KEGG Orthology (KO) - Ciona intestinalis (yellow sea squirt)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:cin03030]
       100175037 ribonuclease H1-like isoform X1
       100175687 ribonuclease H1-like
       100182514 replication protein A 70 kDa DNA-binding subunit
       100184693 proliferating cell nuclear antigen-like
       100177218 DNA replication ATP-dependent helicase/nuclease DNA2
       100181411 flap endonuclease 1
       100181519 DNA ligase 1-like
       100184358 DNA polymerase alpha catalytic subunit
       100182528 DNA polymerase alpha subunit B-like
       100176054 DNA primase small subunit
       100181367 DNA primase large subunit
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100175840 DNA polymerase epsilon catalytic subunit A-like
       100180177 DNA polymerase epsilon subunit 2
       100169885 cbf-2; transcription factor CBF/NF-Y/archaeal histone -2
       100179904 DNA polymerase epsilon subunit 4-like
       100186333 DNA replication licensing factor mcm2
       108950147 DNA replication licensing factor MCM3-like
       100176589 DNA replication licensing factor MCM4
       100180633 DNA replication licensing factor mcm5-A-like
       100180106 DNA replication licensing factor MCM6-like isoform X1
       100179437 DNA replication licensing factor mcm7-B
       100184994 replication protein A 32 kDa subunit-A-like isoform X2
       113474468 replication protein A 14 kDa subunit-like
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100178254 ribonuclease H2 subunit A-like isoform X3
       100182593 ribonuclease H2 subunit B
       100178947 ribonuclease H2 subunit C-like
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K07466 RFA1; replication factor A1
K04802 PCNA; proliferating cell nuclear antigen
K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
K02321 POLA2; DNA polymerase alpha subunit B
K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
K02685 PRI2; DNA primase large subunit
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
K10744 RNASEH2B; ribonuclease H2 subunit B
K10745 RNASEH2C; ribonuclease H2 subunit C
     03410 Base excision repair [PATH:cin03410]
       100183214 N-glycosylase/DNA lyase-like
       100182948 endonuclease III-like protein 1
       100184071 uracil-DNA glycosylase
       100175942 single-strand selective monofunctional uracil DNA glycosylase
       100181164 LOW QUALITY PROTEIN: adenine DNA glycosylase-like
       100178994 uncharacterized protein LOC100178994 isoform X1
       104266612 G/T mismatch-specific thymine DNA glycosylase-like
       100176572 DNA-(apurinic or apyrimidinic site) lyase-like
       100182223 bifunctional polynucleotide phosphatase/kinase
       100175013 LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 1
       100177850 DNA polymerase beta-like
       100170069 zf(parp)-3; poly [ADP-ribose] polymerase 1 isoform X1
       100178364 poly [ADP-ribose] polymerase 2
       100175119 poly [ADP-ribose] polymerase 4
       100187117 poly(ADP-ribose) glycohydrolase
       100179757 poly(ADP-ribose) glycohydrolase ARH3-like
       445730 aptx; aprataxin
       100183893 DNA repair protein XRCC1-like
       100179190 DNA polymerase subunit gamma-1-like
       100170070 zf(parp)-2; DNA ligase 3
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100175840 DNA polymerase epsilon catalytic subunit A-like
       100180177 DNA polymerase epsilon subunit 2
       100169885 cbf-2; transcription factor CBF/NF-Y/archaeal histone -2
       100179904 DNA polymerase epsilon subunit 4-like
       100184693 proliferating cell nuclear antigen-like
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100181411 flap endonuclease 1
       100181519 DNA ligase 1-like
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K07759 PARG; poly(ADP-ribose) glycohydrolase [EC:3.2.1.143]
K11687 ADPRHL2; poly(ADP-ribose) glycohydrolase ARH3 [EC:3.2.1.143]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K10803 XRCC1; DNA-repair protein XRCC1
K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03420 Nucleotide excision repair [PATH:cin03420]
       100182516 RING-box protein 1
       100175879 cullin-4A isoform X1
       100187356 DNA damage-binding protein 1
       100177013 DNA repair protein complementing XP-C cells
       100179594 UV excision repair protein RAD23 homolog B-like
       100169886 ckn1; Cockayne syndrome 1 homolog
       100183213 DNA excision repair protein ERCC-6
       100177272 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
       100181952 DNA-directed RNA polymerase II subunit RPB2
       100177395 DNA-directed RNA polymerase II subunit RPB3-like
       113475769 DNA-directed RNA polymerase II subunit RPB3-like
       100182759 DNA-directed RNA polymerase II subunit RPB4
       100182874 DNA-directed RNA polymerases I, II, and III subunit RPABC1
       100181417 DNA-directed RNA polymerases I, II, and III subunit RPABC2
       100177778 DNA-directed RNA polymerase II subunit RPB7
       100178283 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
       101242260 DNA-directed RNA polymerases I, II, and III subunit RPABC4
       100181341 DNA-directed RNA polymerase II subunit RPB11-a isoform X2
       100182642 cyclin-dependent kinase 7
       100170063 zf(ring)-55; CDK-activating kinase assembly factor MAT1
       100177816 cyclin-H
       100183594 general transcription and DNA repair factor IIH helicase subunit XPB
       100177945 general transcription and DNA repair factor IIH helicase subunit XPD-like
       100176629 general transcription factor IIH subunit 1-like
       778950 zf(c2h2)-114; zinc finger protein
       100184165 general transcription factor IIH subunit 3-like
       100187369 general transcription factor IIH subunit 4
       100187391 DNA repair protein complementing XP-G cells-like isoform X1
       100179498 DNA repair protein complementing XP-A cells homolog
       100182514 replication protein A 70 kDa DNA-binding subunit
       100184994 replication protein A 32 kDa subunit-A-like isoform X2
       113474468 replication protein A 14 kDa subunit-like
       100176727 DNA repair endonuclease XPF
       101242850 DNA excision repair protein ERCC-1
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100175840 DNA polymerase epsilon catalytic subunit A-like
       100180177 DNA polymerase epsilon subunit 2
       100169885 cbf-2; transcription factor CBF/NF-Y/archaeal histone -2
       100179904 DNA polymerase epsilon subunit 4-like
       100184693 proliferating cell nuclear antigen-like
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100181519 DNA ligase 1-like
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K06634 CCNH; cyclin H
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10846 ERCC5; DNA excision repair protein ERCC-5
K10847 XPA; DNA-repair protein complementing XP-A cells
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10849 ERCC1; DNA excision repair protein ERCC-1
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03430 Mismatch repair [PATH:cin03430]
       100180400 mismatch repair endonuclease PMS2-like
       100182748 DNA mismatch repair protein Mlh1 isoform X1
       100185806 DNA mismatch repair protein Msh6
       100183267 DNA mismatch repair protein Msh2
       100175979 DNA mismatch repair protein Mlh3-like isoform X1
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100184693 proliferating cell nuclear antigen-like
       100183542 exonuclease 1
       100182514 replication protein A 70 kDa DNA-binding subunit
       100184994 replication protein A 32 kDa subunit-A-like isoform X2
       113474468 replication protein A 14 kDa subunit-like
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100181519 DNA ligase 1-like
K10858 PMS2; DNA mismatch repair protein PMS2
K08734 MLH1; DNA mismatch repair protein MLH1
K08737 MSH6; DNA mismatch repair protein MSH6
K08735 MSH2; DNA mismatch repair protein MSH2
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K04802 PCNA; proliferating cell nuclear antigen
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03440 Homologous recombination [PATH:cin03440]
     03450 Non-homologous end-joining [PATH:cin03450]
     03460 Fanconi anemia pathway [PATH:cin03460]
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:cin03000]
     03021 Transcription machinery [BR:cin03021]
     03019 Messenger RNA biogenesis [BR:cin03019]
     03041 Spliceosome [BR:cin03041]
     03011 Ribosome [BR:cin03011]
     03009 Ribosome biogenesis [BR:cin03009]
     03016 Transfer RNA biogenesis [BR:cin03016]
     03012 Translation factors [BR:cin03012]
     03110 Chaperones and folding catalysts [BR:cin03110]
     04131 Membrane trafficking [BR:cin04131]
     04121 Ubiquitin system [BR:cin04121]
     03051 Proteasome [BR:cin03051]
     03032 DNA replication proteins [BR:cin03032]
       100179807 origin recognition complex subunit 1-like
       100182471 origin recognition complex subunit 2-like
       100177877 origin recognition complex subunit 3
       100183401 origin recognition complex subunit 4
       100180237 origin recognition complex subunit 5
       100184078 DNA replication factor Cdt1 isoform X1
       100182084 cell division control protein 6 homolog
       100186333 DNA replication licensing factor mcm2
       108950147 DNA replication licensing factor MCM3-like
       100176589 DNA replication licensing factor MCM4
       100180633 DNA replication licensing factor mcm5-A-like
       100180106 DNA replication licensing factor MCM6-like isoform X1
       100179437 DNA replication licensing factor mcm7-B
       100176577 cyclin-A2
       100185796 G1/S-specific cyclin-E1 isoform X2
       100182544 cyclin-dependent kinase 2-like
       100179604 cell division cycle 7-related protein kinase-like
       100182896 DNA replication complex GINS protein PSF1
       100185409 DNA replication complex GINS protein PSF2-like
       100184087 DNA replication complex GINS protein SLD5
       100175589 ATP-dependent DNA helicase Q4
       445602 cdc45; cdc45 protein
       100179960 DNA helicase MCM8
       100175750 DNA helicase MCM9
       100180466 protein MCM10 homolog
       100178251 cyclin-dependent kinase 2-interacting protein-like
       100183629 mdm2-binding protein
       100178337 uncharacterized protein LOC100178337
       100184358 DNA polymerase alpha catalytic subunit
       100182528 DNA polymerase alpha subunit B-like
       100176054 DNA primase small subunit
       100181367 DNA primase large subunit
       100175840 DNA polymerase epsilon catalytic subunit A-like
       100180177 DNA polymerase epsilon subunit 2
       100169885 cbf-2; transcription factor CBF/NF-Y/archaeal histone -2
       100179904 DNA polymerase epsilon subunit 4-like
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100179190 DNA polymerase subunit gamma-1-like
       100182514 replication protein A 70 kDa DNA-binding subunit
       100184994 replication protein A 32 kDa subunit-A-like isoform X2
       113474468 replication protein A 14 kDa subunit-like
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100175037 ribonuclease H1-like isoform X1
       100175687 ribonuclease H1-like
       100178254 ribonuclease H2 subunit A-like isoform X3
       100182593 ribonuclease H2 subunit B
       100178947 ribonuclease H2 subunit C-like
       100184693 proliferating cell nuclear antigen-like
       100177218 DNA replication ATP-dependent helicase/nuclease DNA2
       100181411 flap endonuclease 1
       100183542 exonuclease 1
       100181519 DNA ligase 1-like
       100176493 uncharacterized protein LOC100176493
       100170066 zf(cxxc)-5; LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
       100176613 DNA (cytosine-5)-methyltransferase 3A-like isoform X2
       100179842 DNA (cytosine-5)-methyltransferase 3A-like
       100184902 geminin
       100184393 G2/mitotic-specific cyclin-B2-like
       100184160 G2/mitotic-specific cyclin-B3 isoform X2
       101243133 cyclin-dependent kinase 1-like
       100181958 uncharacterized protein LOC100181958
       100184172 uncharacterized protein LOC100184172 isoform X1
       100187094 uncharacterized protein LOC100187094 isoform X2
       100184868 telomerase-binding protein EST1A
       100186507 protein SMG5-like
       100187276 LOW QUALITY PROTEIN: telomerase reverse transcriptase-like
       100181249 telomerase protein component 1 isoform X1
       100181113 H/ACA ribonucleoprotein complex subunit 1-like
       100183111 H/ACA ribonucleoprotein complex subunit 2-like protein
       100183654 H/ACA ribonucleoprotein complex subunit DKC1
       100178781 small nuclear ribonucleoprotein-associated protein B-like
       100177388 small nuclear ribonucleoprotein Sm D1-like
       100181382 small nuclear ribonucleoprotein Sm D2-like
       100181057 small nuclear ribonucleoprotein Sm D3-like
       100177310 small nuclear ribonucleoprotein E-like
       100181243 small nuclear ribonucleoprotein F
       100175847 small nuclear ribonucleoprotein G
       100185652 double-strand break repair protein MRE11
       100182051 DNA repair protein RAD50
       100178467 nibrin isoform X2
       104266316 serine-protein kinase ATM-like isoform X3
       100179894 Werner syndrome ATP-dependent helicase homolog isoform X1
       100185020 DNA-dependent protein kinase catalytic subunit isoform X1
       108951125 DNA-dependent protein kinase catalytic subunit-like
       100176727 DNA repair endonuclease XPF
       100170069 zf(parp)-3; poly [ADP-ribose] polymerase 1 isoform X1
       100178364 poly [ADP-ribose] polymerase 2
       100175119 poly [ADP-ribose] polymerase 4
       100179282 tankyrase-1
       100184449 PIN2/TERF1-interacting telomerase inhibitor 1-like
       100183541 regulator of telomere elongation helicase 1
       100181893 telomere length regulation protein TEL2 homolog
       100178021 telomere-associated protein RIF1-like
       104266487 ATP-dependent DNA helicase PIF1-like
       778740 pur-alpha/beta/gamma; PUR-alpha/beta/gamma protein
       100179596 telomerase Cajal body protein 1 isoform X2
       100186066 replication stress response regulator SDE2-like
       100177899 protein RTF2 homolog
       100186905 LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial-like
       751087 ci-htf-1; transcription factor
       100179759 DNA topoisomerase 3-beta-1
       100170067 zf(cchc/grf)-1; DNA topoisomerase 3-alpha
K02603 ORC1; origin recognition complex subunit 1
K02604 ORC2; origin recognition complex subunit 2
K02605 ORC3; origin recognition complex subunit 3
K02606 ORC4; origin recognition complex subunit 4
K02607 ORC5; origin recognition complex subunit 5
K10727 CDT1; chromatin licensing and DNA replication factor 1
K02213 CDC6; cell division control protein 6
K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
K06627 CCNA; cyclin-A
K06626 CCNE; G1/S-specific cyclin-E1
K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22]
K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
K10732 GINS1; GINS complex subunit 1
K10733 GINS2; GINS complex subunit 2
K10735 GINS4; GINS complex subunit 4
K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
K06628 CDC45; cell division control protein 45
K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
K10736 MCM10; minichromosome maintenance protein 10
K26052 CINP; cyclin-dependent kinase 2-interacting protein
K26116 MTBP; Mdm2-binding protein
K26117 TICRR; Treslin
K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
K02321 POLA2; DNA polymerase alpha subunit B
K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
K02685 PRI2; DNA primase large subunit
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
K10744 RNASEH2B; ribonuclease H2 subunit B
K10745 RNASEH2C; ribonuclease H2 subunit C
K04802 PCNA; proliferating cell nuclear antigen
K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K26118 ATAD5; ATPase family AAA domain-containing protein 5
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
K10749 GMNN; geminin
K21770 CCNB2; G2/mitotic-specific cyclin-B2
K21771 CCNB3; G2/mitotic-specific cyclin-B3
K02087 CDK1; cyclin-dependent kinase 1 [EC:2.7.11.22 2.7.11.23]
K11109 POT1; protection of telomeres protein 1
K25749 TERB1; telomere repeats-binding bouquet formation protein 1
K23311 CTC1; CST complex subunit CTC1
K11124 SMG6; protein SMG6 [EC:3.1.-.-]
K11125 SMG5; protein SMG5
K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
K11127 TEP1; telomerase protein component 1
K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
K11086 SNRPB; small nuclear ribonucleoprotein B and B'
K11087 SNRPD1; small nuclear ribonucleoprotein D1
K11096 SNRPD2; small nuclear ribonucleoprotein D2
K11088 SNRPD3; small nuclear ribonucleoprotein D3
K11097 SNRPE; small nuclear ribonucleoprotein E
K11098 SNRPF; small nuclear ribonucleoprotein F
K11099 SNRPG; small nuclear ribonucleoprotein G
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10867 NBN; nibrin
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10799 TNKS; tankyrase [EC:2.4.2.30]
K11135 PINX1; Pin2-interacting protein X1
K11136 RTEL1; regulator of telomere elongation helicase 1 [EC:5.6.2.3]
K11137 TELO2; telomere length regulation protein
K11138 RIF1; telomere-associated protein RIF1
K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
K21772 PURA; transcriptional activator protein Pur-alpha
K23314 WRAP53; telomerase Cajal body protein 1
K25059 SDE2; replication stress response regulator SDE2
K25186 RTF2; replication termination factor 2
K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
     03036 Chromosome and associated proteins [BR:cin03036]
     03400 DNA repair and recombination proteins [BR:cin03400]
       100181190 methylated-DNA--protein-cysteine methyltransferase-like
       100187190 alpha-ketoglutarate-dependent dioxygenase alkB homolog 3
       100184080 activating signal cointegrator 1 complex subunit 3
       100184071 uracil-DNA glycosylase
       104266612 G/T mismatch-specific thymine DNA glycosylase-like
       100178994 uncharacterized protein LOC100178994 isoform X1
       100175942 single-strand selective monofunctional uracil DNA glycosylase
       100181164 LOW QUALITY PROTEIN: adenine DNA glycosylase-like
       100183214 N-glycosylase/DNA lyase-like
       100182948 endonuclease III-like protein 1
       100176572 DNA-(apurinic or apyrimidinic site) lyase-like
       100178968 DNA polymerase delta catalytic subunit isoform X2
       100180983 DNA polymerase delta subunit 2
       100175682 DNA polymerase delta subunit 3
       100180075 DNA polymerase delta subunit 4-like isoform X1
       100175840 DNA polymerase epsilon catalytic subunit A-like
       100180177 DNA polymerase epsilon subunit 2
       100169885 cbf-2; transcription factor CBF/NF-Y/archaeal histone -2
       100179904 DNA polymerase epsilon subunit 4-like
       100184693 proliferating cell nuclear antigen-like
       100181411 flap endonuclease 1
       100181519 DNA ligase 1-like
       100177850 DNA polymerase beta-like
       100183893 DNA repair protein XRCC1-like
       100170070 zf(parp)-2; DNA ligase 3
       100175013 LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 1
       445730 aptx; aprataxin
       100183681 aprataxin and PNK-like factor
       100182223 bifunctional polynucleotide phosphatase/kinase
       100170069 zf(parp)-3; poly [ADP-ribose] polymerase 1 isoform X1
       100178364 poly [ADP-ribose] polymerase 2
       100175119 poly [ADP-ribose] polymerase 4
       100177013 DNA repair protein complementing XP-C cells
       100179594 UV excision repair protein RAD23 homolog B-like
       100182516 RING-box protein 1
       100175879 cullin-4A isoform X1
       100187356 DNA damage-binding protein 1
       100177272 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
       100181952 DNA-directed RNA polymerase II subunit RPB2
       100177395 DNA-directed RNA polymerase II subunit RPB3-like
       113475769 DNA-directed RNA polymerase II subunit RPB3-like
       100182759 DNA-directed RNA polymerase II subunit RPB4
       100182874 DNA-directed RNA polymerases I, II, and III subunit RPABC1
       100181417 DNA-directed RNA polymerases I, II, and III subunit RPABC2
       100177778 DNA-directed RNA polymerase II subunit RPB7
       100178283 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
       100181341 DNA-directed RNA polymerase II subunit RPB11-a isoform X2
       101242260 DNA-directed RNA polymerases I, II, and III subunit RPABC4
       100169886 ckn1; Cockayne syndrome 1 homolog
       100183213 DNA excision repair protein ERCC-6
       100183594 general transcription and DNA repair factor IIH helicase subunit XPB
       100177945 general transcription and DNA repair factor IIH helicase subunit XPD-like
       100176629 general transcription factor IIH subunit 1-like
       778950 zf(c2h2)-114; zinc finger protein
       100184165 general transcription factor IIH subunit 3-like
       100187369 general transcription factor IIH subunit 4
       100182642 cyclin-dependent kinase 7
       100177816 cyclin-H
       100170063 zf(ring)-55; CDK-activating kinase assembly factor MAT1
       100182514 replication protein A 70 kDa DNA-binding subunit
       100184994 replication protein A 32 kDa subunit-A-like isoform X2
       113474468 replication protein A 14 kDa subunit-like
       100179498 DNA repair protein complementing XP-A cells homolog
       101242850 DNA excision repair protein ERCC-1
       100176727 DNA repair endonuclease XPF
       100187391 DNA repair protein complementing XP-G cells-like isoform X1
       100179544 MMS19 nucleotide excision repair protein homolog isoform X1
       100177000 cullin-3 isoform X2
       101241932 LOW QUALITY PROTEIN: cullin-5-like
       100177815 elongin-C-like
       100186014 elongin-B-like
       100182348 elongin-A3 member D isoform X2
       100183267 DNA mismatch repair protein Msh2
       100185806 DNA mismatch repair protein Msh6
       113474142 PMS1 protein homolog 1-like
       100182748 DNA mismatch repair protein Mlh1 isoform X1
       100180400 mismatch repair endonuclease PMS2-like
       100175979 DNA mismatch repair protein Mlh3-like isoform X1
       100183212 replication factor C subunit 1-like
       100181422 replication factor C subunit 2-like
       100181635 replication factor C subunit 4-like
       100184859 replication factor C subunit 3-like
       100179093 replication factor C subunit 5
       100183542 exonuclease 1
       100182230 WD repeat-containing protein 76
       100185652 double-strand break repair protein MRE11
       100182051 DNA repair protein RAD50
       100178467 nibrin isoform X2
       100181169 uncharacterized protein LOC100181169
       113474739 BRCA1-associated RING domain protein 1-like
       100176833 BRISC and BRCA1-A complex member 1 isoform X2
       104266459 BRISC and BRCA1-A complex member 2
       100178139 lys-63-specific deubiquitinase BRCC36
       100181276 Fanconi anemia group J protein homolog
       100186670 DNA endonuclease RBBP8
       100184442 DNA repair protein RAD51 homolog 1
       100186140 DNA repair protein RAD51 homolog 3-like isoform X1
       100181925 DNA repair protein RAD51 homolog 4-like
       101243045 DNA repair protein XRCC2-like
       100178294 DNA repair and recombination protein RAD54-like isoform X1
       100181238 helicase ARIP4
       100178626 ATP-dependent DNA helicase Q1
       100187076 ATP-dependent DNA helicase Q1-like isoform X1
       100179894 Werner syndrome ATP-dependent helicase homolog isoform X1
       100175589 ATP-dependent DNA helicase Q4
       100175500 ATP-dependent DNA helicase Q5
       100179759 DNA topoisomerase 3-beta-1
       100170067 zf(cchc/grf)-1; DNA topoisomerase 3-alpha
       100186989 recQ-mediated genome instability protein 1
       100178929 serine/threonine-protein phosphatase 4 catalytic subunit
       100179417 serine/threonine-protein phosphatase 4 regulatory subunit 2-A
       100186977 serine/threonine-protein phosphatase 4 regulatory subunit 3A
       100183088 serine/threonine-protein phosphatase 4 regulatory subunit 4-like isoform X1
       100181789 structural maintenance of chromosomes protein 5-like
       100175032 structural maintenance of chromosomes protein 6
       100179021 non-structural maintenance of chromosomes element 1 homolog
       100183116 E3 SUMO-protein ligase NSE2
       100181542 non-structural maintenance of chromosomes element 3 homolog isoform X1
       100178121 non-structural maintenance of chromosomes element 4 homolog A
       100183382 uncharacterized protein LOC100183382
       100180218 crossover junction endonuclease EME1
       100183800 exonuclease 3'-5' domain-containing protein 2-like isoform X1
       100180920 crossover junction endonuclease MUS81
       100179826 swi5-dependent recombination DNA repair protein 1 homolog
       100186194 uncharacterized protein LOC100186194 isoform X1
       100182716 flap endonuclease GEN homolog 1
       100175686 mortality factor 4-like protein 1
       100182311 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
       100184880 fidgetin-like protein 1
       100177741 uncharacterized protein LOC100177741 isoform X1
       101242794 protein FAM84B-like
       100185951 protein C21orf2 homolog isoform X3
       100184307 BRCA2-interacting transcriptional repressor EMSY isoform X1
       100175133 uncharacterized protein LOC100175133
       100180616 tonsoku-like protein
       100177452 X-ray repair cross-complementing protein 5
       100169921 zf(c2h2)-102; zinc finger protein ZF(C2H2)-102
       100185020 DNA-dependent protein kinase catalytic subunit isoform X1
       108951125 DNA-dependent protein kinase catalytic subunit-like
       100176197 DNA ligase 4 isoform X1
       101242866 DNA repair protein XRCC4-like
       100186607 DNA-directed DNA/RNA polymerase mu-like isoform X2
       100185732 protein artemis isoform X2
       100182543 uncharacterized protein LOC100182543
       100185596 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X3
       100187136 uncharacterized protein LOC100187136 isoform X1
       100175446 E3 ubiquitin-protein ligase FANCL
       778582 e(spl)/hairy-c; transcription factor protein
       778963 e(spl)/hairy-a; transcription factor protein
       100185873 uncharacterized protein LOC100185873 isoform X1
       100176962 ubiquitin-conjugating enzyme E2 T-like
       100184341 Fanconi anemia group D2 protein
       100187436 Fanconi anemia group I protein-like
       100175556 fanconi-associated nuclease 1-like
       108949293 fanconi-associated nuclease 1-like
       100181893 telomere length regulation protein TEL2 homolog
       100187510 WD repeat-containing protein 48
       100177460 serine/threonine-protein phosphatase 6 catalytic subunit
       100177844 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1
       778886 zf(ring)-23; zinc finger protein
       723795 ci-zf(zz)-8; E3 ubiquitin-protein ligase HERC2
       108950945 E3 ubiquitin-protein ligase HERC2-like isoform X2
       100179596 telomerase Cajal body protein 1 isoform X2
       104266554 zinc finger CW-type PWWP domain protein 1-like isoform X1
       100184824 WD repeat-containing protein 70
       100179427 DNA polymerase eta isoform X1
       100179616 DNA polymerase kappa-like
       100178366 DNA repair protein REV1-like isoform X1
       100183131 uncharacterized protein LOC100183131
       100175224 ubiquitin-conjugating enzyme E2 A
       100176652 ubiquitin-conjugating enzyme E2 variant 2-like
       100184240 ubiquitin-conjugating enzyme E2 35-like isoform X2
       100186584 sprT-like domain-containing protein Spartan
       100181834 uncharacterized protein LOC100181834
       100175771 cell cycle checkpoint control protein RAD9A
       100179869 checkpoint protein HUS1-like isoform X2
       100185026 cell cycle checkpoint protein RAD1-like
       100179734 cell cycle checkpoint protein RAD17
       100182717 protein timeless homolog
       100185057 TIMELESS-interacting protein
       100179558 claspin
       100185642 TELO2-interacting protein 1 homolog
       100186063 TELO2-interacting protein 2
       100175848 Golgi to ER traffic protein 4 homolog
       100177614 serine/threonine-protein kinase atr isoform X1
       100175364 uncharacterized protein LOC100175364
       104266316 serine-protein kinase ATM-like isoform X3
       100185343 serine/threonine-protein kinase Chk1
       100175326 myosin light chain kinase A
       100177918 M-phase inducer phosphatase 1 isoform X1
       104265444 14-3-3-like protein 2
       100177381 14-3-3 protein gamma-2-like
       104265378 14-3-3 protein gamma-like
       104265377 14-3-3-like protein 2
       100175088 14-3-3 protein epsilon-like
       445611 ci14-3-3; 14-3-3 protein
       100178649 neuron navigator 2
       100186458 wee1-like protein kinase 1-A
       100176949 mediator of DNA damage checkpoint protein 1-like
       100178269 RNA exonuclease 4-like
       100183083 serine/threonine-protein kinase PLK3
       100184532 serine/threonine-protein kinase Nek4
       104265466 serine/threonine-protein kinase Nek1-like
       100175797 serine/threonine-protein kinase Nek10
       100175739 serine/threonine-protein kinase Nek11-like
       100177723 protein downstream neighbor of son homolog
       100176140 KN motif and ankyrin repeat domain-containing protein 1-like isoform X1
       100180144 vacuolar protein sorting-associated protein 4B-like
       100170072 zf(fyve)-10; abscission/NoCut checkpoint regulator
       100186066 replication stress response regulator SDE2-like
       100179525 DNA polymerase theta
       100176373 myb-binding protein 1A-like protein
       100179553 DNA-directed primase/polymerase protein-like
       104266336 uncharacterized protein LOC104266336
       108949427 uncharacterized protein LOC108949427
       104265655 uncharacterized protein LOC104265655 isoform X1
       100181026 endonuclease V isoform X1
       100180637 helicase POLQ-like
       100176108 lutropin-choriogonadotropic hormone receptor
       108949967 pre-mRNA-processing factor 19-like
       100186894 cell division cycle 5-like protein
       100182504 pre-mRNA-splicing factor SPF27
       100183159 pleiotropic regulator 1
       100177483 7,8-dihydro-8-oxoguanine triphosphatase-like
       100183847 deoxyuridine 5'-triphosphate nucleotidohydrolase-like
       100183856 ribonucleoside-diphosphate reductase large subunit
       100175066 ribonucleoside-diphosphate reductase subunit M2 B isoform X1
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K10860 ALKBH3; mRNA N1-methyladenine demethylase [EC:1.14.11.54]
K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
K10803 XRCC1; DNA-repair protein XRCC1
K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K10612 CUL5; cullin 5
K03872 ELOC; elongin-C
K03873 ELOB; elongin-B
K15076 ELOA; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08737 MSH6; DNA mismatch repair protein MSH6
K10864 PMS1; DNA mismatch repair protein PMS1
K08734 MLH1; DNA mismatch repair protein MLH1
K10858 PMS2; DNA mismatch repair protein PMS2
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K24755 WDR76; WD repeat-containing protein 76
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10867 NBN; nibrin
K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
K10683 BARD1; BRCA1-associated RING domain protein 1
K20776 BABAM; BRISC and BRCA1-A complex member 1
K12173 BRE; BRCA1-A complex subunit BRE
K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-]
K04482 RAD51; DNA repair protein RAD51
K10870 RAD51L2; RAD51-like protein 2
K10871 RAD51L3; RAD51-like protein 3
K10879 XRCC2; DNA-repair protein XRCC2
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K10990 RMI1; RecQ-mediated genome instability protein 1
K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22823 NSMCE3; non-structural maintenance of chromosomes element 3
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K26126 SLF1; SMC5-SMC6 complex localization factor protein 1
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
K10484 BTBD12; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
K11339 MORF4L1; mortality factor 4-like protein 1
K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22806 SPIDR; DNA repair-scaffolding protein
K22810 FAM84B; protein FAM84B
K23456 CFAP410; cilla- and flagella-associated protein
K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
K26125 MMS22L; protein MMS22-like
K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10886 XRCC4; DNA-repair protein XRCC4
K03513 POLM; DNA polymerase mu [EC:2.7.7.7]
K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
K23386 PWWP3; PWWP domain-containing DNA repair factor 3
K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
K06054 HES1; hairy and enhancer of split 1
K06054 HES1; hairy and enhancer of split 1
K11511 APITD1; centromere protein S
K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
K10891 FANCD2; fanconi anemia group D2 protein
K10895 FANCI; fanconi anemia group I protein
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K11137 TELO2; telomere length regulation protein
K15361 WDR48; WD repeat-containing protein 48
K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
K23314 WRAP53; telomerase Cajal body protein 1
K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1
K24752 WDR70; WD repeat-containing protein 70
K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K24051 SPRTN; SprT-like domain-contaning protein Spartan
K26957 GCNA; germ cell nuclear acidic protein
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10903 HUS1; HUS1 checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
K25773 CLSPN; claspin
K20403 TTI1; TELO2-interacting protein 1
K23115 TTI2; TELO2-interacting protein 2
K23387 GET4; golgi to ER traffic protein 4
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
K10905 ATRIP; ATR interacting protein
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
K16198 YWHAG_H; 14-3-3 protein gamma/eta
K16198 YWHAG_H; 14-3-3 protein gamma/eta
K16198 YWHAG_H; 14-3-3 protein gamma/eta
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
K20780 MDC1; mediator of DNA damage checkpoint protein 1
K18340 AEN; apoptosis-enhancing nuclease [EC:3.1.-.-]
K08862 PLK3; polo-like kinase 3 [EC:2.7.11.21]
K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1]
K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
K22422 DONSON; protein downstream neighbor of Son
K22808 KANK; KN motif and ankyrin repeat domain-containing protein
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K24778 ZFYVE19; abscission/NoCut checkpoint regulator
K25059 SDE2; replication stress response regulator SDE2
K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
K21813 ENDOV; endonuclease V [EC:3.1.26.-]
K19178 HELQ; POLQ-like helicase [EC:5.6.2.4]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12861 BCAS2; pre-mRNA-splicing factor SPF27
K12862 PLRG1; pleiotropic regulator 1
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:cin03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: April 24, 2024