigger or effector?
Journal
Reference
Authors
Storek KM, Monack DM
Title
Bacterial recognition pathways that lead to inflammasome activation.
Journal
Reference
Authors
Hu H, Sun SC
Title
Ubiquitin signaling in immune responses.
Journal
Reference
Authors
Guo H, Callaway JB, Ting JP
Title
Inflammasomes: mechanism of action, role in disease, and therapeutics.
Journal
Reference
Authors
Man SM, Kanneganti TD
Title
Gasdermin D: the long-awaited executioner of pyroptosis.
Journal
Reference
Authors
Rathinam VA, Vanaja SK, Waggoner L, Sokolovska A, Becker C, Stuart LM, Leong JM, Fitzgerald KA
Title
TRIF licenses caspase-11-dependent NLRP3 inflammasome activation by gram-negative bacteria.
Journal
Reference
Authors
Kerur N, Veettil MV, Sharma-Walia N, Bottero V, Sadagopan S, Otageri P, Chandran B
Title
IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection.
Journal
Reference
Authors
Heilig R, Broz P
Title
Function and mechanism of the pyrin inflammasome.
Journal
Reference
Authors
Chakrabarti A, Banerjee S, Franchi L, Loo YM, Gale M Jr, Nunez G, Silverman RH
Title
RNase L activates the NLRP3 inflammasome during viral infections.
Journal
Related pathway
rno04620 Toll-like receptor signaling pathway
KO pathway