KEGG   PATHWAY: rsz03040
Entry
rsz03040                    Pathway                                
Name
Spliceosome - Raphanus sativus (radish)
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
rsz03040  Spliceosome
rsz03040

Other DBs
GO: 0005681
Organism
Raphanus sativus (radish) [GN:rsz]
Gene
130500456  U1 spliceosomal RNA [KO:K14276]
130495284  U1 spliceosomal RNA [KO:K14276]
130510349  U1 spliceosomal RNA [KO:K14276]
130497158  U1 spliceosomal RNA [KO:K14276]
130510221  U1 spliceosomal RNA [KO:K14276]
130512032  U1 spliceosomal RNA [KO:K14276]
130495306  U1 spliceosomal RNA [KO:K14276]
130512031  U1 spliceosomal RNA [KO:K14276]
130508919  U1 spliceosomal RNA [KO:K14276]
130497368  U2 spliceosomal RNA [KO:K14277]
130510290  U2 spliceosomal RNA [KO:K14277]
130512040  U2 spliceosomal RNA [KO:K14277]
130512042  U2 spliceosomal RNA [KO:K14277]
130500586  U4 spliceosomal RNA [KO:K14278]
130498272  U4 spliceosomal RNA [KO:K14278]
130512050  U4 spliceosomal RNA [KO:K14278]
130495396  U4 spliceosomal RNA [KO:K14278]
130499308  U4 spliceosomal RNA [KO:K14278]
130495404  U5 spliceosomal RNA [KO:K14279]
130498277  U6 spliceosomal RNA [KO:K14280]
130495413  U6 spliceosomal RNA [KO:K14280]
130497142  U6 spliceosomal RNA [KO:K14280]
130508924  U6 spliceosomal RNA [KO:K14280]
130510344  U6 spliceosomal RNA [KO:K14280]
108861936  DEAD-box ATP-dependent RNA helicase 42 [KO:K12811] [EC:5.6.2.7]
108847231  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
108841852  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
108817234  DEAD-box ATP-dependent RNA helicase 15-like [KO:K12812] [EC:5.6.2.7]
108817236  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
108863183  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [KO:K12813] [EC:5.6.2.6]
108842223  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 [KO:K12813] [EC:5.6.2.6]
108842439  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [KO:K12815] [EC:5.6.2.6]
108810111  uncharacterized protein LOC108810111 isoform X1 [KO:K12816]
108863257  uncharacterized protein LOC108863257 [KO:K12817]
108822617  uncharacterized protein LOC108822617 [KO:K12817]
130499168  uncharacterized protein LOC130499168 [KO:K12817]
108818815  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [KO:K12818] [EC:5.6.2.6]
108817123  ATP-dependent RNA helicase DEAH12, chloroplastic [KO:K12818] [EC:5.6.2.6]
108847026  ATP-dependent RNA helicase DEAH12, chloroplastic [KO:K12818] [EC:5.6.2.6]
108821944  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
108858526  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [KO:K12818] [EC:5.6.2.6]
108854300  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
108818996  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [KO:K12818] [EC:5.6.2.6]
108837411  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
130501613  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
130506538  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [KO:K12818] [EC:5.6.2.6]
108822046  pre-mRNA-splicing factor SLU7-A [KO:K12819]
108822047  pre-mRNA-splicing factor SLU7-A [KO:K12819]
108806877  pre-mRNA-splicing factor SLU7-like [KO:K12819]
108845810  LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-A [KO:K12819]
108818916  pre-mRNA-splicing factor SLU7-A-like [KO:K12819]
130505071  pre-mRNA-splicing factor SLU7-like [KO:K12819]
108862430  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [KO:K12820] [EC:5.6.2.6]
108851051  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
108860245  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
108815440  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 [KO:K12820] [EC:5.6.2.6]
108847518  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 isoform X1 [KO:K12820] [EC:5.6.2.6]
108860820  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
130510198  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 isoform X1 [KO:K12820] [EC:5.6.2.6]
130511975  uncharacterized protein LOC130511975 [KO:K11086]
108819102  uncharacterized protein LOC108819102 [KO:K11086]
108818305  uncharacterized protein LOC108818305 [KO:K11086]
108855840  uncharacterized protein LOC108855840 [KO:K11086]
108847028  small nuclear ribonucleoprotein SmD1b [KO:K11087]
108809034  small nuclear ribonucleoprotein SmD1a [KO:K11087]
108857594  small nuclear ribonucleoprotein SmD1a [KO:K11087]
130497084  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
108817121  uncharacterized protein LOC108817121 isoform X1 [KO:K11096]
108861208  uncharacterized protein LOC108861208 isoform X1 [KO:K11096]
108855653  uncharacterized protein LOC108855653 isoform X1 [KO:K11096]
130502204  uncharacterized protein LOC130502204 isoform X1 [KO:K11096]
108818911  small nuclear ribonucleoprotein SmD3b [KO:K11088]
108814661  small nuclear ribonucleoprotein SmD3b [KO:K11088]
108863147  small nuclear ribonucleoprotein SmD3b [KO:K11088]
108809337  uncharacterized protein LOC108809337 isoform X2 [KO:K11097]
108862220  uncharacterized protein LOC108862220 [KO:K11097]
108820749  probable small nuclear ribonucleoprotein F [KO:K11098]
108837975  probable small nuclear ribonucleoprotein F [KO:K11098]
108852389  probable small nuclear ribonucleoprotein F [KO:K11098]
108859285  probable small nuclear ribonucleoprotein G [KO:K11099]
108836646  probable small nuclear ribonucleoprotein G [KO:K11099]
108809241  probable small nuclear ribonucleoprotein G [KO:K11099]
108828069  U1 small nuclear ribonucleoprotein 70 kDa [KO:K11093]
108811619  LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
130507205  U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
108806432  U1 small nuclear ribonucleoprotein A [KO:K11091]
108846253  U1 small nuclear ribonucleoprotein C [KO:K11095]
108833981  U1 small nuclear ribonucleoprotein C-like [KO:K11095]
108828587  U1 small nuclear ribonucleoprotein C [KO:K11095]
108863610  pre-mRNA-processing protein 40B isoform X1 [KO:K12821]
108810186  pre-mRNA-processing protein 40A isoform X1 [KO:K12821]
108811685  RNA-binding motif protein 25 isoform X1 [KO:K12822]
130496852  RNA-binding motif protein 25 isoform X1 [KO:K12822]
108862406  DEAD-box ATP-dependent RNA helicase 40 [KO:K12823] [EC:5.6.2.7]
108862653  DEAD-box ATP-dependent RNA helicase 14 isoform X1 [KO:K12823] [EC:5.6.2.7]
108818844  DEAD-box ATP-dependent RNA helicase 20 [KO:K12823] [EC:5.6.2.7]
108812402  DEAD-box ATP-dependent RNA helicase 14 [KO:K12823] [EC:5.6.2.7]
108843294  DEAD-box ATP-dependent RNA helicase 46 isoform X1 [KO:K12823] [EC:5.6.2.7]
108828715  DEAD-box ATP-dependent RNA helicase 30 [KO:K12823] [EC:5.6.2.7]
130506145  DEAD-box ATP-dependent RNA helicase 20 [KO:K12823] [EC:5.6.2.7]
108859170  pre-mRNA-processing protein 40C [KO:K12824]
108827721  transcription initiation factor TFIID subunit 15b [KO:K13098]
108844947  transcription initiation factor TFIID subunit 15b [KO:K13098]
108844428  transcription initiation factor TFIID subunit 15b [KO:K13098]
130494460  transcription initiation factor TFIID subunit 15b-like [KO:K13098]
108821029  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
108830952  U2 small nuclear ribonucleoprotein A' [KO:K11092]
108805203  U2 small nuclear ribonucleoprotein A' [KO:K11092]
108815771  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
108847103  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
108813521  U2 small nuclear ribonucleoprotein B'' isoform X1 [KO:K11094]
130507913  U2 small nuclear ribonucleoprotein B''-like isoform X1 [KO:K11094]
108822291  probable splicing factor 3A subunit 1 [KO:K12825]
108807696  probable splicing factor 3A subunit 1 [KO:K12825]
108839623  uncharacterized protein LOC108839623 [KO:K12825]
108818458  probable splicing factor 3A subunit 1 [KO:K12825]
130494249  uncharacterized protein LOC130494249 [KO:K12825]
108839021  uncharacterized protein LOC108839021 [KO:K12825]
130494707  probable splicing factor 3A subunit 1 [KO:K12825]
108806608  uncharacterized protein LOC108806608 [KO:K12826]
108846219  splicing factor SF3a60 homolog isoform X1 [KO:K12827]
108818721  splicing factor SF3a60 homolog [KO:K12827]
108827433  uncharacterized protein LOC108827433 [KO:K12828]
108832938  uncharacterized protein LOC108832938 [KO:K12828]
108822330  uncharacterized protein LOC108822330 [KO:K12829]
108842825  uncharacterized protein LOC108842825 [KO:K12829]
108858548  uncharacterized protein LOC108858548 [KO:K12829]
108812434  spliceosome-associated protein 130 A-like [KO:K12830]
108812435  spliceosome-associated protein 130 A [KO:K12830]
108862363  pre-mRNA-splicing factor prp12 [KO:K12830]
130494449  pre-mRNA-splicing factor prp12-like [KO:K12830]
108823620  uncharacterized protein LOC108823620 [KO:K12831]
108823933  uncharacterized protein LOC108823933 [KO:K12831]
108806437  uncharacterized protein LOC108806437 [KO:K12831]
108851911  uncharacterized protein At4g14342 [KO:K12832]
108859873  uncharacterized protein At4g14342 [KO:K12832]
108845848  splicing factor 3B subunit 6-like protein [KO:K12833]
108817599  splicing factor 3B subunit 6-like protein [KO:K12833]
108851496  PHD finger-like domain-containing protein 5A [KO:K12834]
108852840  PHD finger-like domain-containing protein 5A [KO:K12834]
108845955  PHD finger-like domain-containing protein 5A [KO:K12834]
130502338  PHD finger-like domain-containing protein 5A [KO:K12834]
130509635  PHD finger-like domain-containing protein 5A [KO:K12834]
108813050  DEAD-box ATP-dependent RNA helicase 24 [KO:K12835] [EC:5.6.2.7]
108818809  splicing factor U2af small subunit A [KO:K12836]
108834699  splicing factor U2af small subunit B [KO:K12836]
108823445  splicing factor U2af large subunit B isoform X1 [KO:K12837]
108822918  splicing factor U2af large subunit A isoform X1 [KO:K12837]
108828454  splicing factor U2af large subunit A isoform X1 [KO:K12837]
108836582  splicing factor U2af large subunit A-like [KO:K12837]
108843286  splicing factor U2af large subunit A-like [KO:K12837]
108813428  LOW QUALITY PROTEIN: splicing factor U2af large subunit B [KO:K12837]
108848302  uncharacterized protein LOC108848302 [KO:K12839]
130494382  DNA-damage-repair/toleration protein DRT111, chloroplastic [KO:K12840]
108827586  protein RRC1 isoform X1 [KO:K12842]
130494254  protein RRC1 [KO:K12842]
108836541  sm-like protein LSM2 [KO:K12621]
108852382  sm-like protein LSM2 [KO:K12621]
130508177  sm-like protein LSM2 [KO:K12621]
130508189  sm-like protein LSM2 [KO:K12621]
108851932  sm-like protein LSM3A [KO:K12622]
108816053  sm-like protein LSM3B isoform X1 [KO:K12622]
108817593  sm-like protein LSM3B [KO:K12622]
108853466  sm-like protein LSM3B [KO:K12622]
108825841  sm-like protein LSM4 [KO:K12623]
108811303  sm-like protein LSM4 [KO:K12623]
108849640  sm-like protein LSM4 [KO:K12623]
108809309  sm-like protein LSM4 [KO:K12623]
108812691  sm-like protein LSM5 [KO:K12624]
130503235  sm-like protein LSM5 [KO:K12624]
108849344  sm-like protein LSM6A isoform X1 [KO:K12625]
108830514  sm-like protein LSM6A [KO:K12625]
108862051  sm-like protein LSM6A [KO:K12625]
108816648  sm-like protein LSM36B [KO:K12625]
108849155  sm-like protein LSM7 [KO:K12626]
108825711  sm-like protein LSM7 [KO:K12626]
108810377  sm-like protein LSM7 [KO:K12626]
108818094  sm-like protein LSM8 [KO:K12627]
108840035  sm-like protein LSM8 [KO:K12627]
108818882  protein RDM16 [KO:K12843]
108808330  protein RDM16 [KO:K12843]
130499150  protein RDM16-like [KO:K12843]
108836638  U4/U6 small nuclear ribonucleoprotein PRP4-like protein [KO:K12662]
108849140  U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1 [KO:K12662]
108849262  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
108811640  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
108813361  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
130502345  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
108850826  U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [KO:K12844]
108819941  uncharacterized protein LOC108819941 [KO:K12845]
108835190  uncharacterized protein LOC108835190 [KO:K12845]
108846640  uncharacterized protein LOC108846640 [KO:K12845]
108846641  uncharacterized protein LOC108846641 [KO:K12845]
108826478  uncharacterized protein LOC108826478 [KO:K12845]
108844648  uncharacterized protein LOC108844648 [KO:K12845]
108817792  LOW QUALITY PROTEIN: uncharacterized protein LOC108817792 [KO:K12846]
108822391  uncharacterized protein LOC108822391 [KO:K12847]
108848642  uncharacterized protein LOC108848642 [KO:K12847]
108823671  uncharacterized protein LOC108823671 [KO:K12847]
130511575  uncharacterized protein LOC130511575 [KO:K12847]
130511692  uncharacterized protein LOC130511692 [KO:K12847]
108817240  SART-1 family protein DOT2 [KO:K11984]
108860182  SART-1 family protein DOT2 [KO:K11984]
108859239  uncharacterized protein LOC108859239 isoform X2 [KO:K12848]
108843970  pre-mRNA-splicing factor 38 [KO:K12849]
108858634  pre-mRNA-splicing factor 38-like [KO:K12849]
108852323  pre-mRNA-splicing factor 38 [KO:K12849]
108854741  pre-mRNA splicing factor SR-like 1 [KO:K12850]
108820587  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
108861027  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
130496996  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
108811326  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
108842027  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
108860934  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
108861844  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
108838037  DExH-box ATP-dependent RNA helicase DExH12-like [KO:K12854] [EC:5.6.2.6]
108827519  protein STABILIZED1 [KO:K12855]
108812984  pre-mRNA-processing-splicing factor 8A-like [KO:K12856]
108841801  pre-mRNA-processing-splicing factor 8A [KO:K12856]
108854029  pre-mRNA-processing-splicing factor 8A [KO:K12856]
108812684  uncharacterized protein LOC108812684 [KO:K12857]
108846273  DEAD-box ATP-dependent RNA helicase 21-like [KO:K12858] [EC:5.6.2.7]
108805941  DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
108854765  DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
108847695  DEAD-box ATP-dependent RNA helicase 21-like [KO:K12858] [EC:5.6.2.7]
108844758  thioredoxin-like protein YLS8 [KO:K12859]
108817634  thioredoxin-like protein YLS8 [KO:K12859]
108820916  LOW QUALITY PROTEIN: pre-mRNA-processing factor 19 homolog 1-like [KO:K10599] [EC:2.3.2.27]
108855287  pre-mRNA-processing factor 19 homolog 2 [KO:K10599] [EC:2.3.2.27]
108805976  pre-mRNA-processing factor 19 homolog 2 [KO:K10599] [EC:2.3.2.27]
108847931  pre-mRNA-processing factor 19 homolog 1 [KO:K10599] [EC:2.3.2.27]
130504745  pre-mRNA-processing factor 19 homolog 1-like [KO:K10599] [EC:2.3.2.27]
130506934  pre-mRNA-processing factor 19 homolog 1-like [KO:K10599] [EC:2.3.2.27]
108822957  cell division cycle 5-like protein [KO:K12860]
108806724  cell division cycle 5-like protein [KO:K12860]
108806902  LOW QUALITY PROTEIN: cell division cycle 5-like protein [KO:K12860]
108830943  cell division cycle 5-like protein [KO:K12860]
108857699  pre-mRNA-splicing factor SPF27 homolog [KO:K12861]
108807058  pre-mRNA-splicing factor SPF27 homolog [KO:K12861]
130500635  pre-mRNA-splicing factor SPF27 homolog [KO:K12861]
108840574  protein pleiotropic regulatory locus 1-like [KO:K12862]
108855272  protein pleiotropic regulatory locus 1 [KO:K12862]
108857365  uncharacterized protein LOC108857365 [KO:K12863]
108857571  uncharacterized protein LOC108857571 isoform X1 [KO:K12863]
108806350  uncharacterized protein LOC108806350 [KO:K12863]
130503923  uncharacterized protein LOC130503923 [KO:K12863]
108813672  uncharacterized protein LOC108813672 [KO:K12864]
108854627  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
108857941  LOW QUALITY PROTEIN: heat shock 70 kDa protein 5 [KO:K03283]
108817316  heat shock 70 kDa protein 1 [KO:K03283]
108805214  heat shock 70 kDa protein 4 [KO:K03283]
108820571  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
108820572  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
108812096  heat shock 70 kDa protein 4 [KO:K03283]
108839487  heat shock 70 kDa protein 6, chloroplastic-like [KO:K03283]
108848284  heat shock 70 kDa protein 1-like [KO:K03283]
108862508  heat shock 70 kDa protein 1 [KO:K03283]
108812118  heat shock 70 kDa protein 1 [KO:K03283]
108817587  heat shock 70 kDa protein 1 [KO:K03283]
108837350  heat shock 70 kDa protein 1 [KO:K03283]
108822446  heat shock 70 kDa protein 1 [KO:K03283]
108823632  heat shock 70 kDa protein 1-like [KO:K03283]
108836689  heat shock 70 kDa protein 4 [KO:K03283]
108843358  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
108862141  heat shock 70 kDa protein 1 [KO:K03283]
108822520  heat shock 70 kDa protein 5 [KO:K03283]
108851190  heat shock 70 kDa protein 1-like [KO:K03283]
130496363  heat shock 70 kDa protein 4 [KO:K03283]
130504913  heat shock 70 kDa protein 5-like [KO:K03283]
108848682  uncharacterized protein LOC108848682 [KO:K12865]
108827603  SNW/SKI-interacting protein [KO:K06063]
108836228  uncharacterized protein LOC108836228 [KO:K12867]
108806079  uncharacterized protein LOC108806079 [KO:K12868]
108831762  uncharacterized protein LOC108831762 [KO:K12869]
108817978  uncharacterized protein LOC108817978 [KO:K12869]
130496024  uncharacterized protein LOC130496024 [KO:K12869]
108830840  uncharacterized protein LOC108830840 [KO:K12869]
108861698  uncharacterized protein LOC108861698 [KO:K12870]
108807233  peptidyl-prolyl cis-trans isomerase CYP18-2 [KO:K12733] [EC:5.2.1.8]
108848626  peptidyl-prolyl cis-trans isomerase CYP18-2 [KO:K12733] [EC:5.2.1.8]
108863376  uncharacterized protein LOC108863376 [KO:K12871]
108862706  uncharacterized protein LOC108862706 [KO:K12871]
108831768  LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 25-like [KO:K12872]
108822114  zinc finger CCCH domain-containing protein 4 [KO:K12872]
108819313  protein BUD31 homolog 2 [KO:K12873]
108851889  protein BUD31 homolog 1 [KO:K12873]
108841735  protein BUD31 homolog 1 [KO:K12873]
108812075  uncharacterized protein LOC108812075 [KO:K12874]
108822503  uncharacterized protein LOC108822503 [KO:K12875]
108863395  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
108847267  eukaryotic initiation factor 4A-III homolog isoform X1 [KO:K13025] [EC:5.6.2.7]
108862945  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
108860110  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
108819080  DEAD-box ATP-dependent RNA helicase 34 isoform X1 [KO:K13025] [EC:5.6.2.7]
108812034  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
130510156  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
130512332  eukaryotic initiation factor 4A-III homolog [KO:K13025] [EC:5.6.2.7]
108816425  RNA-binding protein Y14 [KO:K12876]
108820651  RNA-binding protein Y14 [KO:K12876]
108862997  RNA-binding protein Y14 [KO:K12876]
108841285  protein mago nashi homolog [KO:K12877]
108857435  protein mago nashi homolog [KO:K12877]
130495220  protein mago nashi homolog [KO:K12877]
108842538  THO complex subunit 1 isoform X1 [KO:K12878]
108822082  THO complex subunit 2 isoform X2 [KO:K12879]
108823681  THO complex subunit 3 [KO:K12880]
108833708  THO complex subunit 4A [KO:K12881]
108817760  THO complex subunit 4C isoform X1 [KO:K12881]
108817799  THO complex subunit 4B-like [KO:K12881]
108844227  THO complex subunit 4B [KO:K12881]
108854575  THO complex subunit 4D [KO:K12881]
108862057  nuclear cap-binding protein subunit 1 [KO:K12882]
108837090  nuclear cap-binding protein subunit 2 isoform X1 [KO:K12883]
108863554  UBP1-associated protein 2C [KO:K12741]
108863353  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
108820927  UBP1-associated protein 2C-like [KO:K12741]
108828274  glycine-rich RNA-binding protein 3, mitochondrial [KO:K12741]
108861526  heterogeneous nuclear ribonucleoprotein 1 [KO:K12741]
108854416  UBP1-associated protein 2B [KO:K12741]
108861621  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
108855490  uncharacterized protein LOC108855490 [KO:K12741]
108850472  UBP1-associated protein 2C-like [KO:K12741]
108859026  UBP1-associated protein 2A [KO:K12741]
108814388  glycine-rich RNA-binding protein 5, mitochondrial [KO:K12741]
108811827  heterogeneous nuclear ribonucleoprotein 1 [KO:K12741]
108829422  UBP1-associated protein 2A [KO:K12741]
108842454  glycine-rich RNA-binding protein 5, mitochondrial [KO:K12741]
130501417  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
130506798  UBP1-associated protein 2A-like [KO:K12741]
130507376  UBP1-associated protein 2C-like [KO:K12741]
108838490  serine/arginine-rich splicing factor SR30 isoform X1 [KO:K12890]
108859152  serine/arginine-rich splicing factor SR34A [KO:K12890]
108806208  serine/arginine-rich splicing factor SR34A isoform X1 [KO:K12890]
108843669  serine/arginine-rich splicing factor SR34A [KO:K12890]
108836117  serine/arginine-rich splicing factor SR30 isoform X1 [KO:K12890]
108828699  serine/arginine-rich-splicing factor SR34 [KO:K12890]
130501313  serine/arginine-rich splicing factor SR34A [KO:K12890]
130506120  serine/arginine-rich splicing factor SR34A [KO:K12890]
130494782  serine/arginine-rich splicing factor SR34A-like [KO:K12890]
108832934  serine/arginine-rich splicing factor SC35 [KO:K12891]
108847649  serine/arginine-rich splicing factor RS41 isoform X1 [KO:K12893]
108813187  serine/arginine-rich splicing factor RS31A isoform X1 [KO:K12893]
108822870  serine/arginine-rich splicing factor RS40 isoform X1 [KO:K12893]
108859667  LOW QUALITY PROTEIN: serine/arginine-rich splicing factor RS31 [KO:K12893]
130498958  serine/arginine-rich splicing factor RS40 [KO:K12893]
108863324  serine/arginine-rich splicing factor RS2Z32 isoform X1 [KO:K12896]
108818072  serine/arginine-rich splicing factor RS2Z32 isoform X2 [KO:K12896]
108843904  serine/arginine-rich splicing factor RS2Z33 isoform X1 [KO:K12896]
108853868  serine/arginine-rich splicing factor RSZ22 isoform X1 [KO:K12896]
108832112  serine/arginine-rich splicing factor RSZ22 [KO:K12896]
108810847  serine/arginine-rich splicing factor RSZ21 isoform X1 [KO:K12896]
108836064  serine/arginine-rich splicing factor RS2Z33 isoform X1 [KO:K12896]
108855639  serine/arginine-rich splicing factor RSZ22A [KO:K12896]
108806249  serine/arginine-rich splicing factor RSZ22A [KO:K12896]
108859230  serine/arginine-rich splicing factor RS2Z33 isoform X1 [KO:K12896]
108847963  serine/arginine-rich splicing factor RS2Z33-like [KO:K12896]
108840064  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
108819879  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
108813148  serine/arginine-rich splicing factor SR45a [KO:K12897]
108822032  serine/arginine-rich splicing factor SR45a [KO:K12897]
108834497  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
108834501  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
108842431  LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45a [KO:K12897]
108857126  serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [KO:K12900]
108806084  serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [KO:K12900]
108848349  serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
108808641  serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [KO:K12900]
108820456  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
130494347  serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [KO:K12900]
130503632  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
Reference
PMID:19239890
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
PMID:10978320
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
PMID:17537823
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
PMID:19733268
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   
LinkDB

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