KEGG   PATHWAY: zof03040
Entry
zof03040                    Pathway                                
Name
Spliceosome - Zingiber officinale (ginger)
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
zof03040  Spliceosome
zof03040

Other DBs
GO: 0005681
Organism
Zingiber officinale (ginger) [GN:zof]
Gene
122044500  U1 spliceosomal RNA [KO:K14276]
122013006  U1 spliceosomal RNA [KO:K14276]
122033035  U1 spliceosomal RNA [KO:K14276]
121993308  U1 spliceosomal RNA [KO:K14276]
121998825  U1 spliceosomal RNA [KO:K14276]
122022045  U2 spliceosomal RNA [KO:K14277]
122037704  U2 spliceosomal RNA [KO:K14277]
122050004  U2 spliceosomal RNA [KO:K14277]
122013091  U4 spliceosomal RNA [KO:K14278]
122013090  U4 spliceosomal RNA [KO:K14278]
121983430  U4 spliceosomal RNA [KO:K14278]
121992924  U5 spliceosomal RNA [KO:K14279]
121968741  U6 spliceosomal RNA [KO:K14280]
122003353  U6 spliceosomal RNA [KO:K14280]
121989134  DEAD-box ATP-dependent RNA helicase 42-like [KO:K12811] [EC:5.6.2.7]
121998089  DEAD-box ATP-dependent RNA helicase 42-like [KO:K12811] [EC:5.6.2.7]
121989844  DEAD-box ATP-dependent RNA helicase 15-like isoform X1 [KO:K12812] [EC:5.6.2.7]
122051473  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
121998803  DEAD-box ATP-dependent RNA helicase 15-like isoform X1 [KO:K12812] [EC:5.6.2.7]
122056010  DEAD-box ATP-dependent RNA helicase 15 [KO:K12812] [EC:5.6.2.7]
122056195  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like [KO:K12813] [EC:5.6.2.6]
121982496  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like isoform X1 [KO:K12813] [EC:5.6.2.6]
121986401  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like isoform X1 [KO:K12813] [EC:5.6.2.6]
122018862  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like [KO:K12815] [EC:5.6.2.6]
122022590  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like [KO:K12815] [EC:5.6.2.6]
122029792  pre-mRNA-processing factor 17-like isoform X1 [KO:K12816]
121971249  pre-mRNA-processing factor 17-like isoform X1 [KO:K12816]
121978360  pre-mRNA-splicing factor 18-like [KO:K12817]
122009586  pre-mRNA-splicing factor 18-like [KO:K12817]
121970307  pre-mRNA-splicing factor 18-like [KO:K12817]
122015229  pre-mRNA-splicing factor 18-like [KO:K12817]
121989774  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
121976577  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121992151  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121980668  ATP-dependent RNA helicase DEAH12, chloroplastic-like [KO:K12818] [EC:5.6.2.6]
121995498  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
121996095  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121996096  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121996097  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121967114  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [KO:K12818] [EC:5.6.2.6]
122052306  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 isoform X1 [KO:K12818] [EC:5.6.2.6]
121998727  pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like [KO:K12818] [EC:5.6.2.6]
122036388  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
122036398  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
122037805  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
122037813  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
122038016  ATP-dependent RNA helicase DEAH12, chloroplastic-like [KO:K12818] [EC:5.6.2.6]
121971086  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [KO:K12818] [EC:5.6.2.6]
121989748  pre-mRNA-splicing factor SLU7-like [KO:K12819]
121998700  pre-mRNA-splicing factor SLU7 [KO:K12819]
122026891  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [KO:K12820] [EC:5.6.2.6]
122029323  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [KO:K12820] [EC:5.6.2.6]
121977171  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
121993137  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
121997103  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
121972151  probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [KO:K12820] [EC:5.6.2.6]
122056258  small nuclear ribonucleoprotein-associated protein B'-like [KO:K11086]
121989593  small nuclear ribonucleoprotein-associated protein B-like [KO:K11086]
122051732  small nuclear ribonucleoprotein-associated protein B'-like [KO:K11086]
121998533  small nuclear ribonucleoprotein-associated protein B-like [KO:K11086]
121988414  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
122007173  small nuclear ribonucleoprotein SmD1a [KO:K11087]
121981584  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
121997299  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
122038102  small nuclear ribonucleoprotein SmD1a-like [KO:K11087]
122002903  small nuclear ribonucleoprotein SmD1a [KO:K11087]
121976420  probable small nuclear ribonucleoprotein Sm D2 [KO:K11096]
121980935  small nuclear ribonucleoprotein Sm D2-like [KO:K11096]
121984823  small nuclear ribonucleoprotein Sm D2-like [KO:K11096]
121971254  probable small nuclear ribonucleoprotein Sm D2 [KO:K11096]
121967460  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
121982430  small nuclear ribonucleoprotein SmD3b-like isoform X1 [KO:K11088]
122020397  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
122052691  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
122024151  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
121986324  small nuclear ribonucleoprotein SmD3b-like [KO:K11088]
121974642  small nuclear ribonucleoprotein E-like [KO:K11097]
122043135  small nuclear ribonucleoprotein E-like [KO:K11097]
122047667  probable small nuclear ribonucleoprotein E [KO:K11097]
121969511  small nuclear ribonucleoprotein E-like [KO:K11097]
122025728  probable small nuclear ribonucleoprotein F [KO:K11098]
122019586  probable small nuclear ribonucleoprotein F [KO:K11098]
121990252  probable small nuclear ribonucleoprotein F [KO:K11098]
122021884  probable small nuclear ribonucleoprotein F [KO:K11098]
121988444  probable small nuclear ribonucleoprotein G [KO:K11099]
121997327  probable small nuclear ribonucleoprotein G [KO:K11099]
121984241  probable small nuclear ribonucleoprotein G [KO:K11099]
122038328  probable small nuclear ribonucleoprotein G [KO:K11099]
121967261  U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
122052477  U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
122021921  U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
122025133  U1 small nuclear ribonucleoprotein 70 kDa-like [KO:K11093]
121988646  U1 small nuclear ribonucleoprotein A-like isoform X1 [KO:K11091]
121997529  U1 small nuclear ribonucleoprotein A-like isoform X1 [KO:K11091]
121980860  U1 small nuclear ribonucleoprotein C-2-like [KO:K11095]
122036582  U1 small nuclear ribonucleoprotein C-like [KO:K11095]
121984733  U1 small nuclear ribonucleoprotein C-like [KO:K11095]
121971111  U1 small nuclear ribonucleoprotein C-like [KO:K11095]
121967443  pre-mRNA-processing protein 40A-like [KO:K12821]
122036315  pre-mRNA-processing protein 40A-like isoform X1 [KO:K12821]
122052663  pre-mRNA-processing protein 40A-like [KO:K12821]
122053419  pre-mRNA-processing protein 40A-like isoform X1 [KO:K12821]
122027863  RNA-binding protein 25-like isoform X1 [KO:K12822]
122030242  RNA-binding protein 25-like isoform X1 [KO:K12822]
122031740  RNA-binding protein 25-like isoform X1 [KO:K12822]
122034357  RNA-binding protein 25-like isoform X1 [KO:K12822]
122017260  DEAD-box ATP-dependent RNA helicase 46-like isoform X1 [KO:K12823] [EC:5.6.2.7]
122041897  DEAD-box ATP-dependent RNA helicase 20-like [KO:K12823] [EC:5.6.2.7]
121989135  DEAD-box ATP-dependent RNA helicase 20-like [KO:K12823] [EC:5.6.2.7]
122019832  ATP-dependent RNA helicase-like protein DB10 [KO:K12823] [EC:5.6.2.7]
121992675  DEAD-box ATP-dependent RNA helicase 14-like isoform X1 [KO:K12823] [EC:5.6.2.7]
122046421  DEAD-box ATP-dependent RNA helicase 20-like [KO:K12823] [EC:5.6.2.7]
121980315  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
121996635  DEAD-box ATP-dependent RNA helicase 14-like isoform X1 [KO:K12823] [EC:5.6.2.7]
121998091  DEAD-box ATP-dependent RNA helicase 20 isoform X1 [KO:K12823] [EC:5.6.2.7]
122012286  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
122012287  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
122037979  DEAD-box ATP-dependent RNA helicase 46-like [KO:K12823] [EC:5.6.2.7]
122024857  ATP-dependent RNA helicase-like protein DB10 [KO:K12823] [EC:5.6.2.7]
122043510  pre-mRNA-processing protein 40C-like [KO:K12824]
121985480  pre-mRNA-processing protein 40C-like isoform X1 [KO:K12824]
122038465  pre-mRNA-processing protein 40C-like isoform X1 [KO:K12824]
122038466  pre-mRNA-processing protein 40C-like isoform X1 [KO:K12824]
122026975  transcription initiation factor TFIID subunit 15b-like isoform X1 [KO:K13098]
122029434  transcription initiation factor TFIID subunit 15b-like isoform X1 [KO:K13098]
122031750  transcription initiation factor TFIID subunit 15b-like isoform X1 [KO:K13098]
122034328  transcription initiation factor TFIID subunit 15b-like isoform X1 [KO:K13098]
122011865  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
122016463  U2 small nuclear ribonucleoprotein A'-like [KO:K11092]
122056386  U2 small nuclear ribonucleoprotein B''-like isoform X1 [KO:K11094]
121989434  U2 small nuclear ribonucleoprotein B''-like [KO:K11094]
122051855  U2 small nuclear ribonucleoprotein B''-like isoform X1 [KO:K11094]
121998382  U2 small nuclear ribonucleoprotein B''-like [KO:K11094]
121999464  U2 small nuclear ribonucleoprotein B''-like [KO:K11094]
121988534  probable splicing factor 3A subunit 1 [KO:K12825]
121997415  probable splicing factor 3A subunit 1 [KO:K12825]
122009948  splicing factor 3A subunit 2 [KO:K12826]
122010254  splicing factor SF3a60 homolog [KO:K12827]
122016487  splicing factor SF3a60 homolog [KO:K12827]
122056293  splicing factor 3B subunit 1-like [KO:K12828]
121989552  splicing factor 3B subunit 1-like [KO:K12828]
122051765  splicing factor 3B subunit 1-like [KO:K12828]
121998489  splicing factor 3B subunit 1-like [KO:K12828]
121976594  splicing factor 3B subunit 2-like [KO:K12829]
122030854  splicing factor 3B subunit 2-like [KO:K12829]
122033324  splicing factor 3B subunit 2-like [KO:K12829]
121971066  splicing factor 3B subunit 2-like [KO:K12829]
122043477  splicing factor 3B subunit 3-like isoform X1 [KO:K12830]
122048006  splicing factor 3B subunit 3-like isoform X1 [KO:K12830]
122048007  splicing factor 3B subunit 3-like isoform X1 [KO:K12830]
122053279  spliceosome-associated protein 130 A [KO:K12830]
122042433  splicing factor 3B subunit 4-like [KO:K12831]
122005716  splicing factor 3B subunit 4-like [KO:K12831]
122005717  splicing factor 3B subunit 4-like [KO:K12831]
122045501  splicing factor 3B subunit 4-like [KO:K12831]
122046944  splicing factor 3B subunit 4-like [KO:K12831]
122001395  splicing factor 3B subunit 4-like [KO:K12831]
122001396  splicing factor 3B subunit 4-like [KO:K12831]
122040996  splicing factor 3B subunit 4-like [KO:K12831]
122043414  uncharacterized protein At4g14342-like [KO:K12832]
122031319  uncharacterized protein At4g14342-like [KO:K12832]
122031910  uncharacterized protein At4g14342-like isoform X1 [KO:K12832]
122032336  uncharacterized protein At4g14342 isoform X1 [KO:K12832]
122033835  uncharacterized protein At4g14342-like [KO:K12832]
121999406  uncharacterized protein LOC121999406 [KO:K12832]
121999408  uncharacterized protein At4g14342-like [KO:K12832]
122001451  uncharacterized protein At4g14342-like [KO:K12832]
122041376  splicing factor 3B subunit 6-like protein [KO:K12833]
122019859  splicing factor 3B subunit 6-like protein [KO:K12833]
122045875  splicing factor 3B subunit 6-like protein [KO:K12833]
122023680  splicing factor 3B subunit 6-like protein [KO:K12833]
122041638  PHD finger-like domain-containing protein 5A [KO:K12834]
122025732  PHD finger-like domain-containing protein 5A [KO:K12834]
122018471  PHD finger-like domain-containing protein 5A [KO:K12834]
122046163  PHD finger-like domain-containing protein 5A [KO:K12834]
122022664  PHD finger-like domain-containing protein 5A [KO:K12834]
122053752  PHD finger-like domain-containing protein 5A [KO:K12834]
122051419  DEAD-box ATP-dependent RNA helicase 24-like [KO:K12835] [EC:5.6.2.7]
122055671  DEAD-box ATP-dependent RNA helicase 24-like isoform X1 [KO:K12835] [EC:5.6.2.7]
121975226  splicing factor U2af small subunit B-like [KO:K12836]
122008111  splicing factor U2af small subunit B-like [KO:K12836]
121981436  splicing factor U2af small subunit B-like [KO:K12836]
121970134  splicing factor U2af small subunit B-like [KO:K12836]
121985313  splicing factor U2af small subunit B-like [KO:K12836]
122016095  splicing factor U2af small subunit B-like [KO:K12836]
121975260  splicing factor U2af large subunit A-like isoform X1 [KO:K12837]
122006028  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122031055  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122008932  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122033635  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122034005  splicing factor U2af large subunit A-like isoform X1 [KO:K12837]
122014636  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122001737  splicing factor U2af large subunit B-like isoform X1 [KO:K12837]
122041646  survival of motor neuron-related-splicing factor 30-like [KO:K12839]
122046173  survival of motor neuron-related-splicing factor 30-like isoform X1 [KO:K12839]
121982238  survival of motor neuron-related-splicing factor 30-like [KO:K12839]
121982239  survival of motor neuron-related-splicing factor 30-like isoform X1 [KO:K12839]
121986133  survival of motor neuron-related-splicing factor 30-like isoform X1 [KO:K12839]
122007014  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
122008971  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
122015621  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
122002768  DNA-damage-repair/toleration protein DRT111, chloroplastic-like [KO:K12840]
122027264  protein RRC1-like [KO:K12842]
122029752  protein RRC1-like [KO:K12842]
122041766  sm-like protein LSM2 [KO:K12621]
122046290  sm-like protein LSM2 [KO:K12621]
122022890  sm-like protein LSM2 [KO:K12621]
122054014  sm-like protein LSM2 [KO:K12621]
121987976  sm-like protein LSM3A [KO:K12622]
122042842  sm-like protein LSM3A [KO:K12622]
122047366  sm-like protein LSM3A isoform X1 [KO:K12622]
122051298  sm-like protein LSM3B [KO:K12622]
122055784  sm-like protein LSM3B [KO:K12622]
121980903  sm-like protein LSM4 isoform X1 [KO:K12623]
122021045  probable U6 snRNA-associated Sm-like protein LSm4 [KO:K12623]
121984794  probable U6 snRNA-associated Sm-like protein LSm4 [KO:K12623]
122024443  probable U6 snRNA-associated Sm-like protein LSm4 [KO:K12623]
122051367  sm-like protein LSM5 [KO:K12624]
122055725  sm-like protein LSM5 [KO:K12624]
121976688  U6 snRNA-associated Sm-like protein LSm6 [KO:K12625]
121980573  U6 snRNA-associated Sm-like protein LSm6 [KO:K12625]
121970939  U6 snRNA-associated Sm-like protein LSm6 [KO:K12625]
121984485  U6 snRNA-associated Sm-like protein LSm6 [KO:K12625]
121976575  sm-like protein LSM7 [KO:K12626]
121980814  sm-like protein LSM7 [KO:K12626]
121984689  sm-like protein LSM7 [KO:K12626]
121971099  sm-like protein LSM7 [KO:K12626]
121980938  sm-like protein LSM8 [KO:K12627]
121980940  sm-like protein LSM8 isoform X1 [KO:K12627]
121984824  sm-like protein LSM8 [KO:K12627]
121984827  sm-like protein LSM8 isoform X1 [KO:K12627]
122019934  protein RDM16-like isoform X1 [KO:K12843]
122045302  protein RDM16-like isoform X1 [KO:K12843]
122023652  protein RDM16-like isoform X1 [KO:K12843]
122040777  protein RDM16-like isoform X1 [KO:K12843]
122019344  U4/U6 small nuclear ribonucleoprotein PRP4-like protein [KO:K12662]
122051009  U4/U6 small nuclear ribonucleoprotein PRP4-like protein [KO:K12662]
122019904  peptidyl-prolyl cis-trans isomerase CYP22-like [KO:K09567] [EC:5.2.1.8]
122024782  peptidyl-prolyl cis-trans isomerase CYP22-like [KO:K09567] [EC:5.2.1.8]
122031770  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
122034226  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
121999402  U4/U6 small nuclear ribonucleoprotein Prp31 homolog [KO:K12844]
122006021  NHP2-like protein 1 [KO:K12845]
121981170  NHP2-like protein 1 [KO:K12845]
121981172  NHP2-like protein 1 [KO:K12845]
121985048  NHP2-like protein 1 [KO:K12845]
122001729  NHP2-like protein 1 [KO:K12845]
122006678  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [KO:K12846]
122002430  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [KO:K12846]
121991807  U4/U6.U5 tri-snRNP-associated protein 2-like [KO:K12847]
121995708  U4/U6.U5 tri-snRNP-associated protein 2-like [KO:K12847]
122003016  SART-1 family protein DOT2-like [KO:K11984]
122007266  SART-1 family protein DOT2-like [KO:K11984]
121967213  zinc finger matrin-type protein 2-like [KO:K12848]
122052419  zinc finger matrin-type protein 2-like [KO:K12848]
121984215  pre-mRNA-splicing factor 38-like [KO:K12849]
122038327  pre-mRNA-splicing factor 38-like [KO:K12849]
121976036  pre-mRNA splicing factor SR-like 1 isoform X1 [KO:K12850]
121971614  pre-mRNA splicing factor SR-like 1 isoform X1 [KO:K12850]
121981835  110 kDa U5 small nuclear ribonucleoprotein component CLO-like [KO:K12852]
122038126  110 kDa U5 small nuclear ribonucleoprotein component CLO-like [KO:K12852]
122009600  DExH-box ATP-dependent RNA helicase DExH12-like [KO:K12854] [EC:5.6.2.6]
122014490  DExH-box ATP-dependent RNA helicase DExH12-like [KO:K12854] [EC:5.6.2.6]
122017828  protein STABILIZED1-like [KO:K12855]
122008578  protein STABILIZED1-like [KO:K12855]
121970904  pre-mRNA-processing-splicing factor 8A [KO:K12856]
121976723  pre-mRNA-processing-splicing factor 8A [KO:K12856]
122026284  U5 small nuclear ribonucleoprotein 40 kDa protein-like [KO:K12857]
122028706  U5 small nuclear ribonucleoprotein 40 kDa protein-like [KO:K12857]
121992424  DEAD-box ATP-dependent RNA helicase 21-like [KO:K12858] [EC:5.6.2.7]
121996371  DEAD-box ATP-dependent RNA helicase 21-like [KO:K12858] [EC:5.6.2.7]
121976615  thioredoxin-like protein YLS8 [KO:K12859]
121971047  thioredoxin-like protein YLS8 [KO:K12859]
121975170  pre-mRNA-processing factor 19-like [KO:K10599] [EC:2.3.2.27]
121970068  pre-mRNA-processing factor 19-like [KO:K10599] [EC:2.3.2.27]
122038509  pre-mRNA-processing factor 19-like isoform X1 [KO:K10599] [EC:2.3.2.27]
121985862  pre-mRNA-processing factor 19-like isoform X1 [KO:K10599] [EC:2.3.2.27]
122007208  cell division cycle 5-like protein [KO:K12860]
122037783  cell division cycle 5-like protein [KO:K12860]
122002953  cell division cycle 5-like protein [KO:K12860]
122052782  pre-mRNA-splicing factor SPF27 homolog [KO:K12861]
122010207  protein pleiotropic regulatory locus 1-like [KO:K12862]
122016373  protein pleiotropic regulatory locus 1-like [KO:K12862]
121980826  protein CWC15 homolog A-like isoform X1 [KO:K12863]
121981040  protein CWC15 homolog A-like [KO:K12863]
122049237  protein CWC15 homolog B-like [KO:K12863]
122011395  protein CWC15 homolog B-like [KO:K12863]
121984701  protein CWC15 homolog A-like [KO:K12863]
122038047  protein CWC15 homolog A-like [KO:K12863]
122009344  beta-catenin-like protein 1 [KO:K12864]
122009347  beta-catenin-like protein 1 [KO:K12864]
122015472  beta-catenin-like protein 1 [KO:K12864]
122017308  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122017316  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122005479  heat shock 70 kDa protein 1-like [KO:K03283]
122018484  heat shock cognate 70 kDa protein 2-like [KO:K03283]
122026761  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122043232  heat shock cognate 70 kDa protein 2-like [KO:K03283]
122043356  heat shock cognate 70 kDa protein-like [KO:K03283]
122009650  heat shock cognate 70 kDa protein 2-like [KO:K03283]
122047755  heat shock cognate 70 kDa protein 2 [KO:K03283]
122047882  heat shock cognate 70 kDa protein-like [KO:K03283]
122048904  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122048913  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
121968261  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
121981551  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122020021  heat shock 70 kDa protein 4 [KO:K03283]
122051476  heat shock 70 kDa protein 4 [KO:K03283]
121982346  heat shock 70 kDa protein-like [KO:K03283]
121982843  heat shock cognate 70 kDa protein 2-like [KO:K03283]
122022593  heat shock cognate 70 kDa protein 2-like [KO:K03283]
121985433  stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283]
122001198  heat shock 70 kDa protein 18-like [KO:K03283]
122001199  heat shock 70 kDa protein 1-like [KO:K03283]
122001200  heat shock 70 kDa protein 1-like [KO:K03283]
122015216  heat shock cognate 70 kDa protein 2-like [KO:K03283]
122015405  heat shock cognate 70 kDa protein-like [KO:K03283]
122038222  heat shock cognate 70 kDa protein 2-like isoform X1 [KO:K03283]
121986229  heat shock 70 kDa protein-like [KO:K03283]
122006424  uncharacterized protein LOC122006424 isoform X1 [KO:K12865]
122002176  uncharacterized protein LOC122002176 isoform X1 [KO:K12865]
121976406  SNW/SKI-interacting protein A-like [KO:K06063]
121971268  SNW/SKI-interacting protein A-like [KO:K06063]
122047631  pre-mRNA-splicing factor SYF1-like [KO:K12867]
122047822  pre-mRNA-splicing factor SYF1-like [KO:K12867]
122015989  pre-mRNA-splicing factor SYF1-like [KO:K12867]
122016169  pre-mRNA-splicing factor SYF1-like [KO:K12867]
121981094  pre-mRNA-splicing factor syf2-like isoform X1 [KO:K12868]
122038052  pre-mRNA-splicing factor syf2-like isoform X1 [KO:K12868]
122038053  pre-mRNA-splicing factor syf2-like isoform X1 [KO:K12868]
122051039  crooked neck-like protein 1 [KO:K12869]
122051067  crooked neck-like protein 1 [KO:K12869]
122036203  crooked neck-like protein 1 [KO:K12869]
122055651  crooked neck-like protein 1 [KO:K12869]
122009520  pre-mRNA-splicing factor ISY1 homolog [KO:K12870]
122016282  pre-mRNA-splicing factor ISY1 homolog isoform X1 [KO:K12870]
122025227  peptidyl-prolyl cis-trans isomerase CYP18-2-like [KO:K12733] [EC:5.2.1.8]
122021701  peptidyl-prolyl cis-trans isomerase CYP18-2-like [KO:K12733] [EC:5.2.1.8]
122055935  peptidyl-prolyl cis-trans isomerase CYP18-2 [KO:K12733] [EC:5.2.1.8]
121974986  coiled-coil domain-containing protein 12-like [KO:K12871]
121969878  coiled-coil domain-containing protein 12-like [KO:K12871]
121989554  zinc finger CCCH domain-containing protein 40-like isoform X1 [KO:K12872]
121998493  zinc finger CCCH domain-containing protein 40-like [KO:K12872]
122041855  protein BUD31 homolog 2-like [KO:K12873]
122046379  protein BUD31 homolog 2-like [KO:K12873]
122055407  protein BUD31 homolog 2 [KO:K12873]
121993009  RNA helicase aquarius-like [KO:K12874]
121997003  RNA helicase aquarius-like [KO:K12874]
122010300  histone acetyltransferase KAT6A-like [KO:K12875]
121981710  uncharacterized protein LOC121981710 [KO:K12875]
121985578  uncharacterized protein LOC121985578 [KO:K12875]
122016612  apoptotic chromatin condensation inducer in the nucleus-like [KO:K12875]
121975410  eukaryotic initiation factor 4A-III homolog B-like [KO:K13025] [EC:5.6.2.7]
121975887  eukaryotic initiation factor 4A-III homolog B-like [KO:K13025] [EC:5.6.2.7]
122006477  eukaryotic initiation factor 4A-III homolog B [KO:K13025] [EC:5.6.2.7]
121970322  eukaryotic initiation factor 4A-III homolog B-like [KO:K13025] [EC:5.6.2.7]
122002214  eukaryotic initiation factor 4A-III homolog B [KO:K13025] [EC:5.6.2.7]
121975982  RNA-binding protein Y14A-like [KO:K12876]
122027385  RNA-binding protein Y14A-like [KO:K12876]
122006587  RNA-binding protein Y14A-like [KO:K12876]
122029810  RNA-binding protein Y14A-like [KO:K12876]
122030863  RNA-binding protein Y14A-like [KO:K12876]
122033307  RNA-binding protein Y14A-like [KO:K12876]
121971673  RNA-binding protein Y14A-like [KO:K12876]
122002328  RNA-binding protein Y14A-like [KO:K12876]
121980891  protein mago nashi homolog [KO:K12877]
121984777  protein mago nashi homolog [KO:K12877]
121967090  THO complex subunit 1-like isoform X1 [KO:K12878]
122052282  THO complex subunit 1-like [KO:K12878]
121976916  THO complex subunit 2-like isoform X1 [KO:K12879]
121971876  THO complex subunit 2-like isoform X1 [KO:K12879]
122018986  THO complex subunit 3-like [KO:K12880]
122025161  THO complex subunit 3 [KO:K12880]
122003045  THO complex subunit 4B-like [KO:K12881]
122004603  THO complex subunit 4B-like [KO:K12881]
122018647  THO complex subunit 4D-like isoform X1 [KO:K12881]
122043578  THO complex subunit 4A-like [KO:K12881]
122044320  THO complex subunit 4A-like [KO:K12881]
122045354  THO complex subunit 4A-like [KO:K12881]
122007300  THO complex subunit 4B-like [KO:K12881]
121980385  THO complex subunit 4A-like [KO:K12881]
122048183  THO complex subunit 4A-like [KO:K12881]
122048457  THO complex subunit 4A-like [KO:K12881]
122010634  THO complex subunit 4A-like [KO:K12881]
121982367  THO complex subunit 4D-like [KO:K12881]
121984286  THO complex subunit 4A-like [KO:K12881]
122022445  THO complex subunit 4D-like isoform X1 [KO:K12881]
122055029  THO complex subunit 4A-like [KO:K12881]
121986256  THO complex subunit 4D-like [KO:K12881]
121986768  THO complex subunit 4A-like [KO:K12881]
122040838  THO complex subunit 4A-like [KO:K12881]
122031748  nuclear cap-binding protein subunit 1-like [KO:K12882]
122031753  nuclear cap-binding protein subunit 1-like [KO:K12882]
121972938  nuclear cap-binding protein subunit 1-like [KO:K12882]
122010223  nuclear cap-binding protein subunit 2-like [KO:K12883]
122016393  nuclear cap-binding protein subunit 2-like [KO:K12883]
122056699  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
122056701  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
122004220  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
122042131  glycine-rich RNA-binding protein 2, mitochondrial-like [KO:K12741]
121989136  heterogeneous nuclear ribonucleoprotein A/B-like isoform X1 [KO:K12741]
122017920  glycine-rich RNA-binding protein 4, mitochondrial-like [KO:K12741]
122027716  glycine-rich RNA-binding protein 4, mitochondrial-like [KO:K12741]
122028972  UBP1-associated protein 2C-like [KO:K12741]
121991921  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
122007061  glycine-rich RNA-binding protein 2, mitochondrial-like [KO:K12741]
122007114  heterogeneous nuclear ribonucleoprotein A2 homolog 1-like [KO:K12741]
121977470  UBP1-associated protein 2C-like [KO:K12741]
121978392  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
122030245  glycine-rich RNA-binding protein 2, mitochondrial-like [KO:K12741]
122031182  UBP1-associated protein 2B-like [KO:K12741]
122046665  glycine-rich RNA-binding protein 2, mitochondrial-like [KO:K12741]
122008827  UBP1-associated protein 2B-like [KO:K12741]
122008845  heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog [KO:K12741]
122008923  glycine-rich RNA-binding protein 4, mitochondrial-like [KO:K12741]
122031314  RNA-binding protein 24-B-like [KO:K12741]
121995826  heterogeneous nuclear ribonucleoprotein A3 homolog 2-like [KO:K12741]
122047937  RNA-binding protein P-like [KO:K12741]
121967550  RNA-binding protein P-like [KO:K12741]
121967706  UBP1-associated protein 2B-like [KO:K12741]
121998092  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
122052216  heterogeneous nuclear ribonucleoprotein 1-like [KO:K12741]
122036535  UBP1-associated protein 2C-like [KO:K12741]
122052780  RNA-binding protein P-like [KO:K12741]
122052949  UBP1-associated protein 2B-like [KO:K12741]
121970573  UBP1-associated protein 2C-like [KO:K12741]
122015103  UBP1-associated protein 2B-like [KO:K12741]
122015878  heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog [KO:K12741]
121972327  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
121972361  UBP1-associated protein 2B-like [KO:K12741]
122002364  glycine-rich RNA-binding protein 3, mitochondrial-like [KO:K12741]
122002789  glycine-rich RNA-binding protein blt801-like [KO:K12741]
122002844  heterogeneous nuclear ribonucleoprotein A2 homolog 1-like [KO:K12741]
122016327  RNA-binding protein P-like [KO:K12741]
122019703  serine/arginine-rich-splicing factor SR34-like isoform X1 [KO:K12890]
121981975  serine/arginine-rich splicing factor SR30-like isoform X1 [KO:K12890]
122020310  serine/arginine-rich splicing factor SR34A-like isoform X1 [KO:K12890]
122035864  serine/arginine-rich splicing factor SR34A-like [KO:K12890]
122037102  serine/arginine-rich splicing factor SR34B-like isoform X1 [KO:K12890]
122022744  serine/arginine-rich-splicing factor SR34-like isoform X1 [KO:K12890]
122022750  serine/arginine-rich splicing factor SR34A-like isoform X1 [KO:K12890]
121985831  serine/arginine-rich splicing factor SR30-like isoform X1 [KO:K12890]
121967341  serine/arginine-rich splicing factor SC35-like [KO:K12891]
121982353  serine/arginine-rich splicing factor SC35-like [KO:K12891]
122052554  serine/arginine-rich splicing factor SC35-like [KO:K12891]
122041393  serine/arginine-rich splicing factor RS31-like [KO:K12893]
122019995  serine/arginine-rich splicing factor RS31-like isoform X1 [KO:K12893]
122045885  serine/arginine-rich splicing factor RS31-like [KO:K12893]
121980152  serine/arginine-rich splicing factor RS41-like isoform X1 [KO:K12893]
122037967  serine/arginine-rich splicing factor RS41-like isoform X1 [KO:K12893]
122023653  serine/arginine-rich splicing factor RS31-like isoform X1 [KO:K12893]
122042690  serine/arginine-rich splicing factor RSZ21A-like isoform X1 [KO:K12896]
122008826  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
122031229  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
122047207  serine/arginine-rich splicing factor RSZ21A-like isoform X1 [KO:K12896]
121980394  serine/arginine-rich splicing factor RS2Z33-like isoform X1 [KO:K12896]
121981677  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
121982436  serine/arginine-rich splicing factor RSZ21-like isoform X1 [KO:K12896]
122020455  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
121984296  serine/arginine-rich splicing factor RS2Z32-like [KO:K12896]
122015091  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
122038110  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
121972407  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
121986342  serine/arginine-rich splicing factor RSZ21-like isoform X1 [KO:K12896]
122024559  serine/arginine-rich splicing factor RSZ21A-like [KO:K12896]
122031901  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
122051125  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
122020173  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
122055922  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
122024562  serine/arginine-rich splicing factor SR45a-like [KO:K12897]
121991880  serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
122030980  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
121993149  serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
122008746  serine/arginine-rich SC35-like splicing factor SCL28 [KO:K12900]
122031798  serine/arginine-rich SC35-like splicing factor SCL28 isoform X1 [KO:K12900]
121995785  serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [KO:K12900]
121997113  serine/arginine-rich SC35-like splicing factor SCL30 [KO:K12900]
122015460  serine/arginine-rich SC35-like splicing factor SCL28 [KO:K12900]
121972082  serine/arginine-rich SC35-like splicing factor SCL33 [KO:K12900]
121972984  serine/arginine-rich SC35-like splicing factor SCL28 [KO:K12900]
Reference
PMID:19239890
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
PMID:10978320
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
PMID:17537823
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
PMID:19733268
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   
LinkDB

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