SSDB Best Search Result

Entry:nnu:104597679 (192 a.a.)
Name:putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
KO:K11128 H/ACA ribonucleoprotein complex subunit 1

Search Result : 235 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
csv:101221716 putative H/ACA ribonucleoprotein complex  K11128     194     1177     0.878      197     
vvi:100245323 putative H/ACA ribonucleoprotein complex  K11128     188     1163     0.876      194     
cit:102619891 putative H/ACA ribonucleoprotein complex  K11128     197     1135     0.869      198     
rcu:8276508 putative H/ACA ribonucleoprotein complex su K11128     194     1135     0.869      199     
osa:4350782 putative H/ACA ribonucleoprotein complex su K11128     196     1108     0.839      199     
gmx:100799823 putative H/ACA ribonucleoprotein complex  K11128     195     1097     0.810      200     
nta:107805678 H/ACA ribonucleoprotein complex subunit 1 K11128     189     1059     0.832      196     
mtr:25498984 putative H/ACA ribonucleoprotein complex s K11128     202     1055     0.814      204     
zma:100273853 putative H/ACA ribonucleoprotein complex  K11128     196     1043     0.814      199     
sly:101246000 putative H/ACA ribonucleoprotein complex  K11128     194     1019     0.812      202     
ath:AT3G03920 H/ACA ribonucleoprotein complex, subunit  K11128     202     1017     0.779      204     
sot:102586015 putative H/ACA ribonucleoprotein complex  K11128     191     1007     0.805      200     
ppp:112282177 H/ACA ribonucleoprotein complex subunit 1 K11128     213      982     0.727      216     
mdm:103436546 putative H/ACA ribonucleoprotein complex  K11128     179      935     0.782      193     
cre:CHLRE_13g567850v5 uncharacterized protein           K11128     220      888     0.664      217     
gga:422697 H/ACA ribonucleoprotein complex subunit 1 is K11128     228      820     0.645      203     
clv:102092259 H/ACA ribonucleoprotein complex subunit 1 K11128     220      810     0.640      200     
tgu:115495021 H/ACA ribonucleoprotein complex subunit 1 K11128     217      808     0.644      205     
cjc:100389616 H/ACA ribonucleoprotein complex subunit 1 K11128     220      805     0.651      195     
dne:112984125 H/ACA ribonucleoprotein complex subunit 1 K11128     212      801     0.634      205     
pif:PITG_15652 H/ACA ribonucleoprotein complex subunit, K11128     277      799     0.648      193     
hsa:54433 H/ACA ribonucleoprotein complex subunit 1     K11128     217      797     0.651      195     
ptr:461433 H/ACA ribonucleoprotein complex subunit 1    K11128     226      797     0.651      195     
apla:101794249 H/ACA ribonucleoprotein complex subunit  K11128     219      795     0.634      202     
xtr:496698 H/ACA ribonucleoprotein complex subunit 1    K11128     218      792     0.635      203     
mcc:697982 H/ACA ribonucleoprotein complex subunit 1    K11128     217      791     0.643      199     
smo:SELMODRAFT_266974 hypothetical protein              K11128     191      790     0.678      199     
cin:100181113 H/ACA ribonucleoprotein complex subunit 1 K11128     198      789     0.668      190     
mmu:68147 H/ACA ribonucleoprotein complex subunit 1     K11128     231      789     0.636      198     
cpoc:100714195 H/ACA ribonucleoprotein complex subunit  K11128     217      788     0.635      200     
mdo:100009876 GAR1 ribonucleoprotein                    K11128     238      786     0.609      215     
xla:108706707 H/ACA ribonucleoprotein complex subunit 1 K11128     228      785     0.631      203     
ola:101172885 H/ACA ribonucleoprotein complex subunit 1 K11128     220      783     0.644      194     
cge:103159924 H/ACA ribonucleoprotein complex subunit 1 K11128     221      782     0.634      202     
ocu:100358023 H/ACA ribonucleoprotein complex subunit 1 K11128     215      781     0.626      203     
rno:499709 H/ACA ribonucleoprotein complex subunit 1    K11128     226      779     0.617      214     
cfa:610515 H/ACA ribonucleoprotein complex subunit 1    K11128     210      772     0.636      195     
ptex:113434784 H/ACA ribonucleoprotein complex subunit  K11128     213      771     0.622      209     
amj:102559543 GAR1 ribonucleoprotein                    K11128     274      771     0.623      204     
spu:592267 H/ACA ribonucleoprotein complex subunit 1    K11128     211      770     0.598      209     
ssc:100516629 H/ACA ribonucleoprotein complex subunit 1 K11128     210      770     0.635      197     
ecb:100064344 H/ACA ribonucleoprotein complex subunit 1 K11128     213      769     0.632      204     
pmur:107298570 H/ACA ribonucleoprotein complex subunit  K11128     209      766     0.623      207     
fca:101083587 H/ACA ribonucleoprotein complex subunit 1 K11128     209      762     0.636      195     
nve:5511173 H/ACA ribonucleoprotein complex subunit 1 i K11128     200      756     0.629      197     
ani:ANIA_10712 hypothetical protein                     K11128     197      755     0.637      190     
oas:101119047 H/ACA ribonucleoprotein complex subunit 1 K11128     211      752     0.626      198     
dre:393950 H/ACA ribonucleoprotein complex subunit 1    K11128     225      749     0.595      215     
tru:101079836 H/ACA ribonucleoprotein complex subunit 1 K11128     219      747     0.611      203     
bta:515057 H/ACA ribonucleoprotein complex subunit 1    K11128     211      747     0.624      205     
fvr:FVEG_05048 H/ACA ribonucleoprotein complex subunit  K11128     210      732     0.607      196     
maj:MAA_00608 H/ACA ribonucleoprotein complex, subunit  K11128     205      730     0.605      200     
cel:CELE_Y66H1A.4 putative H/ACA ribonucleoprotein comp K11128     244      729     0.589      209     
tgo:7897366 Gar1 protein RNA binding region protein     K11128     210      728     0.596      203     
ncr:NCU16757 H/ACA ribonucleoprotein complex subunit 1  K11128     220      726     0.609      202     
tps:THAPSDRAFT_22276 predicted protein                  K11128     197      724     0.604      197     
rfq:117030585 H/ACA ribonucleoprotein complex subunit 1 K11128     192      720     0.612      196     
kla:KLLA0_F21604g uncharacterized protein               K11128     219      717     0.599      192     
tre:TRIREDRAFT_3671 hypothetical protein                K11128     208      716     0.600      185     
fgr:FGSG_06372 hypothetical protein                     K11128     217      713     0.607      191     
uma:UMAG_04573 putative H/ACA snoRNP pseudouridylase su K11128     227      712     0.599      197     
dme:Dmel_CG4038 Gar1 ribonucleoprotein                  K11128     237      710     0.561      198     
bmor:101746301 probable H/ACA ribonucleoprotein complex K11128     232      707     0.583      199     
mgr:MGG_03556 H/ACA ribonucleoprotein complex subunit 1 K11128     216      704     0.585      193     
yli:2909577 H/ACA ribonucleoprotein complex subunit GAR K11128     201      697     0.615      187     
ppa:PAS_chr2-1_0648 Protein component of the H/ACA snoR K11128     201      696     0.585      193     
sce:YHR089C H/ACA snoRNP pseudouridylase subunit GAR1   K11128     205      691     0.592      191     
cne:CNI03970 small nucleolar RNP protein, putative      K11128     205      688     0.594      207     
tca:100142234 H/ACA ribonucleoprotein complex subunit 1 K11128     215      684     0.576      198     
spo:2540705 H/ACA snoRNP pseudouridylase subunit Gar1   K11128     194      681     0.586      186     
cal:CAALFM_C111550WA H/ACA snoRNP pseudouridylase subun K11128     186      667     0.588      182     
aag:23687533 H/ACA ribonucleoprotein complex subunit 1  K11128     227      666     0.558      190     
afm:AFUA_4G13690 snoRNP protein (gar1)                  K11128     198      655     0.562      203     
aga:1281648 probable H/ACA ribonucleoprotein complex su K11128     224      650     0.532      205     
ame:413686 H/ACA ribonucleoprotein complex subunit 1    K11128     200      641     0.545      198     
ddi:DDB_G0279013 Gar1 family protein                    K11128     230      618     0.543      219     
tbr:Tb927.4.470 snoRNP protein gar1, putative           K11128     229      606     0.519      210     
lma:LMJF_34_4290 putative nucleolar protein family A    K11128     220      594     0.512      211     
tcr:510687.120 snoRNP protein gar1                      K11128     239      537     0.489      188     
ehi:EHI_194040 snoRNP protein gar1                      K11128     181      440     0.457      175     
aor:AO090009000202 unnamed protein product; H/ACA small K11128     272      414     0.543      127     
tva:4754779 box H/ACA snoRNA binding                               177      409     0.428      180     
gla:GL50803_008794 putative Nucleolar GAR1-like protein K11128     183      322     0.343      169     
pfa:PF3D7_1309500 H/ACA ribonucleoprotein complex subun K11128     209      319     0.543      92      
scl:sce5233 PE_PGRS                                                563      270     0.342      190     
vg:80540061 macacine gammaherpesvirus 13; hypothetical             543      256     0.369      198     
mea:Mex_1p3178 putative transcriptional regulator, cold K03704     278      246     0.364      195     
reu:Reut_B4586 conserved hypothetical protein                      498      242     0.368      190     
sgr:SGR_5729 putative pseudouridine synthase            K06178     434      241     0.656      61      
pti:PHATRDRAFT_7349 hypothetical protein                K11128      87      238     0.523      65      
cdn:BN940_01611 hypothetical protein                    K06872     365      234     0.635      63      
mmi:MMAR_0601 conserved hypothetical membrane protein              561      222     0.648      54      
aci:ACIAD2373 host factor I for bacteriophage Q beta re K03666     174      222     0.610      59      
ecu:ECU01_1360 uncharacterized protein                  K11128     182      212     0.322      171     
ksk:KSE_17150 hypothetical protein                                 739      209     0.331      166     
sml:Smlt3261 ribosomal large subunit pseudouridine synt K06178     542      209     0.344      189     
nar:Saro_3142 cold-shock DNA-binding protein family     K03704     267      207     0.640      50      
pma:Pro_0013 RNA-binding protein, RRM domain                       252      206     0.554      65      
mtu:Rv1441c PE-PGRS family protein PE_PGRS26                       491      206     0.323      189     
ssy:SLG_37910 cold shock protein CspA                              266      204     0.688      48      
smm:Smp_044280.1 putative fibrillarin                   K14563     331      204     0.565      69      
kfl:Kfla_0361 RNA binding S1 domain protein             K06959     815      203     0.487      78      
avn:Avin_39120 hypothetical protein                                414      202     0.569      65      
sen:SACE_1087 PE-PGRS family protein                               487      202     0.325      191     
oih:OB0471 hypothetical conserved protein                          246      199     0.444      90      
xac:XAC2318 pseudouridylate synthase                    K06178     550      198     0.567      67      
bxe:Bxe_A0786 Putative lipoprotein                                 351      197     0.640      50      
nca:Noca_2983 hypothetical protein                                 778      196     0.688      48      
bja:bll6557 ORF_ID:bll6557; unknown protein                        451      195     0.585      53      
ase:ACPL_5336 Transcriptional accessory protein         K06959     839      194     0.456      90      
stp:Strop_1906 Tetratricopeptide TPR_4                             753      194     0.354      206     
sme:SM_b21521 hypothetical exported protein, glycine-ri            152      194     0.585      53      
sco:SCO1122 putative regulatory protein                            278      193     0.500      60      
mtc:MT3615.3 PE_PGRS family protein                               1217      193     0.316      212     
amd:AMED_5237 hypothetical protein                                 687      191     0.321      212     
mul:MUL_3741 N-term PE-PGRS family protein                         398      191     0.328      192     
sjp:SJA_C1-31240 cold shock protein CspA                           272      190     0.635      52      
mlo:mlr4566 glycine-rich cell wall protein                         243      188     0.556      54      
sgu:SGLAU_29265 putative secreted protein                          295      186     0.537      54      
sno:Snov_2756 conserved hypothetical protein                       165      185     0.640      50      
swi:Swit_2901 cold-shock DNA-binding protein family                288      185     0.633      49      
bps:BPSL0547 single-strand binding protein              K03111     184      185     0.566      53      
mxa:MXAN_4864 hypothetical protein                                 626      184     0.614      57      
plu:plu2639 unnamed protein product; Some similarities             157      184     0.596      47      
sur:STAUR_5849 30S ribosomal protein S18                K02963     146      183     0.600      55      
mva:Mvan_2459 PE_PGRS family protein                               557      183     0.339      192     
sma:SAVERM_4195 putative membrane protein                          749      182     0.556      54      
ana:all2793 unknown protein                                        681      182     0.331      181     
ctt:CtCNB1_4720 RNA-binding protein RNP-3                          164      181     0.577      52      
npu:Npun_F6382 efflux transporter, RND family, MFP subu K02005     540      181     0.351      111     
syf:Synpcc7942_2119 RNA methyltransferase TrmH, group 3 K03218     519      181     0.345      203     
syc:syc1973_d probable tRNA/rRNA methyltransferase      K03218     519      181     0.345      203     
rer:RER_16040 hypothetical protein                                 373      180     0.305      190     
xfa:XF_0818 endo-1,4-beta-glucanase                     K01179     592      180     0.527      55      
reh:H16_B0055 Glycine-rich protein                                 504      179     0.328      192     
dds:Ddes_0711 hypothetical protein                                 524      178     0.367      98      
gpo:GPOL_c23840 putative membrane protein                          490      177     0.500      64      
pde:Pden_4853 hypothetical protein                                 208      177     0.402      87      
cgl:Cgl1156 Superfamily II DNA and RNA helicases        K05592     732      177     0.330      182     
ddd:Dda3937_02943 type III secreted protein                        569      176     0.316      196     
rha:RHA1_ro01889 conserved hypothetical protein                    538      176     0.640      50      
gox:GOX1455 ATP-dependent RNA helicase                  K05592     603      176     0.420      81      
brh:RBRH_00317 ATP-dependent RNA helicase                          630      175     0.313      131     
pjd:Pjdr2_5976 Peptidoglycan-binding domain 1 protein              336      175     0.564      55      
acb:A1S_3785 hypothetical protein                       K03666     168      175     0.508      59      
sil:SPO1637 single-strand binding protein               K03111     180      175     0.558      52      
pfr:PFREUD_22900 Transcriptional regulator PadR family             293      174     0.514      72      
phe:Phep_0666 DEAD/DEAH box helicase domain protein     K05592     625      173     0.339      183     
bma:BMA3093 single-strand binding protein               K03111     199      173     0.547      53      
sro:Sros_8873 hypothetical protein                                 196      172     0.554      56      
cdi:DIP1018 DEAD-box helicase                           K05592     680      172     0.332      184     
bpe:BP0168 putative membrane protein                    K06872     300      172     0.387      93      
gvi:gll1391 ORF_ID:gll1391                                         122      172     0.574      47      
pst:PSPTO_4237 lipoprotein, putative                               152      171     0.336      131     
ret:RHE_CH02572 hypothetical conserved protein                     317      170     0.560      50      
rpa:TX73_012520 BA14K family protein                               209      170     0.492      63      
lmo:lmo0866 ATP-dependent RNA helicase                  K05592     520      170     0.290      176     
azc:AZC_2901 type III fibronectin                                  743      168     0.277      191     
bhe:BH09250 hypothetical genomic island protein                    642      168     0.332      202     
xcc:XCC0784 glycine rich protein                        K06872     305      168     0.574      54      
apl:APL_0340 hypothetical protein                       K06872     279      167     0.437      71      
csa:Csal_0812 protein of unknown function DUF477        K06872     260      166     0.607      56      
lin:lin0859 similar to ATP-dependent RNA helicase       K05592     516      166     0.289      173     
dra:DR_1616 conserved hypothetical protein                         341      166     0.478      67      
ccyc:SCMU_38260 hypothetical protein                               227      165     0.516      64      
psb:Psyr_3971 lipoprotein, putative                                156      165     0.326      132     
ppu:PP_2172 conserved exported protein of unknown funct            147      165     0.344      96      
sct:SCAT_3146 single-strand DNA-binding protein         K03111     188      164     0.547      53      
ttm:Tthe_1999 protein of unknown function DUF477        K06872     269      164     0.580      50      
vvu:VV2_0147 Cold-shock DEAD-box protein A              K05592     641      164     0.540      63      
rle:RL2863 conserved hypothetical protein                          468      163     0.461      76      
ccr:CC_2027 hypothetical protein                                   888      163     0.525      61      
rcp:RCAP_rcc01805 single-stranded DNA-binding protein-1 K03111     175      162     0.349      106     
eba:ebA5805 hypothetical protein                        K06872     319      162     0.622      45      
zmo:ZMO1417 DEAD/DEAH box helicase domain protein       K11927     458      161     0.432      81      
lpl:lp_0520 ATP-dependent RNA helicase                  K05592     528      160     0.429      77      
mab:MAB_0376 Conserved hypothetical protein (peptidase?            386      159     0.446      65      
vpa:VPA0608 ATP-dependent RNA helicase DeaD             K05592     643      159     0.633      49      
fps:FP0342 Putative RNA-binding protein RbpA                       133      158     0.473      55      
gme:Gmet_2631 RNA-binding protein                                  134      158     0.464      69      
smar:SM39_pSMC1_45 hypothetical protein                 K07735     243      157     0.361      108     
anb:ANA_C20266 hypothetical protein                                389      157     0.540      50      
mca:MCA0409 putative lipoprotein                                   356      157     0.487      76      
eam:EAMY_1224 putative ATP-dependent RNA helicase rhlE  K11927     470      156     0.485      68      
pmu:PM0783 unknown                                      K06872     254      156     0.375      80      
rso:RSc0663 putative of unknown function duf477; transm K06872     279      155     0.463      80      
esa:ESA_03554 hypothetical protein                      K05592     635      154     0.582      55      
vfi:VF_A0384 ATP-dependent RNA helicase                 K05592     634      154     0.313      195     
msm:MSMEG_2627 hypothetical protein                                282      153     0.566      53      
xau:Xaut_3864 ribonuclease R                            K12573     776      152     0.372      86      
xom:XOO3546 glycine rich protein                        K06872     285      151     0.558      52      
btk:BT9727_2927 conserved hypothetical protein, glycine            109      151     0.492      63      
mar:MAE_58900 hypothetical protein                                 529      150     0.549      51      
pdi:BDI_2906 ATP-dependent RNA helicase                 K05592     610      150     0.302      162     
tfu:Tfu_3094 Single-strand binding protein              K03111     182      150     0.395      76      
pfl:PFL_1354 conserved hypothetical protein             K06872     251      150     0.591      44      
efa:EF0846 ATP-dependent RNA helicase, DEAD/DEAH box fa K05592     536      150     0.295      183     
vch:VC_A0804 ATP-dependent RNA helicase DeaD            K05592     663      150     0.492      61      
rsp:RSP_1793 single-strand binding protein              K03111     173      149     0.373      110     
cst:CLOST_0222 conserved exported protein of unknown fu K06872     282      148     0.289      159     
gsu:GSU1478 protein of unknown function DUF477          K06872     289      148     0.565      46      
kpn:KPN_03570 cold-shock DeaD box ATP-dependent RNA hel K05592     643      147     0.313      198     
ag:AAA22075 23S rRNA (adenine2085-N6)-methyltransferase K00561     340      146     0.403      72      
cvi:CV_0383 ATP-dependent RNA helicase                  K11927     472      145     0.424      66      
zga:ZOBELLIA_982 Conserved hypothetical membrane protei K06872     263      144     0.322      146     
syn:sll1764 unknown protein                                        144      144     0.447      76      
abo:ABO_1881 conserved domain protein                   K06872     237      143     0.569      51      
mse:Msed_0669 nucleic acid binding, OB-fold, tRNA/helic            158      142     0.591      44      
atu:Atu1512 single-strand DNA binding protein           K03111     173      142     0.522      46      
enc:ECL_02938 putative ATP-dependent RNA helicase RhlE  K11927     450      141     0.407      59      
dvu:DVU_0503 polyribonucleotide nucleotidyltransferase  K00962     760      141     0.518      56      
cte:CT1277 conserved hypothetical protein                          197      140     0.432      74      
ava:Ava_2454 hypothetical protein                                  113      139     0.386      57      
bms:BR1821 conserved hypothetical protein               K06872     267      139     0.639      36      
rru:Rru_A3462 cold-shock DNA-binding protein family                210      138     0.446      56      
hel:HELO_2451 ATP-dependent RNA helicase RhlE           K11927     433      137     0.439      57      
nfa:NFA_55730 putative single-strand binding protein    K03111     178      137     0.462      52      
tex:Teth514_0291 protein of unknown function DUF477     K06872     265      135     0.550      40      
bfr:BF0914 conserved hypothetical protein               K06872     306      135     0.562      48      
tth:TT_C1883 hypothetical conserved protein                        241      135     0.475      61      
pgi:PG_0361 conserved domain protein                    K06872     435      134     0.677      31      
mba:Mbar_A0829 conserved hypothetical protein                      165      133     0.470      66      
ape:APE_0786.1 small nucleolar RNP protein Gar1p                   133      133     0.284      134     
afn:Acfer_0224 protein of unknown function DUF477       K06872     259      132     0.632      38      
lcb:LCABL_27880 Putative uncharacterized protein precur K06872     286      132     0.588      34      
bvu:BVU_2539 conserved hypothetical protein             K06872     306      129     0.528      53      
sai:Saci_0975 single strand DNA binding protein                    146      126     0.426      61      
hpj:jhp_1208 putative                                              117      124     0.482      56      
hpy:HP_1288 predicted coding region HP1288                         132      123     0.482      56      
mmg:MTBMA_c12810 H/ACA RNA-protein complex component Ga K07569      92      118     0.303      66      
tko:TK2286 snoRNP component, Gar1 homolog               K07569     115      117     0.263      114     
mth:MTH_886 conserved protein                           K07569      92      112     0.298      57      
hvo:HVO_1108 tRNA/rRNA pseudouridine synthase complex p K07569      74      110     0.239      71      
mma:MM_1771 hypothetical protein                        K07569      89      100     0.313      67      
hal:VNG_1366H hypothetical protein                      K07569      75       97     0.283      60      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]