SSDB Best Search Result

Entry:cin:445733 (734 a.a.)
Name:collagen type IX-like precursor
KO:K08131 collagen type IX alpha
Show :
Threshold:
  

Search Result : 157 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ssc:100155319 collagen alpha-1(IX) chain isoform X1     K08131     922     2173     0.481      684     
bta:282195 collagen alpha-1(IX) chain                   K08131    1009     2168     0.490      673     
fca:101086148 collagen alpha-1(IX) chain                K08131     921     2161     0.493      674     
ecb:100057208 collagen alpha-1(IX) chain isoform X1     K08131     919     2157     0.490      670     
cfa:481873 collagen alpha-1(IX) chain isoform X1        K08131     921     2141     0.490      670     
mmu:12839 collagen, type IX, alpha 1                    K08131     921     2136     0.487      670     
rno:305104 collagen alpha-1(IX) chain precursor         K08131     934     2131     0.485      670     
ocu:103349793 collagen alpha-1(IX) chain isoform X1     K08131     921     2120     0.485      672     
hsa:1297 collagen type IX alpha 1 chain                 K08131     921     2117     0.487      673     
gga:771873 collagen alpha-1(IX) chain precursor         K08131     920     2115     0.472      689     
mcc:714809 collagen alpha-1(IX) chain isoform X4        K08131     678     2103     0.481      670     
mdo:100020680 collagen type IX alpha 1 chain            K08131     919     2084     0.472      706     
xtr:100145133 collagen alpha-1(IX) chain isoform X1     K08131     923     2069     0.461      705     
xla:398560 collagen alpha-1(IX) chain isoform X1        K08131     786     2038     0.459      706     
dre:406548 collagen, type IX, alpha 1b precursor        K08131     681     2031     0.471      671     
ola:101156602 collagen alpha-1(IX) chain                K08131     676     2023     0.476      670     
tca:660112 fibril-forming collagen alpha chain          K19719    1545     1871     0.430      781     
aga:1281010 collagen alpha-1(I) chain                   K19719    1560     1864     0.437      756     
ame:410038 collagen alpha-1(I) chain                    K19719    1501     1847     0.430      717     
aag:110678066 collagen alpha-1(I) chain-like            K19719    1564     1841     0.433      780     
bmor:101736673 collagen alpha-1(I) chain                K19721    1777     1839     0.425      723     
vg:26680435 White spot syndrome virus; collagen-like pr           1684     1733     0.422      729     
cel:CELE_F01G12.5 Collagen alpha-2(IV) chain            K06237    1758     1714     0.416      716     
dme:Dmel_CG4145 collagen type IV alpha 1, isoform A     K06237    1779     1686     0.423      732     
bce:BC3345 Collagen-like triple helix repeat protein               837     1657     0.413      712     
btk:BT9727_3456 conserved hypothetical protein, possibl           1168     1638     0.406      683     
mlo:mlr0587 hypothetical glycine-rich protein                     3145     1488     0.383      669     
nmr:Nmar_0682 Collagen triple helix repeat                         542     1212     0.425      482     
cdf:CD630_33490 Exosporium glycoprotein BclA3                      661     1118     0.378      555     
mtc:MT3615.3 PE_PGRS family protein                               1217     1049     0.351      680     
mtu:Rv0578c PE-PGRS family protein PE_PGRS7                       1306     1003     0.359      683     
lpn:lpg2644 tail fiber protein                                     493      932     0.450      342     
spr:spr1403 Hypothetical protein                                  2551      921     0.315      765     
tbr:Tb927.7.6580 hypothetical protein                             1076      888     0.305      715     
ecs:ECs_1228 phage tail fiber protein                              645      853     0.424      340     
ece:Z1483 putative tail fiber protein of bacteriophage             645      853     0.424      340     
sco:SCO2669 hypothetical protein SC6D10.12                         604      846     0.381      491     
ban:BA_4978 collagen triple helix repeat domain protein            469      785     0.390      331     
cre:CHLRE_09g411050v5 uncharacterized protein                     1771      767     0.309      708     
sma:SAVERM_3556 putative secreted protein                          903      748     0.309      757     
sly:138337172 uncharacterized protein                              485      702     0.362      492     
sgu:SGLAU_14195 hypothetical protein                               934      694     0.320      585     
tps:THAPSDRAFT_24959 predicted protein                            1480      643     0.302      688     
ksk:KSE_51350 putative two-component system sensor kina           1335      634     0.320      647     
msm:MSMEG_0868 hypothetical protein                               1274      630     0.308      668     
npu:Npun_F1670 Collagen triple helix repeat-containing             971      623     0.459      246     
ani:ANIA_03032 hypothetical protein                                432      618     0.345      342     
gmx:102662611 glycine-rich cell wall structural protein            572      603     0.340      585     
cpe:CPE0955 collagen-like protein                                  397      602     0.503      187     
sgr:SGR_4389 hypothetical protein                                  856      598     0.293      750     
csv:105435039 glycine-rich cell wall structural protein            565      589     0.314      583     
zma:118473575 glycine-rich cell wall structural protein            454      585     0.337      460     
mtr:120575812 glycine-rich cell wall structural protein            495      584     0.322      515     
sct:SCAT_3399 protein of unknown function                          723      551     0.323      434     
ath:AT5G07570 glycine/proline-rich protein                        1389      543     0.299      746     
osa:107280802 glycine-rich cell wall structural protein            486      541     0.343      426     
spy:SPy_1983 collagen-like surface protei                          348      540     0.471      189     
mgr:MGG_02667 hypothetical protein                                1008      538     0.291      629     
vvi:132254747 glycine-rich cell wall structural protein            473      534     0.349      415     
ncr:NCU02592 chitin synthase activator                            1029      530     0.295      650     
fgr:FGSG_07934 hypothetical protein                               1358      518     0.259      757     
pti:PHATRDRAFT_45854 hypothetical protein               K14297    1689      505     0.298      607     
ddi:DDB_G0277909 calcium-binding protein                           467      496     0.330      358     
amd:AMED_6338 translation initiation factor IF-2        K02519    1004      491     0.349      387     
bma:BMAA0090 putative lipoprotein                                  584      479     0.304      322     
lma:LMJF_27_0380 putative nucleoporin                             1556      475     0.287      602     
bxe:Bxe_B0516 putative lipoprotein                                 573      472     0.298      530     
mdm:139190025 glycine-rich cell wall structural protein            497      470     0.343      475     
cdi:DIP1836 collagen-like repeat protein                           262      468     0.396      192     
rha:RHA1_ro06644 translation initiation factor IF-2     K02519     980      467     0.307      371     
pde:Pden_2124 Hemolysin-type calcium-binding region                946      462     0.277      687     
cit:107174697 glycine-rich cell wall structural protein            432      458     0.357      415     
rcu:8263715 glycine-rich cell wall structural protein 1            379      456     0.357      359     
bps:BPSS1974 putative lipoprotein                                  572      451     0.283      538     
dra:DR_0458 hypothetical protein                                   839      443     0.251      690     
aor:AO090005001359 unnamed protein product; von Willebr           1014      441     0.284      693     
afm:AFUA_8G06780 extracellular proline rich protein                359      440     0.316      386     
vpa:VPA1357 hypothetical protein                                  1622      435     0.265      731     
rpa:TX73_001105 OmpA family protein                                689      434     0.294      523     
ser:SERP0719 cell wall surface anchor family protein               824      422     0.243      692     
cgl:Cgl1985 Translation initiation factor 2 (GTPase)    K02519    1004      422     0.324      343     
lla:L84260 unknown protein                                        1441      418     0.336      420     
tth:TT_C0447 prephenate dehydrogenase                              493      416     0.333      393     
bja:blr0521 ORF_ID:blr0521; hypothetical protein                   745      416     0.266      560     
mab:MAB_4284c Hypothetical protein                                 687      410     0.276      434     
kla:KLLA0_E14543g uncharacterized protein                         1224      404     0.231      654     
ljo:LJ_1839 hypothetical protein                                  1814      381     0.242      763     
reh:H16_B0055 Glycine-rich protein                                 504      376     0.321      371     
bpe:BP1201 tracheal colonization factor precursor       K12682     647      364     0.308      295     
pai:PAE0850 paREP2b                                               2785      357     0.279      606     
gvi:glr1305 ORF_ID:glr1305; unknown protein                        540      353     0.286      490     
cal:CAALFM_C301260CA hypothetical protein                          725      351     0.235      620     
cne:CNE03390 hypothetical protein                                  498      345     0.232      535     
rsp:RSP_0058 FliK, flagellar hook-length control protei K02414     699      334     0.250      627     
xac:XAC2318 pseudouridylate synthase                    K06178     550      334     0.352      247     
llm:llmg_2086 hypothetical serine/threonine-rich protei           1617      332     0.264      367     
sme:SM_b21548 hypothetical protein                                2174      331     0.266      680     
xom:XOO2030 pseudouridylate synthase                    K06178     546      326     0.360      228     
bfr:BF1918 hypothetical protein                                    784      314     0.307      326     
ccr:CC_3055 hypothetical protein                                   738      311     0.270      644     
rru:Rru_A0531 hypothetical protein                                 588      305     0.262      621     
rso:RSp0803 putative hemagglutinin-related signal pepti            667      305     0.268      555     
efa:EF2090 hypothetical protein                                    285      297     0.484      93      
dvu:DVU_0508 translation initiation factor IF-2         K02519    1079      296     0.275      400     
blo:BL1616 translation initiation factor If-2           K02519     954      292     0.298      265     
lpl:lp_2578 cell surface adherence protein,collagen-bin            705      288     0.366      191     
mle:ML1556 initiation factor IF-2                       K02519     924      288     0.333      240     
ddd:Dda3937_02943 type III secreted protein                        569      286     0.273      396     
syn:slr1403 integrin alpha- and beta4- subunit domain h           3016      282     0.336      226     
xfa:XF_0818 endo-1,4-beta-glucanase                     K01179     592      281     0.384      138     
mta:Moth_0776 Flagellar hook-length control protein     K02414     536      278     0.274      405     
eba:ebA4680 hypothetical protein, INTERPRO suggestion:             452      276     0.305      233     
atu:Atu0689 ribosomal large subunit pseudouridine synth K06178     669      274     0.311      331     
ana:all2793 unknown protein                                        681      270     0.333      234     
sao:SAOUHSC_02798 hypothetical protein                  K14195    1627      267     0.246      769     
hma:rrnAC3448 unknown                                              410      267     0.282      241     
lcb:LCABL_13420 Hypothetical serine/threonine-rich prot           1039      264     0.264      349     
rle:RL3927 conserved hypothetical protein                          752      262     0.227      585     
pae:PA1874 hypothetical protein                         K20276    2468      262     0.223      707     
sce:YMR047C FG-nucleoporin NUP116                       K14297    1113      250     0.235      567     
mca:MCA2928 hypothetical protein                                   253      232     0.317      230     
pma:Pro_0013 RNA-binding protein, RRM domain                       252      229     0.367      166     
psb:Psyr_3089 Hemolysin-type calcium-binding region:hem           2689      228     0.251      447     
aci:ACIAD1854 putative phage-related protein                       469      224     0.309      178     
pfa:PF3D7_1240600 erythrocyte membrane protein 1, PfEMP K13850    2359      223     0.272      232     
lil:LA_0943 translation initiation factor IF-2          K02519     863      223     0.322      214     
apl:APL_0104 autotransporter adhesin                    K21449    3154      219     0.246      395     
avn:Avin_24180 Flagellar hook-length control protein    K02414     461      217     0.290      310     
bme:BMEII1039 tRNA pseudouridine synthase a             K06178     565      212     0.332      208     
pst:PSPTO_4124 conserved protein of unknown function               252      211     0.331      172     
bmf:BAB2_0198 High mobility group proteins HMG-I and HM K06178     581      210     0.332      208     
bms:BRA0206 RNA pseudouridylate synthase family protein K06178     598      210     0.332      208     
ag:AFV52191 (R)-2-aza-beta-tyrosine adenylation enzyme  K21228    1171      209     0.261      398     
nme:NMB1415 iron-regulated protein FrpC                           1829      200     0.227      705     
acb:A1S_1073 Hemolysin-type calcium-binding region                3298      198     0.248      415     
ngo:NGO_1379 energy transducer TonB                     K03832     283      198     0.298      188     
xcc:XCC2063 adsorption protein                                     386      198     0.293      249     
eca:ECA2112 type III effector protein                              479      197     0.243      296     
spo:2541137 protein wwm2                                           273      195     0.427      96      
eam:EAMY_2970 Nuclear pore complex protein Nup98-Nup96             388      192     0.263      380     
hal:VNG_1983H hypothetical protein                                 494      187     0.255      466     
mmp:MMP1194 Collagen triple helix repeat:Surface protei            682      185     0.411      73      
tde:TDE_2694 conserved hypothetical protein                        740      183     0.301      173     
ppu:PP_2561 putative secreted hemolysin-type calcium-bi           3608      183     0.235      379     
cte:CT2019 photosystem P840 reaction center iron-sulfur K08941     231      180     0.321      134     
ret:RHE_CH01416 putative peptidoglycan binding protein             683      179     0.258      380     
seo:STM14_5049 putative phage tail fiber protein H                 581      173     0.323      189     
stm:STM4200 putative phage tail fiber protein H                    581      173     0.323      189     
smar:SM39_pSMC1_20 putative conjugal transfer protein,  K07344     553      168     0.249      289     
syf:Synpcc7942_2119 RNA methyltransferase TrmH, group 3 K03218     519      168     0.298      205     
syc:syc1973_d probable tRNA/rRNA methyltransferase      K03218     519      168     0.298      205     
son:SO_0311 uncharacterized radical SAM protein YgiQ               786      157     0.318      154     
bth:BT_2486 hypothetical protein                                  1016      150     0.330      94      
ape:APE_0840 hypothetical protein                                  421      143     0.329      149     
sgb:WQO_33890 hypothetical protein                      K21182     871      140     0.277      292     
hvo:HVO_A0523 UPF0219 family protein                               522      136     0.244      398     
cac:CA_C3309 Predicted membrane protein                            588      133     0.213      460     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]