KEGG   PATHWAY: ghi03040
Entry
ghi03040                    Pathway                                
Name
Spliceosome - Gossypium hirsutum (upland cotton)
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
ghi03040  Spliceosome
ghi03040

Other DBs
GO: 0005681
Organism
Gossypium hirsutum (upland cotton) [GN:ghi]
Gene
121223847  U1 spliceosomal RNA [KO:K14276]
121213104  U1 spliceosomal RNA [KO:K14276]
121212764  U1 spliceosomal RNA [KO:K14276]
121216686  U1 spliceosomal RNA [KO:K14276]
121222651  U1 spliceosomal RNA [KO:K14276]
121222790  U1 spliceosomal RNA [KO:K14276]
121221399  U1 spliceosomal RNA [KO:K14276]
121209264  U1 spliceosomal RNA [KO:K14276]
121207233  U1 spliceosomal RNA [KO:K14276]
121204191  U2 spliceosomal RNA [KO:K14277]
121210451  U2 spliceosomal RNA [KO:K14277]
121215000  U2 spliceosomal RNA [KO:K14277]
107905114  U2 spliceosomal RNA [KO:K14277]
121223869  U2 spliceosomal RNA [KO:K14277]
121222846  U2 spliceosomal RNA [KO:K14277]
121219766  U2 spliceosomal RNA [KO:K14277]
121213216  U2 spliceosomal RNA [KO:K14277]
121214944  U2 spliceosomal RNA [KO:K14277]
121218760  U4 spliceosomal RNA [KO:K14278]
121231087  U4 spliceosomal RNA [KO:K14278]
121207240  U4 spliceosomal RNA [KO:K14278]
121229831  U4 spliceosomal RNA [KO:K14278]
121207239  U4 spliceosomal RNA [KO:K14278]
121212820  U4 spliceosomal RNA [KO:K14278]
121218103  U4 spliceosomal RNA [KO:K14278]
121228543  U4 spliceosomal RNA [KO:K14278]
121222658  U4 spliceosomal RNA [KO:K14278]
121215686  U5 spliceosomal RNA [KO:K14279]
121208909  U5 spliceosomal RNA [KO:K14279]
121223968  U5 spliceosomal RNA [KO:K14279]
121215708  U5 spliceosomal RNA [KO:K14279]
121209035  U6 spliceosomal RNA [KO:K14280]
121231198  U6 spliceosomal RNA [KO:K14280]
121222682  U6 spliceosomal RNA [KO:K14280]
107934396  DEAD-box ATP-dependent RNA helicase 42 [KO:K12811] [EC:5.6.2.7]
107942493  DEAD-box ATP-dependent RNA helicase 42 [KO:K12811] [EC:5.6.2.7]
107893444  DEAD-box ATP-dependent RNA helicase 15-like [KO:K12812] [EC:5.6.2.7]
107897262  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107940048  DEAD-box ATP-dependent RNA helicase 15-like isoform X1 [KO:K12812] [EC:5.6.2.7]
107962898  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107948699  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107888417  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107906884  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107958960  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107914165  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
107901605  DEAD-box ATP-dependent RNA helicase 15 isoform X1 [KO:K12812] [EC:5.6.2.7]
107951242  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [KO:K12813] [EC:5.6.2.6]
107933374  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like isoform X2 [KO:K12813] [EC:5.6.2.6]
107943914  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like [KO:K12813] [EC:5.6.2.6]
107962088  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform X1 [KO:K12815] [EC:5.6.2.6]
121202928  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like isoform X1 [KO:K12815] [EC:5.6.2.6]
107954761  pre-mRNA-processing factor 17 isoform X1 [KO:K12816]
107907372  pre-mRNA-processing factor 17 isoform X1 [KO:K12816]
107907517  pre-mRNA-processing factor 17 isoform X3 [KO:K12816]
107955291  pre-mRNA-processing factor 17-like isoform X1 [KO:K12816]
107951791  pre-mRNA-splicing factor 18 [KO:K12817]
107936504  pre-mRNA-splicing factor 18 [KO:K12817]
107914671  pre-mRNA-splicing factor 18 [KO:K12817]
121219915  pre-mRNA-splicing factor 18-like [KO:K12817]
107930383  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
107906342  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
107958508  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
107886452  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [KO:K12818] [EC:5.6.2.6]
107909825  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X2 [KO:K12818] [EC:5.6.2.6]
107925053  LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
107946367  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [KO:K12818] [EC:5.6.2.6]
107934771  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
107914369  ATP-dependent RNA helicase DEAH11, chloroplastic [KO:K12818] [EC:5.6.2.6]
107950424  ATP-dependent RNA helicase DEAH11, chloroplastic-like [KO:K12818] [EC:5.6.2.6]
121208253  ATP-dependent RNA helicase DEAH11, chloroplastic-like [KO:K12818] [EC:5.6.2.6]
107914928  pre-mRNA-splicing factor SLU7 [KO:K12819]
107936255  pre-mRNA-splicing factor SLU7 [KO:K12819]
107960470  pre-mRNA-splicing factor SLU7-like [KO:K12819]
121214909  pre-mRNA-splicing factor SLU7 [KO:K12819]
107951302  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [KO:K12820] [EC:5.6.2.6]
107946014  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [KO:K12820] [EC:5.6.2.6]
107930376  small nuclear ribonucleoprotein-associated proteins B and B'-like [KO:K11086]
107936887  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107912426  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107934364  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107923020  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107923072  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107912482  small nuclear ribonucleoprotein SmD1a [KO:K11087]
107949107  small nuclear ribonucleoprotein SmD1a [KO:K11087]
121220267  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
121204665  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
121210798  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
107903911  small nuclear ribonucleoprotein Sm D2 [KO:K11096]
107957208  small nuclear ribonucleoprotein Sm D2-like [KO:K11096]
107913510  small nuclear ribonucleoprotein Sm D2 [KO:K11096]
107918638  small nuclear ribonucleoprotein Sm D2 [KO:K11096]
107910684  small nuclear ribonucleoprotein SmD3b [KO:K11088]
107902677  small nuclear ribonucleoprotein SmD3a-like [KO:K11088]
107962870  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
107905728  small nuclear ribonucleoprotein SmD3b-like isoform X1 [KO:K11088]
107922261  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
121213876  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
107928261  small nuclear ribonucleoprotein E [KO:K11097]
107909182  small nuclear ribonucleoprotein E [KO:K11097]
107907486  probable small nuclear ribonucleoprotein F [KO:K11098]
107942735  probable small nuclear ribonucleoprotein F [KO:K11098]
107928220  probable small nuclear ribonucleoprotein G [KO:K11099]
107908690  probable small nuclear ribonucleoprotein G [KO:K11099]
107925553  probable small nuclear ribonucleoprotein G [KO:K11099]
107896350  probable small nuclear ribonucleoprotein G [KO:K11099]
107899248  probable small nuclear ribonucleoprotein G [KO:K11099]
107948421  probable small nuclear ribonucleoprotein G [KO:K11099]
107914294  U1 small nuclear ribonucleoprotein 70 kDa [KO:K11093]
107900632  U1 small nuclear ribonucleoprotein 70 kDa [KO:K11093]
107926893  U1 small nuclear ribonucleoprotein A [KO:K11091]
107946067  U1 small nuclear ribonucleoprotein A [KO:K11091]
107925675  U1 small nuclear ribonucleoprotein A [KO:K11091]
107913725  U1 small nuclear ribonucleoprotein A [KO:K11091]
107949854  U1 small nuclear ribonucleoprotein C [KO:K11095]
107953202  U1 small nuclear ribonucleoprotein C [KO:K11095]
107912393  U1 small nuclear ribonucleoprotein C [KO:K11095]
107924596  U1 small nuclear ribonucleoprotein C [KO:K11095]
107938320  pre-mRNA-processing protein 40A isoform X1 [KO:K12821]
107945158  pre-mRNA-processing protein 40A [KO:K12821]
107898754  pre-mRNA-processing protein 40A-like isoform X1 [KO:K12821]
107930594  pre-mRNA-processing protein 40A isoform X1 [KO:K12821]
107909631  RNA-binding protein 25 isoform X1 [KO:K12822]
107886664  RNA-binding protein 25 isoform X1 [KO:K12822]
107888678  DEAD-box ATP-dependent RNA helicase 14 [KO:K12823] [EC:5.6.2.7]
107916365  DEAD-box ATP-dependent RNA helicase 20 [KO:K12823] [EC:5.6.2.7]
107892276  DEAD-box ATP-dependent RNA helicase 14 isoform X1 [KO:K12823] [EC:5.6.2.7]
107897390  DEAD-box ATP-dependent RNA helicase 20 isoform X1 [KO:K12823] [EC:5.6.2.7]
107943288  DEAD-box ATP-dependent RNA helicase 20 [KO:K12823] [EC:5.6.2.7]
107926050  DEAD-box ATP-dependent RNA helicase 46 [KO:K12823] [EC:5.6.2.7]
107912045  DEAD-box ATP-dependent RNA helicase 20 [KO:K12823] [EC:5.6.2.7]
107924201  DEAD-box ATP-dependent RNA helicase 20-like [KO:K12823] [EC:5.6.2.7]
107951608  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
107910540  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
107926488  DEAD-box ATP-dependent RNA helicase 46 isoform X1 [KO:K12823] [EC:5.6.2.7]
121219595  DEAD-box ATP-dependent RNA helicase 46-like isoform X1 [KO:K12823] [EC:5.6.2.7]
107906108  DEAD-box ATP-dependent RNA helicase 20-like [KO:K12823] [EC:5.6.2.7]
107959861  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
107922278  pre-mRNA-processing protein 40C isoform X1 [KO:K12824]
107918211  pre-mRNA-processing protein 40C isoform X1 [KO:K12824]
107927097  transcription initiation factor TFIID subunit 15b [KO:K13098]
107927098  transcription initiation factor TFIID subunit 15b-like [KO:K13098]
107906289  transcription initiation factor TFIID subunit 15b-like isoform X1 [KO:K13098]
107963856  transcription initiation factor TFIID subunit 15b [KO:K13098]
107963857  transcription initiation factor TFIID subunit 15b [KO:K13098]
107914486  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
107896860  U2 small nuclear ribonucleoprotein A' [KO:K11092]
107927120  U2 small nuclear ribonucleoprotein B'' 2 [KO:K11094]
107935079  U2 small nuclear ribonucleoprotein B'' 2 [KO:K11094]
107910675  probable splicing factor 3A subunit 1 [KO:K12825]
107909985  probable splicing factor 3A subunit 1 [KO:K12825]
107907325  splicing factor 3A subunit 2-like [KO:K12826]
107908741  splicing factor 3A subunit 2 [KO:K12826]
107930276  splicing factor SF3a60 homolog isoform X1 [KO:K12827]
107891758  splicing factor SF3a60 homolog [KO:K12827]
107890768  splicing factor SF3a60 homolog [KO:K12827]
107913690  splicing factor SF3a60 homolog isoform X1 [KO:K12827]
107929397  splicing factor 3B subunit 1 [KO:K12828]
107929017  splicing factor 3B subunit 1 [KO:K12828]
107901670  splicing factor 3B subunit 2 [KO:K12829]
107962985  splicing factor 3B subunit 2 [KO:K12829]
107930724  spliceosome-associated protein 130 A [KO:K12830]
107959892  spliceosome-associated protein 130 A [KO:K12830]
107889475  splicing factor 3B subunit 3-like isoform X1 [KO:K12830]
107891227  splicing factor 3B subunit 3 isoform X1 [KO:K12830]
107926073  LOW QUALITY PROTEIN: spliceosome-associated protein 130 A [KO:K12830]
107897773  spliceosome-associated protein 130 A [KO:K12830]
107914295  splicing factor 3B subunit 4-like [KO:K12831]
107900636  LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [KO:K12831]
107959793  RNA-binding protein 7 [KO:K12831]
121216283  RNA-binding protein 7-like [KO:K12831]
107941154  uncharacterized protein At4g14342 [KO:K12832]
107906329  uncharacterized protein At4g14342 [KO:K12832]
107939473  splicing factor 3B subunit 6-like protein [KO:K12833]
107945084  splicing factor 3B subunit 6-like protein [KO:K12833]
107953016  PHD finger-like domain-containing protein 5A [KO:K12834]
107959035  PHD finger-like domain-containing protein 5A [KO:K12834]
107906216  PHD finger-like domain-containing protein 5A [KO:K12834]
107891610  PHD finger-like domain-containing protein 5A [KO:K12834]
107889069  PHD finger-like domain-containing protein 5A [KO:K12834]
121212672  PHD finger-like domain-containing protein 5A [KO:K12834]
121212673  PHD finger-like domain-containing protein 5A [KO:K12834]
107917092  DEAD-box ATP-dependent RNA helicase 24 [KO:K12835] [EC:5.6.2.7]
107917120  DEAD-box ATP-dependent RNA helicase 24 [KO:K12835] [EC:5.6.2.7]
107949504  DEAD-box ATP-dependent RNA helicase 24-like [KO:K12835] [EC:5.6.2.7]
107949521  DEAD-box ATP-dependent RNA helicase 24 isoform X1 [KO:K12835] [EC:5.6.2.7]
107936496  splicing factor U2af small subunit B-like [KO:K12836]
107951030  splicing factor U2af small subunit B-like [KO:K12836]
107912780  splicing factor U2af small subunit B [KO:K12836]
107891645  splicing factor U2af small subunit B [KO:K12836]
107940226  splicing factor U2af small subunit B-like [KO:K12836]
107914941  uncharacterized protein LOC107914941 [KO:K12837]
107957409  splicing factor U2af large subunit B isoform X2 [KO:K12837]
107904217  splicing factor U2af large subunit B isoform X1 [KO:K12837]
107904274  splicing factor U2af large subunit B isoform X1 [KO:K12837]
107897745  uncharacterized protein LOC107897745 [KO:K12837]
107945661  splicing factor U2af large subunit B isoform X1 [KO:K12837]
121216209  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
107926667  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
107902055  survival of motor neuron-related-splicing factor 30 isoform X1 [KO:K12839]
107962291  survival of motor neuron-related-splicing factor 30 isoform X1 [KO:K12839]
107925275  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
107930433  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
107940059  protein RRC1-like isoform X1 [KO:K12842]
107961709  protein RRC1 isoform X2 [KO:K12842]
107901654  protein RRC1 isoform X1 [KO:K12842]
107948689  protein RRC1 isoform X1 [KO:K12842]
107949227  sm-like protein LSM2 [KO:K12621]
121204966  sm-like protein LSM2 [KO:K12621]
107914111  sm-like protein LSM3B [KO:K12622]
107932177  sm-like protein LSM3A [KO:K12622]
107950784  sm-like protein LSM3A [KO:K12622]
121217861  sm-like protein LSM3B [KO:K12622]
107946085  sm-like protein LSM4 [KO:K12623]
107949669  sm-like protein LSM4 isoform X1 [KO:K12623]
107931236  probable U6 snRNA-associated Sm-like protein LSm4 [KO:K12623]
107917334  sm-like protein LSM4 [KO:K12623]
107912591  sm-like protein LSM5 [KO:K12624]
107955231  sm-like protein LSM5 [KO:K12624]
107954920  sm-like protein LSM5 [KO:K12624]
107923065  sm-like protein LSM5 [KO:K12624]
107927439  sm-like protein LSM36B [KO:K12625]
107903391  sm-like protein LSM36B [KO:K12625]
107928430  sm-like protein LSM36B [KO:K12625]
121206315  sm-like protein LSM36B [KO:K12625]
107918492  sm-like protein LSM7 [KO:K12626]
107926248  sm-like protein LSM7 [KO:K12626]
107938625  sm-like protein LSM8 [KO:K12627]
107916624  sm-like protein LSM8 [KO:K12627]
107942751  sm-like protein LSM8 [KO:K12627]
107939866  sm-like protein LSM8 [KO:K12627]
107930725  protein RDM16-like isoform X1 [KO:K12843]
107891161  protein RDM16 isoform X1 [KO:K12843]
107941564  protein RDM16 isoform X1 [KO:K12843]
107929465  U4/U6 small nuclear ribonucleoprotein PRP4-like protein [KO:K12662]
107929129  U4/U6 small nuclear ribonucleoprotein PRP4-like protein [KO:K12662]
107927521  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
107915167  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
107896379  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
107896382  peptidyl-prolyl cis-trans isomerase CYP22-like [KO:K09567] [EC:5.2.1.8]
107897020  peptidyl-prolyl cis-trans isomerase CYP22 [KO:K09567] [EC:5.2.1.8]
121207611  peptidyl-prolyl cis-trans isomerase CYP22-like [KO:K09567] [EC:5.2.1.8]
107909635  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
121203024  U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [KO:K12844]
107901289  NHP2-like protein 1 [KO:K12845]
107962625  NHP2-like protein 1 [KO:K12845]
107909217  NHP2-like protein 1 [KO:K12845]
121219998  NHP2-like protein 1 [KO:K12845]
107926996  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [KO:K12846]
107941638  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [KO:K12846]
107961935  U4/U6.U5 tri-snRNP-associated protein 2 isoform X1 [KO:K12847]
107963714  U4/U6.U5 tri-snRNP-associated protein 2 isoform X1 [KO:K12847]
107910074  U4/U6.U5 tri-snRNP-associated protein 2 isoform X1 [KO:K12847]
107960167  U4/U6.U5 tri-snRNP-associated protein 2 [KO:K12847]
107904018  SART-1 family protein DOT2 [KO:K11984]
121216779  SART-1 family protein DOT2-like [KO:K11984]
107893941  zinc finger matrin-type protein 2 [KO:K12848]
107933814  zinc finger matrin-type protein 2 [KO:K12848]
107914482  pre-mRNA-splicing factor 38 [KO:K12849]
107896863  pre-mRNA-splicing factor 38 [KO:K12849]
107950451  pre-mRNA splicing factor SR-like 1 isoform X1 [KO:K12850]
107915621  pre-mRNA splicing factor SR-like 1 isoform X1 [KO:K12850]
107938433  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
107941271  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
107891521  110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
107889174  LOW QUALITY PROTEIN: 110 kDa U5 small nuclear ribonucleoprotein component CLO [KO:K12852]
107896364  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
107915277  DExH-box ATP-dependent RNA helicase DExH12 [KO:K12854] [EC:5.6.2.6]
107886763  protein STABILIZED1 isoform X1 [KO:K12855]
107909304  protein STABILIZED1 [KO:K12855]
107914156  pre-mRNA-processing-splicing factor 8A-like [KO:K12856]
107897276  pre-mRNA-processing-splicing factor 8A [KO:K12856]
107896773  U5 small nuclear ribonucleoprotein 40 kDa protein [KO:K12857]
107914597  U5 small nuclear ribonucleoprotein 40 kDa protein-like [KO:K12857]
107934847  DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
107927452  LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
107903793  DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
107914725  DEAD-box ATP-dependent RNA helicase 21 [KO:K12858] [EC:5.6.2.7]
107944993  thioredoxin-like protein YLS8 [KO:K12859]
107944944  thioredoxin-like protein YLS8 [KO:K12859]
107928829  thioredoxin-like protein YLS8 isoform X1 [KO:K12859]
107920775  mitosis protein dim1 [KO:K12859]
107930406  pre-mRNA-processing factor 19 homolog 1 [KO:K10599] [EC:2.3.2.27]
107936145  pre-mRNA-processing factor 19 homolog 1 [KO:K10599] [EC:2.3.2.27]
107932162  pre-mRNA-processing factor 19-like [KO:K10599] [EC:2.3.2.27]
107940133  pre-mRNA-processing factor 19 [KO:K10599] [EC:2.3.2.27]
107929143  pre-mRNA-processing factor 19 homolog 1 isoform X1 [KO:K10599] [EC:2.3.2.27]
107926813  cell division cycle 5-like protein [KO:K12860]
107889597  LOW QUALITY PROTEIN: cell division cycle 5-like protein [KO:K12860]
107893193  cell division cycle 5-like protein [KO:K12860]
107936763  cell division cycle 5-like protein [KO:K12860]
107902058  pre-mRNA-splicing factor SPF27 homolog isoform X1 [KO:K12861]
107962288  pre-mRNA-splicing factor SPF27 homolog isoform X1 [KO:K12861]
107912450  protein pleiotropic regulatory locus 1 [KO:K12862]
107933242  protein pleiotropic regulatory locus 1 [KO:K12862]
107918266  protein CWC15 homolog A [KO:K12863]
107893513  protein CWC15 homolog A [KO:K12863]
107945246  beta-catenin-like protein 1 [KO:K12864]
107935650  beta-catenin-like protein 1 isoform X2 [KO:K12864]
107914594  stromal 70 kDa heat shock-related protein, chloroplastic [KO:K03283]
107889698  heat shock cognate 70 kDa protein [KO:K03283]
107957666  heat shock 70 kDa protein [KO:K03283]
107906541  heat shock cognate 70 kDa protein 2 [KO:K03283]
107903288  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
107896771  stromal 70 kDa heat shock-related protein, chloroplastic [KO:K03283]
107959100  heat shock cognate 70 kDa protein 2 [KO:K03283]
107958018  heat shock cognate 70 kDa protein 2 [KO:K03283]
107897828  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107891043  heat shock cognate 70 kDa protein [KO:K03283]
107928501  heat shock 70 kDa protein 6, chloroplastic-like [KO:K03283]
107927450  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
107939927  LOW QUALITY PROTEIN: heat shock cognate 70 kDa protein 2 [KO:K03283]
107900472  probable mediator of RNA polymerase II transcription subunit 37c [KO:K03283]
107950250  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107885944  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107943622  heat shock 70 kDa protein 6, chloroplastic [KO:K03283]
107898826  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107938185  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107920169  heat shock 70 kDa protein-like [KO:K03283]
107936049  heat shock 70 kDa protein [KO:K03283]
107923479  heat shock cognate 70 kDa protein-like [KO:K03283]
121218583  heat shock 70 kDa protein 4-like [KO:K03283]
121223577  heat shock cognate 70 kDa protein 2-like [KO:K03283]
107925934  uncharacterized protein LOC107925934 [KO:K12865]
121209481  uncharacterized protein LOC121209481 isoform X1 [KO:K12865]
107899967  SNW/SKI-interacting protein A-like [KO:K06063]
107962732  SNW/SKI-interacting protein A [KO:K06063]
107924019  pre-mRNA-splicing factor SYF1 [KO:K12867]
107913998  pre-mRNA-splicing factor SYF1 [KO:K12867]
107947183  pre-mRNA-splicing factor syf2 [KO:K12868]
107898558  pre-mRNA-splicing factor syf2 [KO:K12868]
107920904  pre-mRNA-splicing factor syf2-like [KO:K12868]
107949108  pre-mRNA-splicing factor syf2 [KO:K12868]
107904473  crooked neck-like protein 1 [KO:K12869]
107924173  crooked neck-like protein 1 [KO:K12869]
107950582  pre-mRNA-splicing factor ISY1 homolog [KO:K12870]
107886001  pre-mRNA-splicing factor ISY1 homolog [KO:K12870]
107924917  pre-mRNA-splicing factor ISY1 homolog [KO:K12870]
107925545  peptidyl-prolyl cis-trans isomerase CYP18-2-like [KO:K12733] [EC:5.2.1.8]
107928143  peptidyl-prolyl cis-trans isomerase CYP18-2 [KO:K12733] [EC:5.2.1.8]
107957362  coiled-coil domain-containing protein 12 [KO:K12871]
107942765  coiled-coil domain-containing protein 12 [KO:K12871]
107922165  zinc finger CCCH domain-containing protein 40 [KO:K12872]
107932572  zinc finger CCCH domain-containing protein 40-like [KO:K12872]
107918298  protein BUD31 homolog 2 [KO:K12873]
107929327  protein BUD31 homolog 2 [KO:K12873]
107909088  LOW QUALITY PROTEIN: RNA helicase aquarius [KO:K12874]
107928342  RNA helicase aquarius-like isoform X1 [KO:K12874]
107941967  uncharacterized protein LOC107941967 [KO:K12875]
107906954  uncharacterized protein LOC107906954 [KO:K12875]
107950385  apoptotic chromatin condensation inducer in the nucleus [KO:K12875]
107950386  apoptotic chromatin condensation inducer in the nucleus [KO:K12875]
107951672  apoptotic chromatin condensation inducer in the nucleus [KO:K12875]
107951674  apoptotic chromatin condensation inducer in the nucleus-like isoform X1 [KO:K12875]
107946114  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107958014  pre-mRNA-splicing ATP-dependent RNA helicase prp28-like [KO:K13025] [EC:5.6.2.7]
107920423  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107900113  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107947377  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107937597  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107928882  eukaryotic initiation factor 4A-3 [KO:K13025] [EC:5.6.2.7]
107939456  RNA-binding protein Y14-like [KO:K12876]
107889297  RNA-binding protein Y14-like [KO:K12876]
107945095  RNA-binding protein Y14 [KO:K12876]
107902789  RNA-binding protein Y14-like [KO:K12876]
107891439  RNA-binding protein Y14-like [KO:K12876]
107959274  RNA-binding protein Y14-like [KO:K12876]
107953045  protein mago nashi homolog [KO:K12877]
107923388  protein mago nashi homolog 2 [KO:K12877]
107911862  protein mago nashi homolog [KO:K12877]
107919903  protein mago nashi homolog [KO:K12877]
107927603  THO complex subunit 1 isoform X1 [KO:K12878]
107897015  THO complex subunit 1 isoform X1 [KO:K12878]
107886334  THO complex subunit 2 isoform X1 [KO:K12879]
107909965  LOW QUALITY PROTEIN: THO complex subunit 2 [KO:K12879]
107931189  THO complex subunit 3 [KO:K12880]
107903400  THO complex subunit 3 [KO:K12880]
107959876  THO complex subunit 4A-like isoform X1 [KO:K12881]
107938439  THO complex subunit 4A [KO:K12881]
107950271  THO complex subunit 4A-like [KO:K12881]
107922579  THO complex subunit 4D [KO:K12881]
107926053  THO complex subunit 4A-like isoform X1 [KO:K12881]
107937016  THO complex subunit 4A [KO:K12881]
107937033  THO complex subunit 4D-like [KO:K12881]
107885929  THO complex subunit 4A [KO:K12881]
107954073  THO complex subunit 4A-like [KO:K12881]
107932446  THO complex subunit 4A isoform X1 [KO:K12881]
121225370  THO complex subunit 4A-like [KO:K12881]
107939466  nuclear cap-binding protein subunit 1 [KO:K12882]
107945163  nuclear cap-binding protein subunit 1 [KO:K12882]
107886794  nuclear cap-binding protein subunit 2 isoform X2 [KO:K12883]
107909270  nuclear cap-binding protein subunit 2 isoform X1 [KO:K12883]
107892127  heterogeneous nuclear ribonucleoprotein 1 isoform X1 [KO:K12741]
107948550  UBP1-associated protein 2C [KO:K12741]
107949787  glycine-rich RNA-binding protein 4, mitochondrial [KO:K12741]
107959043  UBP1-associated protein 2B-like [KO:K12741]
107962790  UBP1-associated protein 2B [KO:K12741]
107899743  UBP1-associated protein 2C [KO:K12741]
107906206  UBP1-associated protein 2B-like [KO:K12741]
107954751  heterogeneous nuclear ribonucleoprotein 1 [KO:K12741]
107916320  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
107941451  glycine-rich RNA-binding protein 2, mitochondrial-like [KO:K12741]
107943566  glycine-rich RNA-binding protein 2, mitochondrial [KO:K12741]
107892251  heterogeneous nuclear ribonucleoprotein 1 isoform X1 [KO:K12741]
107954030  heterogeneous nuclear ribonucleoprotein 1 [KO:K12741]
107917736  UBP1-associated protein 2C-like [KO:K12741]
107934006  heterogeneous nuclear ribonucleoprotein A3 homolog 1 [KO:K12741]
107963866  UBP1-associated protein 2B-like [KO:K12741]
107887097  glycine-rich RNA-binding protein 4, mitochondrial [KO:K12741]
107917744  UBP1-associated protein 2C-like [KO:K12741]
107912113  glycine-rich RNA-binding protein 2, mitochondrial [KO:K12741]
107943084  UBP1-associated protein 2B-like [KO:K12741]
107948717  UBP1-associated protein 2C [KO:K12741]
107903667  UBP1-associated protein 2C-like [KO:K12741]
107953481  glycine-rich RNA-binding protein 2, mitochondrial [KO:K12741]
107950061  heterogeneous nuclear ribonucleoprotein 1 [KO:K12741]
121204699  UBP1-associated protein 2A-like [KO:K12741]
107922336  serine/arginine-rich splicing factor SR34A-like [KO:K12890]
107893284  serine/arginine-rich splicing factor SR30 [KO:K12890]
107925472  serine/arginine-rich splicing factor SR34A [KO:K12890]
107914332  serine/arginine-rich splicing factor SR30 isoform X1 [KO:K12890]
107912373  serine/arginine-rich splicing factor SR34B isoform X1 [KO:K12890]
107888319  serine/arginine-rich splicing factor SR30 isoform X1 [KO:K12890]
107893639  serine/arginine-rich splicing factor SR30 isoform X2 [KO:K12890]
107904549  serine/arginine-rich splicing factor SR34A isoform X1 [KO:K12890]
107919887  serine/arginine-rich splicing factor SR30 isoform X1 [KO:K12890]
107930254  serine/arginine-rich splicing factor SR34A isoform X1 [KO:K12890]
107890791  serine/arginine-rich splicing factor SR34A isoform X1 [KO:K12890]
107922771  serine/arginine-rich splicing factor SR34A isoform X1 [KO:K12890]
107924289  serine/arginine-rich splicing factor 1 isoform X1 [KO:K12890]
107948604  serine/arginine-rich splicing factor SC35 [KO:K12891]
107949131  serine/arginine-rich splicing factor SC35 isoform X1 [KO:K12891]
107893983  serine/arginine-rich splicing factor SC35 [KO:K12891]
107920341  serine/arginine-rich splicing factor SC35 [KO:K12891]
121228250  uncharacterized protein LOC121228250 isoform X1 [KO:K12891]
121214820  serine/arginine-rich splicing factor SC35-like [KO:K12891]
107948157  serine/arginine-rich splicing factor RS31 isoform X1 [KO:K12893]
107945907  serine/arginine-rich splicing factor RS31-like isoform X1 [KO:K12893]
107916625  serine/arginine-rich splicing factor RS31 isoform X1 [KO:K12893]
121224407  serine/arginine-rich splicing factor RS40-like isoform X1 [KO:K12893]
107906509  serine/arginine-rich splicing factor RS40-like isoform X1 [KO:K12893]
107930501  serine/arginine-rich splicing factor RS31-like isoform X1 [KO:K12893]
107930734  serine/arginine-rich splicing factor RS2Z33-like isoform X1 [KO:K12896]
107934199  serine/arginine-rich splicing factor RS2Z33 isoform X1 [KO:K12896]
107957972  serine/arginine-rich splicing factor RS2Z33-like isoform X1 [KO:K12896]
107899769  serine/arginine-rich splicing factor RS2Z33 [KO:K12896]
107893476  serine/arginine-rich splicing factor RSZ22-like [KO:K12896]
107920420  serine/arginine-rich splicing factor RS2Z32 isoform X3 [KO:K12896]
107909637  serine/arginine-rich splicing factor RSZ21-like isoform X1 [KO:K12896]
107891162  serine/arginine-rich splicing factor RS2Z32 isoform X1 [KO:K12896]
107940811  serine/arginine-rich splicing factor RS2Z32 isoform X1 [KO:K12896]
107888382  serine/arginine-rich splicing factor RSZ22-like [KO:K12896]
107905262  serine/arginine-rich splicing factor RS2Z33 isoform X1 [KO:K12896]
107906788  serine/arginine-rich splicing factor RSZ22 isoform X1 [KO:K12896]
107941565  serine/arginine-rich splicing factor RS2Z32 isoform X1 [KO:K12896]
107961727  serine/arginine-rich splicing factor RSZ22-like [KO:K12896]
107886612  serine/arginine-rich splicing factor RSZ21 [KO:K12896]
107901642  serine/arginine-rich splicing factor RSZ22-like [KO:K12896]
107937928  serine/arginine-rich splicing factor RSZ22-like [KO:K12896]
107917004  serine/arginine-rich splicing factor SR45a [KO:K12897]
107937840  serine/arginine-rich splicing factor SR45a [KO:K12897]
107947042  serine/arginine-rich splicing factor SR45a isoform X1 [KO:K12897]
107931862  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
107962023  LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
107901967  serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [KO:K12900]
107899205  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
107962942  serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [KO:K12900]
107897639  serine/arginine-rich SC35-like splicing factor SCL28 isoform X1 [KO:K12900]
107934420  serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [KO:K12900]
107916120  serine/arginine-rich SC35-like splicing factor SCL28 isoform X1 [KO:K12900]
107900471  serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
107948474  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
Reference
PMID:19239890
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
PMID:10978320
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
PMID:17537823
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
PMID:19733268
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   
LinkDB

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