SSDB Best Search Result

Entry:tpv:TP03_0373 (451 a.a.)
Name:ATP-dependent RNA helicase
KO:K12812 ATP-dependent RNA helicase UAP56/SUB2
Show :
Threshold:
  

Search Result : 210 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pfa:PF3D7_0209800 ATP-dependent RNA helicase UAP56      K12812     457     1989     0.657      452     
spo:2542433 TREX complex subunit, ATP-dependent RNA hel K12812     434     1883     0.649      442     
zma:100273717 uncharacterized protein LOC100273717      K12812     429     1809     0.624      450     
mdm:103456194 DEAD-box ATP-dependent RNA helicase 15 is K12812     426     1803     0.621      448     
cne:CNA07200 ATP dependent RNA helicase, putative       K12812     442     1800     0.625      443     
osa:4326192 dEAD-box ATP-dependent RNA helicase 56      K12812     432     1798     0.627      445     
csv:101217346 DEAD-box ATP-dependent RNA helicase 56    K12812     427     1789     0.618      448     
ocu:100349333 spliceosome RNA helicase DDX39B           K12812     428     1786     0.617      449     
fca:101083847 spliceosome RNA helicase DDX39B           K12812     428     1786     0.617      449     
dme:Dmel_CG7269 helicase at 25E, isoform A              K12812     424     1786     0.630      441     
cfa:474839 spliceosome RNA helicase DDX39B              K12812     428     1784     0.617      449     
mmu:53817 DEAD box helicase 39b                         K12812     428     1784     0.615      449     
rno:114612 spliceosome RNA helicase Ddx39b              K12812     428     1784     0.615      449     
hsa:7919 DExD-box helicase 39B                          K12812     428     1782     0.615      449     
tps:THAPSDRAFT_269556 dead box family RNA helicase      K12812     433     1782     0.611      450     
ecb:100146384 spliceosome RNA helicase DDX39B           K12812     428     1782     0.615      449     
mcc:715233 spliceosome RNA helicase DDX39B              K12812     428     1782     0.615      449     
bta:540191 spliceosome RNA helicase DDX39B              K12812     428     1782     0.615      449     
ssc:448813 spliceosome RNA helicase DDX39B              K12812     428     1782     0.615      449     
vvi:100250852 DEAD-box ATP-dependent RNA helicase 15    K12812     428     1780     0.624      442     
aga:1280031 ATP-dependent RNA helicase WM6              K12812     423     1780     0.621      441     
sly:101259772 DEAD-box ATP-dependent RNA helicase 15 is K12812     427     1779     0.612      448     
gmx:100785358 DEAD-box ATP-dependent RNA helicase 15    K12812     426     1779     0.629      442     
dre:406249 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab  K13182     427     1778     0.619      451     
aag:5569076 ATP-dependent RNA helicase WM6              K12812     423     1776     0.617      441     
mdo:100020548 DExD-box helicase 39A                     K13182     427     1773     0.616      451     
pti:PHATRDRAFT_51301 hypothetical protein               K12812     428     1772     0.609      442     
cit:102618350 DEAD-box ATP-dependent RNA helicase 15    K12812     427     1771     0.611      447     
cal:CAALFM_C400220CA ATP-dependent RNA helicase         K12812     433     1771     0.607      445     
ath:AT5G11170 DEAD/DEAH box RNA helicase family protein K12812     427     1769     0.626      441     
xla:379310 DEAD-box helicase 39A S homeolog             K13182     427     1768     0.614      451     
ola:101168128 ATP-dependent RNA helicase DDX39A         K13182     427     1765     0.605      448     
tca:662877 ATP-dependent RNA helicase WM6               K12812     425     1765     0.617      441     
mtr:25491302 DEAD-box ATP-dependent RNA helicase 15 iso K12812     426     1763     0.622      445     
xtr:394669 spliceosome RNA helicase DDX39B              K12812     428     1763     0.608      452     
ame:552515 ATP-dependent RNA helicase WM6               K12812     424     1762     0.617      441     
rcu:8282320 DEAD-box ATP-dependent RNA helicase 15      K12812     427     1756     0.620      442     
aor:AO090120000149 unnamed protein product; ATP-depende K12812     441     1735     0.598      450     
bmor:101741115 ATP-dependent RNA helicase WM6           K12812     425     1732     0.612      441     
mgr:MGG_02806 ATP-dependent RNA helicase SUB2           K12812     436     1728     0.591      445     
ncr:NCU09076 ATP-dependent RNA helicase                 K12812     434     1727     0.584      442     
afm:AFUA_6G02630 ATP dependent RNA helicase (Sub2)      K12812     448     1705     0.591      457     
cel:CELE_C26D10.2 Spliceosome RNA helicase DDX39B homol K12812     425     1698     0.603      441     
kla:KLLA0_E21935g uncharacterized protein               K12812     437     1685     0.573      445     
fgr:FGSG_08663 ATP-dependent RNA helicase SUB2          K12812     434     1679     0.566      442     
sce:YDL084W ATP-dependent RNA helicase SUB2             K12812     446     1674     0.568      454     
cre:CHLRE_17g719000v5 uncharacterized protein           K12812     435     1627     0.591      455     
ddi:DDB_G0269932 ATP-dependent RNA helicase             K12812     428     1584     0.551      452     
tbr:Tb10.70.7730 ATP-dependent DEAD/H RNA helicase, put K12812     436     1347     0.492      423     
lma:LMJF_21_1552 putative RNA helicase                  K12812     435     1339     0.490      420     
ani:ANIA_08722 ATP-dependent RNA helicase SUB2          K12812     369     1296     0.588      347     
vg:26049201 Chrysochromulina ericina virus; Helicase 45            397      874     0.364      385     
gga:419783 probable ATP-dependent RNA helicase DDX6     K12614     483      850     0.364      396     
mab:MAB_1403 Probable cold-shock DEAD box protein A hom K05592     598      798     0.348      385     
bth:BT_1885 putative ATP-dependent RNA helicase         K11927     374      794     0.368      375     
btk:BT9727_0219 DEAD/DEAH box helicase                  K05592     528      792     0.353      397     
ban:BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box f K05592     528      792     0.353      397     
cac:CA_C2748 ATP dependent RNA helicase DeaD, superfami K05592     481      773     0.362      392     
hpy:HP_0247 ATP-dependent RNA helicase, DEAD-box family K05592     492      771     0.338      393     
msm:MSMEG_5042 ATP-dependent rna helicase, dead/deah bo K05592     581      768     0.336      393     
cdi:DIP1018 DEAD-box helicase                           K05592     680      767     0.327      443     
hpj:jhp_0232 ATP-DEPENDENT RNA HELICASE DEAD            K05592     491      766     0.336      393     
bce:BC0259 ATP-dependent RNA helicase                   K05592     514      764     0.358      380     
smu:SMU_611 putative ATP-dependent RNA helicase, DEAD-b K05592     517      764     0.366      388     
lpl:lp_0520 ATP-dependent RNA helicase                  K05592     528      763     0.365      375     
cte:CT0597 ATP-dependent RNA helicase DeaD              K05592     657      762     0.331      414     
ljo:LJ_0270 probable RNA helicase                       K05592     484      759     0.351      396     
cdf:CD630_07610 putative ATP-dependent RNA helicase     K05592     537      757     0.336      396     
sfl:SF3203 inducible ATP-independent RNA helicase       K05592     646      757     0.355      392     
ece:Z4523 inducible ATP-independent RNA helicase        K05592     646      757     0.355      392     
rha:RHA1_ro06038 probable cold-shock DEAD-box protein   K05592     586      754     0.341      393     
efa:EF0846 ATP-dependent RNA helicase, DEAD/DEAH box fa K05592     536      753     0.356      374     
stm:STM3280 cysteine sulfinate desulfinase              K05592     646      750     0.352      392     
sty:STY3461 ATP-dependent RNA helicase (dead-box protei K05592     646      749     0.352      392     
ecs:ECs_4043 ATP-dependent RNA helicase                 K05592     629      749     0.357      384     
eco:b3162 ATP-dependent RNA helicase DeaD               K05592     629      749     0.357      384     
ecj:JW5531 ATP-dependent RNA helicase                   K05592     629      749     0.357      384     
cgl:Cgl1156 Superfamily II DNA and RNA helicases        K05592     732      747     0.337      392     
seo:STM14_3962 ATP-dependent RNA helicase DeaD          K05592     629      742     0.354      384     
spr:spr1440 Conserved hypothetical protein              K05592     524      742     0.346      393     
spn:SP_1586 putative ATP-dependent RNA helicase         K05592     524      742     0.346      393     
lin:lin0859 similar to ATP-dependent RNA helicase       K05592     516      742     0.347      386     
enc:ECL_04544 ATP-dependent RNA helicase DeaD           K05592     631      741     0.352      384     
eba:ebA5738 ATP-dependent RNA helicase DeaD             K05592     658      741     0.355      389     
lmo:lmo0866 ATP-dependent RNA helicase                  K05592     520      741     0.347      386     
cro:ROD_46701 ATP-dependent RNA helicase (DEAD-box prot K05592     626      740     0.352      384     
kpn:KPN_03570 cold-shock DeaD box ATP-dependent RNA hel K05592     643      740     0.351      385     
mtu:Rv1253 ATP-dependent RNA helicase DeaD              K05592     563      740     0.338      399     
mtc:MT1292 ATP-dependent RNA helicase DeaD              K05592     563      740     0.338      399     
yen:YE0440 cold-shock dead-box protein A                K05592     657      739     0.341      387     
spy:SPy_1415 putative ATP-dependent RNA helicase        K05592     539      738     0.370      378     
smar:SM39_4779 ATP-dependent RNA helicase               K05592     640      737     0.345      386     
yps:YPTB0486 cold-shock dead-box protein A              K05592     664      735     0.346      387     
ypk:y0696 inducible ATP-independent RNA helicase        K05592     669      735     0.346      387     
ype:YPO3488 cold-shock dead-box protein A               K05592     664      735     0.346      387     
xac:XAC2813 ATP-dependent RNA helicase                  K05592     632      735     0.333      384     
xcc:XCC2642 ATP-dependent RNA helicase                  K05592     642      734     0.339      384     
xom:XOO1438 ATP-dependent RNA helicase                  K05592     634      731     0.339      384     
hdu:HD_1590 cold-shock DEAD box protein-A               K05592     606      730     0.333      384     
hin:HI_0231 ATP-dependent RNA helicase (deaD)           K05592     613      730     0.350      386     
cbo:CBO2802 ATP-dependent RNA helicase (cold-shock dead K05592     524      728     0.335      397     
cpe:CPE1396 ATP-dependent RNA helicase                  K05592     528      728     0.345      391     
apl:APL_0575 cold-shock DEAD box protein A-like protein K05592     619      727     0.336      384     
lcb:LCABL_27300 ATP-dependent RNA helicase              K05592     502      726     0.342      395     
bja:bll1447 dead-box ATP-dependent RNA helicase         K11927     530      725     0.346      384     
ddd:Dda3937_02335 ATP-dependent RNA helicase            K05592     631      723     0.345      386     
eca:ECA0718 ATP-independent RNA helicase                K05592     637      718     0.339      387     
xfa:XF_0252 ATP-dependent RNA helicase                  K05592     614      716     0.341      375     
bsu:BSU04580 ATP-dependent RNA helicase                 K05592     511      716     0.321      402     
lpn:lpg2345 ATP-dependent RNA helicase                  K05592     589      713     0.332      391     
buc:BU372 ATP-dependent RNA helicase deaD               K05592     601      711     0.339      387     
son:SO_3783 ATP-dependent RNA helicase RhlE             K11927     535      710     0.325      375     
pmu:PM1112 DeaD                                         K05592     610      709     0.331      384     
eam:EAMY_0355 Cold-shock DEAD box protein A             K05592     638      708     0.327      385     
ftu:FTT_1471c Cold-shock DEAD-box protein A             K05592     569      708     0.329      365     
reh:H16_A0531 ATP-dependent RNA helicase                K11927     520      706     0.326      396     
vfi:VF_A0151 RNA helicase                               K11927     500      706     0.342      366     
bma:BMA1917 ATP-dependent RNA helicase RhlE             K11927     482      705     0.338      382     
bps:BPSL1114 putative ATP-dependent RNA helicase 2      K11927     482      705     0.338      382     
llm:llmg_0369 ATP-dependent RNA helicase                K05592     551      702     0.351      365     
psb:Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DE K05592     557      702     0.317      398     
pma:Pro_1094 Superfamily II DNA/RNA helicase            K05592     603      701     0.330      391     
pst:PSPTO_1775 ATP-dependent RNA helicase, DEAD box fam K05592     562      700     0.317      398     
lla:L0339 ATP-dependent RNA helicase                    K05592     547      700     0.351      365     
vpa:VPA0608 ATP-dependent RNA helicase DeaD             K05592     643      699     0.341      384     
dvu:DVU_3310 ATP-dependent RNA helicase, DEAD/DEAH fami K05592     532      698     0.331      393     
rso:RSc0539 probable atp-dependent rna helicase protein K11927     540      698     0.320      388     
bxe:Bxe_A3295 Putative ATP-dependent RNA helicase 2     K11927     491      695     0.335      382     
lil:LA_4049 DEAD/DEAH box helicase                      K05592     516      694     0.321      386     
avn:Avin_15370 ATP-dependent RNA helicase, DEAD/DEAH bo K05592     558      692     0.322      385     
bfr:BF1660 ATP-dependent RNA helicase DeaD              K11927     427      691     0.344      381     
bpe:BP3057 putative ATP-dependent RNA helicase                     574      690     0.324      370     
rpa:TX73_019020 DEAD/DEAH box helicase                  K11927     473      689     0.332      386     
tko:TK0306 DEAD/DEAH box RNA helicase                   K05592     406      686     0.347      395     
hth:HTH_0805 ATP-dependent RNA helicase                 K05592     365      685     0.341      369     
pae:PA0428 ATP-dependent RNA helicase                   K11927     639      685     0.320      375     
fps:FP1701 Probable ATP-dependent RNA helicase, DEAD/DE K11927     414      682     0.328      384     
mca:MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box f K11927     453      682     0.342      366     
ppu:PP_1868 ATP-dependent DEAD-box RNA helicase DeaD    K05592     559      682     0.317      398     
ser:SERP1688 ATP-dependent RNA helicase, DEAD/DEAH box  K05592     509      681     0.317      379     
sao:SAOUHSC_02316 DEAD-box ATP dependent DNA helicase   K05592     506      680     0.314      379     
sau:SA1885 ORFID:SA1885; hypothetical protein, similar  K05592     506      680     0.314      379     
nme:NMB1422 putative ATP-dependent RNA helicase         K11927     457      680     0.338      376     
ana:alr1223 ATP-dependent RNA helicase                  K05592     513      679     0.349      370     
sct:SCAT_4022 conserved protein of unknown function                789      678     0.332      404     
gvi:gll2508 ATP-dependent RNA helicase DeaD homolog; OR K05592     437      678     0.323      396     
ngo:NGO_0149 RNA helicase                               K11927     457      676     0.344      366     
nmr:Nmar_1182 DEAD/DEAH box helicase domain protein     K05592     440      675     0.343      362     
vvu:VV2_0147 Cold-shock DEAD-box protein A              K05592     641      675     0.336      384     
amd:AMED_1108 ATP-dependent RNA helicase                           598      673     0.326      383     
npu:Npun_R3595 DEAD/DEAH box helicase domain protein    K11927     443      671     0.323      378     
syn:slr0083 ATP-dependent RNA helicase; DeaD            K05592     492      669     0.323      390     
vch:VC_A0804 ATP-dependent RNA helicase DeaD            K05592     663      662     0.330      406     
mja:MJ_0669 ATP-dependent RNA helicase, DEAD-family (de K05592     367      655     0.332      385     
fnu:FN1975 ATP-dependent RNA helicase                   K05592     528      653     0.328      393     
aci:ACIAD1314 ATP-dependent RNA helicase (DEAD box)     K03732     383      652     0.315      381     
atu:Atu2333 ATP-dependent RNA helicase                  K11927     502      651     0.328      387     
sme:SM_b20880 putative ATP-dependent RNA helicase prote K11927     503      650     0.337      395     
cau:Caur_3084 DEAD/DEAH box helicase domain protein     K05592     552      648     0.300      393     
gsu:GSU0914 ATP-dependent RNA helicase RhlE             K11927     447      648     0.325      375     
mmp:MMP0457 Probable ATP dependent RNA helicase         K05592     538      647     0.319      392     
rpr:RP669 PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhl            407      646     0.321      365     
sma:SAVERM_3098 putative ATP-dependent RNA helicase                759      644     0.349      372     
mlo:mll0224 probable ATP-dependent RNA helicase                    527      643     0.319      392     
ccr:CC_0835 ATP-dependent RNA helicase, DEAD/DEAH box f K11927     476      643     0.328      393     
acb:A1S_2260 ATP-dependent RNA helicase (DEAD box)      K03732     383      642     0.311      380     
wol:WD_1236 ATP-dependent RNA helicase, DeaD/DeaH box f            408      642     0.329      383     
mth:MTH_203 ATP-dependent RNA helicase, eIF-4A family   K05592     425      642     0.321      365     
rco:RC1020 ATP-dependent RNA helicase RhlE                         414      640     0.323      365     
sgr:SGR_2359 putative ATP-dependent RNA helicase                   731      639     0.341      370     
ret:RHE_CH03152 ATP-dependent RNA helicase protein      K11927     560      639     0.324      398     
mle:ML0811 putative ATP-dependent RNA helicase                     544      639     0.313      402     
rru:Rru_A2718 DEAD/DEAH box helicase                               799      637     0.325      385     
afu:AF_2254 ATP-dependent RNA helicase, DEAD-family (de K05592     368      635     0.334      380     
mba:Mbar_A0145 ATP-dependent RNA helicase               K05592     579      632     0.333      366     
sgu:SGLAU_22145 ATP-dependent RNA helicase                         875      631     0.358      372     
sco:SCO5166 putative helicase                                      879      631     0.341      370     
rle:RL3597 putative DEAD box ATP-dependent RNA helicase K11927     576      630     0.317      398     
tde:TDE_2109 ATP-dependent RNA helicase, DEAD/DEAH box  K05592     570      620     0.315      390     
tth:TT_C1895 heat resistant RNA dependent ATPase        K05592     517      619     0.307      375     
bmf:BAB1_1072 ATP-dependent helicase, DEAD-box:DEAD/DEA K11927     531      616     0.315      394     
bme:BMEI0934 ATP-dependent RNA helicase rhle            K11927     535      616     0.315      394     
ksk:KSE_48730 putative ATP-dependent RNA helicase                  884      612     0.334      371     
bms:BR1052 ATP-dependent RNA helicase, DEAD/DEAH box fa K11927     535      610     0.315      394     
rsp:RSP_2536 ATP-dependent helicase, DEAD-box                      518      609     0.306      396     
sai:Saci_1090 ATP-dependent helicase                               340      606     0.351      373     
tpa:TP_0770 ATP-dependent RNA helicase                  K05592     649      606     0.314      392     
tac:Ta0297 probable DEAD box protein                    K05592     388      577     0.306      376     
sso:SSO2036 ATP-dependent RNA helicase                             360      577     0.333      357     
pde:Pden_1743 DEAD/DEAH box helicase domain protein     K11927     479      570     0.304      368     
aae:aq_613 ATP-dependent RNA helicase DeaD                         293      524     0.343      309     
mge:MG_425 ATP-dependent RNA helicase, DEAD/DEAH box fa            449      508     0.267      390     
mpn:MPN_623 ATP-dependent RNA helicase deaD-like protei            450      475     0.260      392     
blo:BL0909 possible ATP-dependent RNA helicase                     728      457     0.279      398     
dra:DR_0335 ATP-dependent RNA helicase, putative                   478      371     0.248      440     
hvo:HVO_1333 ATP-dependent DNA helicase                 K03724     946      311     0.268      407     
pai:PAE2362 ATP-dependent helicase                      K03724     928      301     0.272      379     
hma:rrnAC1139 ATP-dependent helicase                    K03724     944      288     0.263      414     
hal:VNG_1251G ATP-dependent helicase                    K03724     946      257     0.257      404     
pfu:PF1504 large helicase-related protein               K03724     980      234     0.249      358     
ape:APE_2188.1 putative ATP-dependent helicase          K03724     948      225     0.235      371     
mta:Moth_0640 Helicase-like protein                                972      165     0.223      282     
syf:Synpcc7942_1301 ATP-dependent DNA helicase RecQ     K03654     487      154     0.298      131     
syc:syc0252_c ATP-dependent DNA helicase RecQ           K03654     473      154     0.298      131     
ctb:CTL0849 excinuclease ABC subunit B                  K03702     668      140     0.221      154     
ctr:CT_586 excinuclease ABC subunit B                   K03702     668      140     0.221      154     
cpn:CPn_0801 Exinuclease ABC Subunit B                  K03702     657      140     0.236      148     
tel:tlr0800 ATP-dependent DNA helicase                  K03654     483      136     0.241      170     
pab:PAB2313 Probable ATP-dependent RNA helicase         K03725     855      131     0.234      312     
cje:Cj0475 50S ribosomal protein L1                     K02863     233      116     0.243      140     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]